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1.
J Biol Chem ; 298(12): 102596, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36257405

RESUMO

Novel vaccination strategies are crucial to efficiently control tuberculosis, as proposed by the World Health Organization under its flagship program "End TB Strategy." However, the emergence of drug-resistant strains of Mycobacterium tuberculosis (Mtb), particularly in those coinfected with HIV-AIDS, constitutes a major impediment to achieving this goal. We report here a novel vaccination strategy that involves synthesizing a formulation of an immunodominant peptide derived from the Acr1 protein of Mtb. This nanoformulation in addition displayed on the surface a toll-like receptor-2 ligand to offer to target dendritic cells (DCs). Our results showed an efficient uptake of such a concoction by DCs in a predominantly toll-like receptor-2-dependent pathway. These DCs produced elevated levels of nitric oxide, proinflammatory cytokines interleukin-6, interleukin-12, and tumor necrosis factor-α, and upregulated the surface expression of major histocompatibility complex class II molecules as well as costimulatory molecules such as CD80 and CD86. Animals injected with such a vaccine mounted a significantly higher response of effector and memory Th1 cells and Th17 cells. Furthermore, we noticed a reduction in the bacterial load in the lungs of animals challenged with aerosolized live Mtb. Therefore, our findings indicated that the described vaccine triggered protective anti-Mtb immunity to control the tuberculosis infection.


Assuntos
Mycobacterium tuberculosis , Tuberculose , Animais , Células Dendríticas , Epitopos , Ligantes , Mycobacterium tuberculosis/metabolismo , Receptor 2 Toll-Like/metabolismo , Tuberculose/prevenção & controle , Tuberculose/microbiologia , Camundongos
2.
Int J Phytoremediation ; 25(6): 717-727, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-35917513

RESUMO

Plant assisted bioremediation of petroleum hydrocarbon contaminated soil is considered an effective green technology whereby accelerated degradation occurs due to converged effect of microorganisms and plants. However, survival and growth of microbes and plants under stress conditions is challenging task for success of the technology. In this study, plant growth promoting bacteria containing 1-aminocyclopropane-1-carboxylate (ACC)-deaminase activity and tolerance to petroleum hydrocarbon contamination were used in association with alfalfa for bioremediation of petroleum hydrocarbon contaminated soil. Eight pre-isolated bacterial isolates from soil having previous history of petroleum contamination were used in convergence with alfalfa on sand soil which was artificially contaminated (10 g crude oil per kg-1 of coarse textured soil). Combined effect of bacteria and plants on the degradation of petroleum hydrocarbons under controlled conditions of light and temperature was observed for a period of 60 days. The results of the study revealed that four bacterial isolates Bacillus subtilis strain PM32Y, Bacillus cereus strain WZ3S1, Bacillus sp. strain SM73 and Bacillus sp. strain WZ3S3 in association with alfalfa significantly degraded petroleum hydrocarbons. The most significant biodegradation (47%) of petroleum hydrocarbons was recorded in the experimental unit receiving PM32Y inoculation in association with alfalfa. Biodegradation of petroleum hydrocarbons was 33% with alone inoculation (without alfalfa) of PM32Y. The study revealed that combined use of bacteria and alfalfa plant is more efficient than alone application of either bacteria or plants for degradation of petroleum hydrocarbons.


This study provides the evidence for phytoremediation and significant degradation of petroleum hydrocarbons by using plant growth promoting bacteria (PGPB), containing 1-aminocyclopropane-1-carboxylate deaminase (ACC-deaminase) in association with alfalfa (Medicago sativa L.). The most significant biodegradation of petroleum hydrocarbons was recorded with a new combination of Bacillus subtilis strain PM32Y in association with alfalfa.


Assuntos
Petróleo , Poluentes do Solo , Petróleo/metabolismo , Biodegradação Ambiental , Medicago sativa/metabolismo , Solo , Hidrocarbonetos/metabolismo , Plantas/metabolismo , Bactérias/metabolismo , Poluentes do Solo/metabolismo , Microbiologia do Solo
3.
Physiol Plant ; 172(2): 463-476, 2021 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-32949405

