Transitions during cephalopod life history: the role of habitat, environment, functional morphology and behaviour.

Cephalopod life cycles generally share a set of stages that take place in different habitats and are adapted to specific, though variable, environmental conditions. Throughout the lifespan, individuals undertake a series of brief transitions from one stage to the next. Four transitions were identified: fertilisation of eggs to their release from the female (1), from eggs to paralarvae (2), from paralarvae to subadults (3) and from subadults to adults (4). An analysis of each transition identified that the changes can be radical (i.e. involving a range of morphological, physiological and behavioural phenomena and shifts in habitats) and critical (i.e. depending on environmental conditions essential for cohort survival). This analysis underlines that transitions from eggs to paralarvae (2) and from paralarvae to subadults (3) present major risk of mortality, while changes in the other transitions can have evolutionary significance. This synthesis suggests that more accurate evaluation of the sensitivity of cephalopod populations to environmental variation could be achieved by taking into account the ontogeny of the organisms. The comparison of most described species advocates for studies linking development and ecology in this particular group.

Predicting glycogen concentration in the foot muscle of abalone using near infrared reflectance spectroscopy (NIRS).

Near infrared reflectance spectroscopy (NIRS) was used to predict glycogen concentrations in the foot muscle of cultured abalone. NIR spectra of live, shucked and freeze-dried abalones were modelled against chemically measured glycogen data (range: 0.77-40.9% of dry weight (DW)) using partial least squares (PLS) regression. The calibration models were then used to predict glycogen concentrations of test abalone samples and model robustness was assessed from coefficient of determination of the validation (R2(val)) and standard error of prediction (SEP) values. The model for freeze-dried abalone gave the best prediction (R2(val) 0.97, SEP=1.71), making it suitable for quantifying glycogen. Models for live and shucked abalones had R2(val) of 0.86 and 0.90, and SEP of 3.46 and 3.07 respectively, making them suitable for producing estimations of glycogen concentration. As glycogen is a taste-active component associated with palatability in abalone, this study demonstrated the potential of NIRS as a rapid method to monitor the factors associated with abalone quality.

Protein synthesis in a solitary benthic cephalopod, the Southern dumpling squid (Euprymna tasmanica).

Rates of protein synthesis were measured in the whole body and tissues of southern dumpling squid Euprymna tasmanica to validate the use of a flooding-dose of (3)H phenylalanine for the measurement of protein synthesis with different size squid and to make a preliminary investigation into the effects of feeding regime. In smaller (2.8+/-0.5 g, mean+/-SE) and larger (14.8+/-2.2 g) squid whole body fractional rates of protein synthesis were 9.45+/-1.21 and 1.49+/-0.29% d(-1), respectively. Differences in total whole body protein content meant there was no difference in absolute rates of whole body protein synthesis between the larger and smaller squid. In larger squid, fractional rates of protein synthesis were significantly higher in the digestive gland (9.24+/-1.63% d(-1)) than in the arm tissue (1.43+/-0.31% d(-1)), which were significantly higher than in the anterior (0.56+/-0.13% d(-1)) and posterior (0.36+/-0.04% d(-1)) mantle. In smaller squid there were no differences in protein synthesis between tissues and high individual variation, due to differences in feeding, was a likely cause. Consequently, the effect of feeding regime on protein synthesis was compared between two groups of individually held squid: daily-feeding and minimal-feeding squid. The daily-feeding squid had significantly higher feed intake, gained mass and had a significantly higher growth rate than the minimal-feeding squid which lost mass. Whole body protein synthesis was significantly higher in the daily-feeding squid as was the protein content of the digestive gland, anterior and posterior mantle. There were few other differences in indices of protein metabolism. Individual squid showed differences in growth and protein metabolism, and there were significant relationships between growth rate and both rates of protein synthesis and protein degradation. Thus, higher individual growth was a consequence of increased protein synthesis, decreased protein degradation and, therefore, increased efficiency of retaining synthesised protein.

Do conventional cooking methods alter concentrations of per- and polyfluoroalkyl substances (PFASs) in seafood?

Per-and poly-fluoroalkyl substances (PFASs) are bioaccumulative chemicals of emerging concern. Some PFASs accumulate in seafood, and can contribute to dietary exposure. Previous work has suggested cooking seafood decreases concentrations of neutral organic contaminants, however, previous studies dealing with PFASs have shown conflicting results. In this study, the potential changes of PFAS concentrations as a result of boiling, frying and baking are systematically examined. Blue Swimmer Crab (Portunus armatus), Dusky Flathead (Platycephalus fuscus) and School Prawn (Metapenaeus macleayi) were obtained from near a known PFAS point source and a reference location (affected by diffuse sources). Raw and cooked samples were analysed for commonly found PFASs. Of 23 target analytes, PFOS was the most frequently detected compound. PFOS, PFHxS and PFOA concentrations in School Prawn effectively doubled after boiling, and PFOS increased when Dusky Flathead was baked. There was no significant difference in PFOS concentration when Dusky Flathead was fried, or when the Blue Swimmer Crab was boiled. PFHxS and PFOA concentrations in Blue Swimmer Crab effectively halved after boiling. Increase in PFAS concentrations possibly arise from mass loss during the cooking process. Our data show that cooking does not consistently reduce PFAS concentrations, and cannot mitigate dietary exposure.