RESUMO

Rhizobacteria containing 1-aminocyclopropane-1-carboxylic acid-deaminase (ACC-deaminase) and exopolysaccharides (EPS) activity are important to induce stress tolerance in plants. The present study was conducted to screen and characterize plant growth-promoting rhizobacteria (PGPR) with ACC-deaminase and EPS-producing activity for improving maize growth under drought stress. Eighty-five rhizobacterial strains were isolated from the rain-fed areas, among those 69 isolates were able to utilize ACC and 31 strains were found positive for EPS production. These strains containing ACC-deaminase and/or EPS-producing activity were subjected to drought tolerance assay by inducing water stress in media using polyethylene glycol 6000. Based on results of the drought tolerance bioassay, 12 most prominent strains were selected to evaluate their growth-promoting abilities in maize under water-stressed conditions by conducting jar trial. The impact of strains on maize growth parameters was variable. Strains with co-existence of ACC-deaminase and EPS-producing activity showed comparatively better results than those with either ACC-deaminase or EPS-producing activity only. These strains were also significantly better in improving the plant physiological parameters including photosynthesis rate, stomatal conductance, vapor pressure, water-use efficiency and transpiration rate. The strain D3 with co-existence of ACC-deaminase and EPS-producing activity was significantly better in colonizing maize roots, improving plant growth and physiological parameters. The strain was named as Bacillus velezensis strain D3 (accession number MT367633) as confirmed through results of 16S rRNA partial gene sequencing. It is concluded that the strains with co-existence of ACC-deaminase and EPS-producing activity could be better suited for improving crop growth and physiology under drought stress.


Assuntos
Secas , Zea mays , Bacillus , Carbono-Carbono Liases , Raízes de Plantas , RNA Ribossômico 16S , Microbiologia do Solo
4.
BMC Infect Dis ; 20(1): 677, 2020 Sep 17.
Artigo em Inglês | MEDLINE | ID: mdl-32942991

RESUMO

BACKGROUND: Approximately 80% - 90% of individuals infected with latent Mycobacterium tuberculosis (Mtb) remain protected throughout their life-span. The release of unique, latent-phase antigens are known to have a protective role in the immune response against Mtb. Although the BCG vaccine has been administered for nine decades to provide immunity against Mtb, the number of TB cases continues to rise, thereby raising doubts on BCG vaccine efficacy. The shortcomings of BCG have been associated with inadequate processing and presentation of its antigens, an inability to optimally activate T cells against Mtb, and generation of regulatory T cells. Furthermore, BCG vaccination lacks the ability to eliminate latent Mtb infection. With these facts in mind, we selected six immunodominant CD4 and CD8 T cell epitopes of Mtb expressed during latent, acute, and chronic stages of infection and engineered a multi-epitope-based DNA vaccine (C6). RESULT: BALB/c mice vaccinated with the C6 construct along with a BCG vaccine exhibited an expansion of both CD4 and CD8 T cell memory populations and augmented IFN-γ and TNF-α cytokine release. Furthermore, enhancement of dendritic cell and macrophage activation was noted. Consequently, illustrating the elicitation of immunity that helps in the protection against Mtb infection; which was evident by a significant reduction in the Mtb burden in the lungs and spleen of C6 + BCG administered animals. CONCLUSION: Overall, the results suggest that a C6 + BCG vaccination approach may serve as an effective vaccination strategy in future attempts to control TB.


Assuntos
Vacina BCG/imunologia , Epitopos de Linfócito T , Tuberculose/prevenção & controle , Vacinas de DNA/imunologia , Animais , Antígenos de Bactérias/imunologia , Vacina BCG/genética , Vacina BCG/farmacologia , Linfócitos T CD4-Positivos/imunologia , Linfócitos T CD8-Positivos/imunologia , Epitopos de Linfócito T/genética , Feminino , Memória Imunológica , Interferon gama/metabolismo , Tuberculose Latente/prevenção & controle , Camundongos Endogâmicos BALB C , Camundongos Endogâmicos C57BL , Mycobacterium tuberculosis/imunologia , Tuberculose/imunologia , Fator de Necrose Tumoral alfa/metabolismo , Vacinas de DNA/farmacologia
5.
BMC Microbiol ; 19(1): 64, 2019 03 20.
Artigo em Inglês | MEDLINE | ID: mdl-30894125

RESUMO

BACKGROUND: Mycobacterium tuberculosis (Mtb) is an etiological agent of tuberculosis (TB). Tuberculosis is a mounting problem worldwide. The only available vaccine BCG protects the childhood but not adulthood form of TB. Therefore, efforts are made continuously to improve the efficacy of BCG by supplementing it with other therapies. Consequently, we explored the possibility of employing Mycobacterium immunogenum (Mi) to improve BCG potential to protect against Mtb. RESULTS: We report here the genome mining, comparative genomics, immunological and protection studies employing strain CD11_6 of Mi. Mycobacterium immunogenum was isolated from duodenal mucosa of a celiac disease patient. The strain was whole genome sequenced and annotated for identification of virulent genes and other traits that may make it suitable as a potential vaccine candidate. Virulence profile of Mi was mapped and compared with two other reference genomes i.e. virulent Mtb strain H37Rv and vaccine strain Mycobacterium bovis (Mb) AFF2122/97. This comparative analysis revealed that Mi is less virulent, as compared to Mb and Mtb, and contains comparable number of genes encoding for the antigenic proteins that predict it as a probable vaccine candidate. Interestingly, the animals vaccinated with Mi showed significant augmentation in the generation of memory T cells and reduction in the Mtb burden. CONCLUSION: The study signifies that Mi has a potential to protect against Mtb and therefore can be a future vaccine candidate against TB.


Assuntos
Genoma Bacteriano , Ativação Linfocitária , Mycobacteriaceae/genética , Linfócitos T/imunologia , Tuberculose/imunologia , Animais , Feminino , Genômica , Humanos , Memória Imunológica , Camundongos Endogâmicos C57BL , Mycobacteriaceae/patogenicidade , Mycobacterium bovis/genética , Mycobacterium bovis/patogenicidade , Mycobacterium tuberculosis/genética , Mycobacterium tuberculosis/patogenicidade , Fatores de Virulência/genética , Sequenciamento Completo do Genoma
6.
J Transl Med ; 16(1): 279, 2018 10 11.
Artigo em Inglês | MEDLINE | ID: mdl-30305097

RESUMO

BACKGROUND: The clinical trials conducted at Chingleput India suggest that BCG fails to protect against tuberculosis (TB) in TB-endemic population. Recent studies advocate that non-tuberculous mycobacteria and latent Mycobacterium tuberculosis (Mtb) infection interferes in the antigen processing and presentation of BCG in inducing protective immunity against Mtb. Thereby, indicating that any vaccine that require extensive antigen processing may not be efficacious in TB-endemic zones. Recently, we have demonstrated that the vaccine candidate L91, which is composed of lipidated promiscuous MHC-II binder epitope, derived from latency associated Acr1 antigen of Mtb is immunogenic in the murine and Guinea pig models of TB and conferred better protection than BCG against Mtb. METHODS: In this study, we have used a multi-stage based bi-epitope vaccine, namely L4.8, comprising of MHC-I and MHC-II binding peptides of active (TB10.4) and latent (Acr1) stages of Mtb antigens, respectively. These peptides were conjugated to the TLR-2 agonist Pam2Cys. RESULTS: L4.8 significantly elicited both CD8 T cells and CD4 T cells immunity, as evidenced by increase in the enduring polyfunctional CD8 T cells and CD4 T cells. L4.8 efficiently declined Mtb-burden and protected animals better than BCG and L91, even at the late stage of Mtb infection. CONCLUSIONS: The BCG-L4.8 prime boost strategy imparts a better protection against TB than the BCG alone. This study emphatically denotes that L4.8 can be a promising future vaccine candidate for controlling active and latent TB.


Assuntos
Vacina BCG/imunologia , Linfócitos T CD4-Positivos/imunologia , Linfócitos T CD8-Positivos/imunologia , Epitopos/imunologia , Antígenos de Histocompatibilidade Classe II/imunologia , Antígenos de Histocompatibilidade Classe I/imunologia , Lipídeos/química , Mycobacterium tuberculosis/imunologia , Animais , Feminino , Imunidade , Imunização , Memória Imunológica , Interferon gama/metabolismo , Interleucina-17/metabolismo , Camundongos Endogâmicos BALB C , Linfócitos T Citotóxicos/imunologia , Tuberculose/imunologia
7.
J Transl Med ; 15(1): 201, 2017 10 06.
Artigo em Inglês | MEDLINE | ID: mdl-28985739