Population genetic signatures of a climate change driven marine range extension.

Shifts in species distribution, or 'range shifts', are one of the most commonly documented responses to ocean warming, with important consequences for the function and structure of ecosystems, and for socio-economic activities. Understanding the genetic signatures of range shifts can help build our knowledge of the capacity of species to establish and persist in colonised areas. Here, seven microsatellite loci were used to examine the population connectivity, genetic structure and diversity of Octopus tetricus, which has extended its distribution several hundred kilometres polewards associated with the southwards extension of the warm East Australian Current along south-eastern Australia. The historical distribution and the range extension zones had significant genetic differences but levels of genetic diversity were comparable. The population in the range extension zone was sub-structured, contained relatively high levels of self-recruitment and was sourced by migrants from along the entire geographic distribution. Genetic bottlenecks and changes in population size were detected throughout the range extension axis. Persistent gene flow from throughout the historical zone and moderate genetic diversity may buffer the genetic bottlenecks and favour the range extension of O. tetricus. These characteristics may aid adaptation, establishment, and long-term persistence of the population in the range extension zone.

Depuration of perfluoroalkyl substances from the edible tissues of wild-caught invertebrate species.

Detection and quantification of poly- and perfluoroalkyl substances (PFASs) in aquatic organisms is increasing, particularly for saltwater species. Depuration can remove PFASs from the tissues of some species once they are removed from the contaminant source, but it is not known if this process occurs for saltwater crustaceans. Such information is important for managing human health risks for exploited migratory species following exposure. We present the results of a depuration trial for School Prawn (Metapenaeus macleayi) and Mud Crab (Scylla serrata), two commercially important crustaceans in Australia. Perfluorooctane sulfonate (PFOS), perfluorohexane sulfonate (PFHxS), and perfluorooctanoic acid (PFOA) were present in samples of both species collected following exposure under natural conditions in contaminated estuaries. Depuration was tested in uncontaminated water for 33days. PFOA was present at levels close to LOR in both species, and was not detected after 4.5h and 72h in School Prawn and Mud Crab respectively. PFHxS was rapidly depurated by School Prawn, and had a depuration half-life of 5.7h. PFOS was also depurated by School Prawn, with a depuration half-life of 158.5h. PFHxS and PFOS concentrations were highly variable in Mud Crab both at the start, and during the depuration experiment, and a depuration model could not be fitted to the data. For School Prawn, depuration of total PFASs to the relevant screening value for protection of human health (9.1µgkg-1) occurred within 7.1h. Rapid depuration of PFASs in School Prawn indicates that human health risks associated with consumption may decrease as this species migrates away from the contamination source. Further research is required to better understand the relationships between contaminant load and life-history characteristics (such as growth, reproduction, and moult cycle) in Mud Crab, and future work should target broader time frames for depuration in this species.

Evaluation of short-term fallowing as a strategy for the management of recurring organic enrichment under salmon cages.

Rotation of cages within fish farm leases and the subsequent fallowing of areas of seabed is commonly used to allow recovery of infaunal communities following periods of organic enrichment. To investigate the effect of different background environmental conditions on recovery response, two Atlantic salmon (Salmo salar) fish farm sites in southeast Tasmania were sampled over two commercial fallowing cycles. Despite similar stocking levels and feed input there were significant differences in the way in which sediment at each farm responded to the cessation of fish stocking. Sediments at both farms showed some improvement in the community structure over a three month fallow period, but the community structure only recovered to that present before stocking not to that at the reference sites. The similarity of the impact sites to the reference sites increased from ca. 25% to 31% at one site and 11% to 27% at the other after fallowing. Rate and extent of recovery were affected by farm location, initial impact of the sediments, and length of fallow period. Initial recovery was faster at the more sheltered site than at the more exposed site, possibly reflecting differences in environmental resilience with the more sheltered location better able to assimilate organic inputs. Accordingly general fallowing management protocols may need to be adapted to reflect differences between sites. The findings of this study suggest that the recovery response of benthic communities can be predicted once baseline conditions are understood.

Personality traits in dumpling squid (Euprymna tasmanica): context-specific traits and their correlation with biological characteristics.

Personality traits are a major class of behavioral variation often observed within populations of animals. However, little is known of the integration between personality and an individual's underlying biology. To address this, the authors measured personality traits in squid (Euprymna tasmanica) in 2 contexts while also describing trait correlates with biological parameters. Four traits (shy avoidance- bold aggression, activity, bury persistence, and reactivity) were reliably measured; however, trait expression between contexts was not correlated and thus was context-specific. Trait variation was not a function of gender or of somatic or reproductive condition but was explained partially by a squid's sexual maturity and its size. Results are discussed in terms of the interplay between personality variation and resulting life history strategies in animals.