RESUMO

BACKGROUND: The current BCG vaccine induces only short-term protection against Mycobacterium tuberculosis (Mtb), suggesting its failure to generate long-lasting memory T cells. Previously, we have demonstrated that a self-adjuvanting peptide of Mtb (L91), successfully generated enduring memory Th1 cells. Consequently, we investigated if L91 was able to recuperate BCG potency in perpetuating the generation of memory T cells and protection against Mtb infected mice. METHODS: In the present study, we evaluated the potency of a self adjuvanting Mtb peptide vaccine L91 in invigorating BCG immune response against Mtb in mice. Female BALB/c mice were immunized with BCG. Later, they were boosted twice with L91 or an antigenically irrelevant lipidated influenza virus hemagglutinin peptide (LH). Further, PBMCs obtained from BCG vaccinated healthy subjects were cultured in vitro with L91. T cell responses were determined by surface markers and intracellular cytokine staining. Secretion of cytokines was estimated in the culture supernatants (SNs) by ELISA. RESULTS: Compared to the BCG-vaccinated controls, L91 booster significantly enhanced the percentage of memory Th1 cells and Th17 cells and reduced the mycobacterial burden in BCG primed and L91-boosted (BCG-L91) group, even after 229 days of BCG vaccination. Further, substantial augmentation in the central (CD44hiCD62LhiCD127hi) and effector memory (CD44hiCD62LloCD127lo) CD4 T cells was detected. Furthermore, greater frequency of polyfunctional Th1 cells (IFN-γ+TNF-α+) and Th17 cells (IFN-γ+IL-17A+) was observed. Importantly, BCG-L91 successfully prevented CD4 T cells from exhaustion by decreasing the expression of PD-1 and Tim-3. Additionally, augmentation in the frequency of Th1 cells, Th17 cells and memory CD4 T cells was observed in the PBMCs of the BCG-vaccinated healthy individuals following in vitro stimulation with L91. CONCLUSIONS: Our study demonstrated that L91 robustly reinvigorate BCG potency to invoke enduring protection against Mtb. This novel vaccination stratagem involving BCG-priming followed by L91-boosting can be a future prophylactic measure to control TB.


Assuntos
Vacina BCG/imunologia , Imunidade , Memória Imunológica , Lipídeos/química , Mycobacterium tuberculosis/imunologia , Peptídeos/farmacologia , Substâncias Protetoras/farmacologia , Linfócitos T Reguladores/imunologia , Animais , Células Apresentadoras de Antígenos/metabolismo , Proliferação de Células/efeitos dos fármacos , Feminino , Humanos , Imunidade/efeitos dos fármacos , Memória Imunológica/efeitos dos fármacos , Ativação Linfocitária/efeitos dos fármacos , Camundongos Endogâmicos BALB C , Mycobacterium tuberculosis/efeitos dos fármacos , NF-kappa B/metabolismo , Óxido Nítrico Sintase Tipo II/metabolismo , Fenótipo , Receptores de Quimiocinas/metabolismo , Linfócitos T Reguladores/efeitos dos fármacos , Células Th1/efeitos dos fármacos , Células Th1/imunologia , Células Th17/efeitos dos fármacos , Células Th17/imunologia , Tuberculose/imunologia , Tuberculose/microbiologia
8.
J Sci Food Agric ; 97(15): 5139-5145, 2017 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-28436040

RESUMO

BACKGROUND: Limited information is available about the effectiveness of biochar with plant growth-promoting rhizobacteria (PGPR) and compost. A greenhouse study was conducted to evaluate the effect of biochar in combination with compost and PGPR (Pseudomonas fluorescens) for alleviating water deficit stress. Both inoculated and un-inoculated cucumber seeds were sown in soil treated with biochar, compost and biochar + compost. Three water levels - field capacity (D0), 75% field capacity (D1) and 50% field capacity (D2) - were maintained. RESULTS: The results showed that water deficit stress significantly suppressed the growth of cucumber; however, synergistic use of biochar, compost and PGPR mitigated the negative impact of stress. At D2, the synergistic use of biochar, compost and PGPR caused significant increases in shoot length, shoot biomass, root length and root biomass, which were respectively 88, 77, 89 and 74% more than in the un-inoculated control. Significant improvements in chlorophyll and relative water contents as well as reduction in leaf electrolyte leakage demonstrated the effectiveness of this approach. Moreover, the highest population of P. fluorescens was observed where biochar and compost were applied together. CONCLUSION: These results suggest that application of biochar with PGPR and/or compost could be an effective strategy for enhancing plant growth under stress. © 2017 Society of Chemical Industry.


Assuntos
Produção Agrícola/métodos , Cucumis sativus/crescimento & desenvolvimento , Pseudomonas fluorescens/fisiologia , Solo/química , Biomassa , Carvão Vegetal/análise , Carvão Vegetal/metabolismo , Produção Agrícola/instrumentação , Cucumis sativus/metabolismo , Cucumis sativus/microbiologia , Folhas de Planta/crescimento & desenvolvimento , Folhas de Planta/metabolismo , Pseudomonas fluorescens/crescimento & desenvolvimento , Microbiologia do Solo , Água/análise , Água/metabolismo
9.
Arch Microbiol ; 198(4): 379-87, 2016 May.
Artigo em Inglês | MEDLINE | ID: mdl-26860842

RESUMO

Phosphate solubilization, 1-aminocyclopropane-1-carboxylic acid (ACC)-deaminase activity and production of siderophores and indole acetic acid (IAA) are well-known traits of plant growth-promoting rhizobacteria (PGPR). Here we investigated the expression of these traits as affected by salinity for three PGPR strains (Pseudomonas fluorescens, Bacillus megaterium and Variovorax paradoxus) at two salinity levels [2 and 5 % NaCl (w/v)]. Among the three strains, growth of B. megaterium was the least affected by high salinity. However, P. fluorescens was the best strain for maintaining ACC-deaminase activity, siderophore and IAA production under stressed conditions. V. paradoxus was the least tolerant to salts and had minimal growth and low PGPR trait expression under salt stress. Results of experiment examining the impact of bacterial inoculation on cucumber growth at three salinity levels [1 (normal), 7 and 10 dS m(-1)] revealed that P. fluorescens also had good rhizosphere competence and was the most effective for alleviating the negative impacts of salinity on cucumber growth. The results suggest that in addition to screening the PGPR regarding their effect on growth under salinity, PGPR trait expression is also an important aspect that may be useful for selecting the most promising PGPR bacterial strains for improving plant tolerance to salinity stress.


Assuntos
Fenômenos Fisiológicos Bacterianos , Cucumis sativus/microbiologia , Cucumis sativus/fisiologia , Tolerância ao Sal/fisiologia , Microbiologia do Solo , Bacillus megaterium/fisiologia , Carbono-Carbono Liases , Cucumis sativus/efeitos dos fármacos , Cucumis sativus/crescimento & desenvolvimento , Regulação Bacteriana da Expressão Gênica , Genes Bacterianos/genética , Ácidos Indolacéticos/metabolismo , Pseudomonas fluorescens/fisiologia , Salinidade , Sideróforos/genética , Cloreto de Sódio/farmacologia
10.
Ecotoxicol Environ Saf ; 124: 42-49, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26454074

RESUMO

Biological treatment of azo dyes commonly requires a combined anaerobic-aerobic process in which initial decolorization is achieved by reductive cleavage of azo bonds on the parent molecule. The present study was conducted to examine the relative importance of co-substrates for driving reductive decolorization of azo dyes by Shewanella sp. strain IFN4 using whole cells and enzyme assays. Results showed that the dye decolorization by strain IFN4 was faster in medium containing 1gL(-1) yeast extract (YE) as compared to nine other co-substrates. Moreover, only YE stimulated azoreductase activity (increased from 1.32 to 4.19U/mg protein). Increasing the level of YE up to 8gL(-)(1) resulted into 81% decolorization of the dye in 1h along with an increase in azoreductase activity up to 6.16U/mg protein. Among the components of YE, only riboflavin stimulated the decolorization process as well as enzyme activity. Moreover, strain IFN4 demonstrated flavin reductase activity, and a significant correlation (r(2)=0.98) between flavin reduction and dye reduction by this strain emphasized the involvement of flavin compounds in the decolorization process. The results of this study show that YE serves both as a source of reducing equivalents and an electron shuttle for catalyzing dye reduction.


Assuntos
Compostos Azo/metabolismo , Corantes/metabolismo , Misturas Complexas/metabolismo , Shewanella/metabolismo , Leveduras/química , NADH NADPH Oxirredutases/metabolismo , Nitrorredutases , Oxirredução
11.
Commun Biol ; 7(1): 45, 2024 01 05.
Artigo em Inglês | MEDLINE | ID: mdl-38182666

RESUMO

Accurate lipid annotation is crucial for understanding the role of lipids in health and disease and identifying therapeutic targets. However, annotating the wide variety of lipid species in biological samples remains challenging in untargeted lipidomic studies. In this work, we present a lipid annotation workflow based on LC-MS and MS/MS strategies, the combination of four bioinformatic tools, and a decision tree to support the accurate annotation and semi-quantification of the lipid species present in lung tissue from control mice. The proposed workflow allowed us to generate a lipid lung-based ATLAS (LiLA), which was then employed to unveil the lipidomic signatures of the Mycobacterium tuberculosis infection at two different time points for a deeper understanding of the disease progression. This workflow, combined with manual inspection strategies of MS/MS data, can enhance the annotation process for lipidomic studies and guide the generation of sample-specific lipidome maps. LiLA serves as a freely available data resource that can be employed in future studies to address lipidomic alterations in mice lung tissue.