Assessment of long term change in sediment condition after organic enrichment: defining recovery.

Sediment condition at an Atlantic salmon (Salmo salar) culture site in S.E. Tasmania, Australia was evaluated to determine the rate and extent of recovery after removal of farmed fish. By local standards the cage sediment at the start of this survey was markedly degraded but comparison with results from impact studies in Scotland, Canada and Norway suggests that the sediments were considerably less impacted than in northern temperate areas. The impact at the cages diminished rapidly with both time and distance; after only 2 months conditions were markedly improved. The macrobenthos indicated a slower recovery than chemical measures, after 36 months the benthic faunal community structure under the cages still differed from reference conditions even though other sediment measures had recovered. This study highlighted two other key issues in relation to monitoring and management of sediment recovery. First, techniques used to determine impact may not be appropriate for evaluation of recovery. Second, establishment of local baseline standards is extremely important to ensure appropriate evaluation of both impact and recovery.

Habitat characteristics predicting distribution and abundance patterns of scallops in D'Entrecasteaux Channel, Tasmania.

Habitat characteristics greatly influence the patterns of distribution and abundance in scallops, providing structure for the settlement of spat and influencing predation risk and rates of survival. Establishing scallop-habitat relationships is relevant to understanding the ecological processes that regulate scallop populations and to managing critical habitats. This information is particularly relevant for the D'Entrecasteaux Channel, south-eastern Tasmania (147.335 W, 43.220 S), a region that has supported significant but highly variable scallop production over many years, including protracted periods of stock collapse. Three species of scallops are present in the region; the commercial scallop Pecten fumatus, the queen scallop Equichlamys bifrons, and the doughboy scallop Mimachlamys asperrima. We used dive surveys and Generalized Additive Modelling to examine the relationship between the distribution and abundance patterns of each species and associated habitat characteristics. The aggregated distribution of each species could be predicted as a function of sediment type and species-specific habitat structural components. While P. fumatus was strongly associated with finer sediments and E. bifrons with coarse grain sediments, M. asperrima had a less selective association, possibly related to its ability to attach on a wide range of substrates. Other habitat characteristics explaining P. fumatus abundance were depth, Asterias amurensis abundance, shell and macroalgae cover. Equichlamys bifrons was strongly associated with macroalgae and seagrass cover, whereas M. asperrima abundance was greatly explained by sponge cover. The models define a set of relationships from which plausible hypotheses can be developed. We propose that these relationships are mediated by predation pressure as well as the specific behavioural characteristics of each species. The findings also highlight the specific habitat characteristics that are relevant for spatial management and habitat restoration plans.

Body size, growth and life span: implications for the polewards range shift of Octopus tetricus in south-eastern Australia.

Understanding the response of any species to climate change can be challenging. However, in short-lived species the faster turnover of generations may facilitate the examination of responses associated with longer-term environmental change. Octopus tetricus, a commercially important species, has undergone a recent polewards range shift in the coastal waters of south-eastern Australia, thought to be associated with the southerly extension of the warm East Australian Current. At the cooler temperatures of a polewards distribution limit, growth of a species could be slower, potentially leading to a bigger body size and resulting in a slower population turnover, affecting population viability at the extreme of the distribution. Growth rates, body size, and life span of O. tetricus were examined at the leading edge of a polewards range shift in Tasmanian waters (40°S and 147°E) throughout 2011. Octopus tetricus had a relatively small body size and short lifespan of approximately 11 months that, despite cooler temperatures, would allow a high rate of population turnover and may facilitate the population increase necessary for successful establishment in the new extended area of the range. Temperature, food availability and gender appear to influence growth rate. Individuals that hatched during cooler and more productive conditions, but grew during warming conditions, exhibited faster growth rates and reached smaller body sizes than individuals that hatched into warmer waters but grew during cooling conditions. This study suggests that fast growth, small body size and associated rapid population turnover may facilitate the range shift of O. tetricus into Tasmanian waters.

Assembly rules of reef corals are flexible along a steep climatic gradient.

Coral reefs, one of the world's most complex and vulnerable ecosystems, face an uncertain future in coming decades as they continue to respond to anthropogenic climate change, overfishing, pollution, and other human impacts [1, 2]. Traditionally, marine macroecology is based on presence/absence data from taxonomic checklists or geographic ranges, providing a qualitative overview of spatial shifts in species richness that treats rare and common species equally [3, 4]. As a consequence, regional and long-term shifts in relative abundances of individual taxa are poorly understood. Here we apply a more rigorous quantitative approach to examine large-scale spatial variation in the species composition and abundance of corals on midshelf reefs along the length of Australia's Great Barrier Reef, a biogeographic region where species richness is high and relatively homogeneous [5]. We demonstrate that important functional components of coral assemblages "sample" space differently at 132 sites separated by up to 1740 km, leading to complex latitudinal shifts in patterns of absolute and relative abundance. The flexibility in community composition that we document along latitudinal environmental gradients indicates that climate change is likely to result in a reassortment of coral reef taxa rather than wholesale loss of entire reef ecosystems.