Assuntos
Ascomicetos , Espectrometria de Massas em Tandem , Animais , Camundongos , Fluxo de Trabalho , Biologia Computacional , Lipídeos
12.
EBioMedicine ; 105: 105196, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38880068

RESUMO

BACKGROUND: The ability to detect evidence of Mycobacterium tuberculosis (Mtb) infection within human tissues is critical to the study of Mtb physiology, tropism, and spatial distribution within TB lesions. The capacity of the widely-used Ziehl-Neelsen (ZN) staining method for identifying Mtb acid-fast bacilli (AFB) in tissue is highly variable, which can limit detection of Mtb bacilli for research and diagnostic purposes. Here, we sought to circumvent these limitations via detection of Mtb mRNA and secreted antigens in human tuberculous tissue. METHODS: We adapted RNAscope, an RNA in situ hybridisation (RISH) technique, to detect Mtb mRNA in ante- and postmortem human TB tissues and developed a dual ZN/immunohistochemistry staining approach to identify AFB and bacilli producing antigen 85B (Ag85B). FINDINGS: We identified Mtb mRNA within intact and disintegrating bacilli as well as extrabacillary mRNA. Mtb mRNA was distributed zonally within necrotic and non-necrotic granulomas. We also found Mtb mRNA within, and adjacent to, necrotic granulomas in ZN-negative lung tissue and in Ag85B-positive bronchiolar epithelium. Intriguingly, we observed accumulation of Mtb mRNA and Ag85B in the cytoplasm of host cells. Notably, many AFB were negative for Ag85B staining. Mtb mRNA was observed in ZN-negative antemortem lymph node biopsies. INTERPRETATION: RNAscope and dual ZN/immunohistochemistry staining are well-suited for identifying subsets of intact Mtb and/or bacillary remnants in human tissue. RNAscope can identify Mtb mRNA in ZN-negative tissues from patients with TB and may have diagnostic potential in complex TB cases. FUNDING: Wellcome Leap Delta Tissue Program, Wellcome Strategic Core Award, the National Institutes of Health (NIH, USA), the Mary Heersink Institute for Global Health at UAB, the UAB Heersink School of Medicine.


Assuntos
Antígenos de Bactérias , Mycobacterium tuberculosis , RNA Mensageiro , Humanos , Mycobacterium tuberculosis/genética , Antígenos de Bactérias/genética , Antígenos de Bactérias/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Hibridização In Situ , Tuberculose/microbiologia , RNA Bacteriano/genética , Imuno-Histoquímica , Granuloma/microbiologia , Granuloma/metabolismo , Pulmão/microbiologia , Pulmão/patologia , Pulmão/metabolismo
13.
Arch Biochem Biophys ; 540(1-2): 101-16, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24184422

RESUMO

Sodium dodecyl sulfate, a biological membrane mimetic, can be used to study the conversion of globular proteins into amyloid fibrils in vitro. Using multiple approaches, the effect of SDS was examined on stem bromelain (SB), a widely recognized therapeutic protein. SB is known to exist as a partially folded intermediate at pH 2.0, situation also encountered in the gastrointestinal tract (its site of absorption). In the presence of sub-micellar SDS concentration (500-1000 µM), this intermediate was found to exhibit great propensity to form large-sized ß-sheeted aggregates with fibrillar morphology, the hall marks of amyloid structure. We also observed inhibition of fibrillation by two naphthalene-based compounds, ANS and bis-ANS. While bis-ANS significantly inhibited fibril formation at 50 µM, ANS did so at relatively higher concentration (400 µM). Alcohols, but not salts, were found to weaken the inhibitory action of these compounds suggesting the possible involvement of hydrophobic interactions in their binding to protein. Besides, isothermal titration calorimetry and molecular docking studies suggested that inhibition of fibrillation by these naphthalene derivatives is mediated not just through hydrophobic forces, but also by disruption of π-π interactions between the aromatic residues together with the inter-polypeptide chain repulsion among negatively charged ANS/bis-ANS bound SB.


Assuntos
Bromelaínas/química , Naftalenos/química , Naftalenos/farmacologia , Multimerização Proteica/efeitos dos fármacos , Dodecilsulfato de Sódio/análogos & derivados , Dodecilsulfato de Sódio/farmacologia , Álcoois/farmacologia , Bromelaínas/metabolismo , Soluções Tampão , Relação Dose-Resposta a Droga , Concentração de Íons de Hidrogênio , Interações Hidrofóbicas e Hidrofílicas , Micelas , Simulação de Acoplamento Molecular , Estrutura Secundária de Proteína , Estrutura Terciária de Proteína
14.
Heliyon ; 9(7): e17816, 2023 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-37483786

RESUMO

This study was undertaken to see how microbial consortia influenced maize development and yield under salt-affected conditions. The efficacy of the pre-isolated bacterial strains Burkholderia phytofirmans, Bacillussubtilis, Enterobacter aerogenes, and Pseudomonas syringae and Pseudomonas fluorescens to decrease the detrimental effects of salt on maize was tested in four distinct combinations using Randomized Complete Block Design with three replicates. The results revealed that these strains were compatible and collaborated synergistically, with an 80% co-aggregation percentage under salt-affected conditions. Following that, these strains were tested for their ability to increase maize growth and yield under salt-affected field conditions. The photosynthetic rate (11-50%), relative water content (10-34%), and grain yield (13-21%) of maize were all increased by these various combinations. However, when Burkholderia phytofirmans, Enterobacter aerogenes and Pseudomonas fluorescens were combined, the greatest increase was seen above the un-inoculated control. Furthermore, as compared to the un-inoculated control, the same combination resulted in a 1.5-fold increase in catalase and a 2.0-fold increase in ascorbate concentration. These findings showed that a multi-strain consortium might boost maize's total yield response as a result of better growth under salt stress.

15.
Nat Commun ; 14(1): 5472, 2023 09 06.
Artigo em Inglês | MEDLINE | ID: mdl-37673914

RESUMO

Mycobacterium tuberculosis (Mtb) disrupts glycolytic flux in infected myeloid cells through an unclear mechanism. Flux through the glycolytic pathway in myeloid cells is inextricably linked to the availability of NAD+, which is maintained by NAD+ salvage and lactate metabolism. Using lung tissue from tuberculosis (TB) patients and myeloid deficient LDHA (LdhaLysM-/-) mice, we demonstrate that glycolysis in myeloid cells is essential for protective immunity in TB. Glycolytic myeloid cells are essential for the early recruitment of multiple classes of immune cells and IFNγ-mediated protection. We identify NAD+ depletion as central to the glycolytic inhibition caused by Mtb. Lastly, we show that the NAD+ precursor nicotinamide exerts a host-dependent, antimycobacterial effect, and that nicotinamide prophylaxis and treatment reduce Mtb lung burden in mice. These findings provide insight into how Mtb alters host metabolism through perturbation of NAD(H) homeostasis and reprogramming of glycolysis, highlighting this pathway as a potential therapeutic target.


Assuntos
NAD , Tuberculose , Animais , Camundongos , Homeostase , Células Mieloides , Niacinamida/farmacologia , Glicólise , Lactato Desidrogenase 5
16.
bioRxiv ; 2023 Oct 05.
Artigo em Inglês | MEDLINE | ID: mdl-37873458

RESUMO

Rationale: Accurate TB diagnosis is hampered by the variable efficacy of the widely-used Ziehl-Neelsen (ZN) staining method to identify Mycobacterium tuberculosis ( Mtb ) acid-fast bacilli (AFB). Here, we sought to circumvent this current limitation through direct detection of Mtb mRNA. Objectives: To employ RNAscope to determine the spatial distribution of Mtb mRNA within tuberculous human tissue, to appraise ZN-negative tissue from confirmed TB patients, and to provide proof-of-concept of RNAscope as a platform to inform TB diagnosis and Mtb biology. Methods: We examined ante- and postmortem human TB tissue using RNAscope to detect Mtb mRNA and a dual ZN/immunohistochemistry staining approach to identify AFB and bacilli producing antigen 85B (Ag85B). Measurements and main results: We adapted RNAscope for Mtb and identified intact and disintegrated Mtb bacilli and intra- and extracellular Mtb mRNA. Mtb mRNA was distributed zonally within necrotic and non-necrotic granulomas. We also found Mtb mRNA within, and adjacent to, necrotic granulomas in ZN-negative lung tissue and in Ag85B-positive bronchial epithelium. Intriguingly, we observed accumulation of Mtb mRNA and Ag85B in the cytoplasm of host cells. Notably, many AFB were negative for Ag85B staining. Mtb mRNA was observed in ZN-negative antemortem lymph node biopsies. Conclusions: RNAscope has diagnostic potential and can guide therapeutic intervention as it detects Mtb mRNA and morphology in ZN-negative tissues from TB patients, and Mtb mRNA in ZN-negative antemortem biopsies, respectively. Lastly, our data provide evidence that at least two phenotypically distinct populations of Mtb bacilli exist in vivo .

17.
Microb Ecol ; 64(4): 1008-17, 2012 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-22639075

RESUMO

Plant growth-promoting rhizobacteria (PGPR) are common components of the rhizosphere, but their role in adaptation of plants to extreme environments is not yet understood. Here, we examined rhizobacteria associated with ancient clones of Larrea tridentata in the Mohave desert, including the 11,700-year-old King Clone, which is oldest known specimen of this species. Analysis of unculturable and culturable bacterial community by PCR-DGGE revealed taxa that have previously been described on agricultural plants. These taxa included species of Proteobacteria, Bacteroidetes, and Firmicutes that commonly carry traits associated with plant growth promotion, including genes encoding aminocyclopropane carboxylate deaminase and ß-propeller phytase. The PGPR activities of three representative isolates from L. tridentata were further confirmed using cucumber plants to screen for plant growth promotion. This study provides an intriguing first view of the mutualistic bacteria that are associated with some of the world's oldest living plants and suggests that PGPR likely contribute to the adaptation of L. tridentata and other plant species to harsh environmental conditions in desert habitats.


Assuntos
Bactérias/isolamento & purificação , Clima Desértico , Larrea/crescimento & desenvolvimento , Larrea/microbiologia , Desenvolvimento Vegetal , Rizosfera , Bactérias/classificação , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Bacteroidetes/classificação , Bacteroidetes/genética , Bacteroidetes/crescimento & desenvolvimento , Bacteroidetes/isolamento & purificação , Carbono-Carbono Liases/genética , Carbono-Carbono Liases/metabolismo , Cucumis sativus/crescimento & desenvolvimento , Cucumis sativus/microbiologia , Larrea/genética , Larrea/metabolismo , Dados de Sequência Molecular , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , Proteobactérias/classificação , Proteobactérias/genética , Proteobactérias/crescimento & desenvolvimento , Proteobactérias/isolamento & purificação , Análise de Sequência de DNA , Microbiologia do Solo , Simbiose
18.
Front Microbiol ; 13: 958522, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36246246

RESUMO

Owing to inconsistent results of a single bacterial strain, co-inoculation of more than one strain under salinity stress could be a more effective strategy to induce salt tolerance. Co-inoculation of more than one bacterial strain could be more effective due to the presence of several growths promoting traits. This study was conducted to evaluate the effectiveness of multi-strains bacterial consortium to promote wheat growth under salinity stress. Several plant growth promoting rhizobacteria (PGPR) had been isolated and tested for their ability to grow in increasing concentrations of sodium chloride (NaCl). Those rhizobacterial strains having tolerance against salinity were screened to evaluate their ability to promote wheat growth in the presence of salinity by conducting jar trials under axenic conditions. The rhizobacteria with promising results were tested for their compatibility with each other before developing multi-strain inoculum of PGPR. The compatible PGPR strains were characterized, and multi-strain inoculum was then evaluated for promoting wheat growth under axenic conditions at different salinity levels, i.e., 2.1 (normal soil), 6, 12, and 18 dS m-1. The most promising combination was further evaluated by conducting a pot trial in the greenhouse. The results showed that compared to a single rhizobacterial strain, better growth-promoting effect was observed when rhizobacterial strains were co-inoculated. The multi-strain consortium of PGPR caused a significant positive impact on shoot length, root length, shoot fresh weight, and root fresh weight of wheat at the highest salinity level in the jar as well as in the pot trial. Results showed that the multi-strain consortium of PGPR caused significant positive effects on the biochemical traits of wheat by decreasing electrolyte leakage and increasing chlorophyll contents, relative water contents (RWC), and K/Na ratio. It can be concluded that a multi-strain consortium of PGPR (Ensifer adhaerens strain BK-30, Pseudomonas fluorescens strain SN5, and Bacillus megaterium strain SN15) could be more effective to combat the salinity stress owing to the presence of a variety of growth-promoting traits. However, further work is going on to evaluate the efficacy of multi-strain inoculum of PGPR under salt-affected field conditions.

19.
Environ Sci Pollut Res Int ; 29(30): 46118-46126, 2022 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-35165842

RESUMO

The uncontrolled industrialization and unrestricted textile production combined with inappropriate effluent treatment services in developing countries like Pakistan have multiplied the number of harmful effluent discharge. These effluents are enriched with dyes, heavy metal ions, and other hazardous materials that are poisonous and carcinogenic to living organisms. For that reason, the utilization of economic and efficient control techniques against such pollutants is imperative to protect natural resources. The triple algal role for phycoremediation of textile effluent was utilized in this study to make it suitable for irrigation and higher biofuel production. Locally isolated two strains, CKW1 (Spirogyra sp.) and PKS33 (Cladophora sp.), were used to treat the effluent collected from the direct outlets of the textile industries. The treated effluent was then tested for its toxicity and applied to wheat at initial stage grown under axenic conditions to check its effect on wheat (Triticum aestivum L.) vegetative growth and development. Finally, the algal biomass obtained after treatment was subjected to trans-esterification for predicting the amount of biodiesel production. Study outcomes revealed that the algal strains were able to decolorize the effluent entirely within 96-120 h. Compared to un-treated textile effluent, the phycoremediated wastewater application to wheat plants enhanced the plant biomass by 80%. Lastly, the production of biodiesel from algal biomass attained after phycoremediation was 35% less to algal biomass obtained under normal growth conditions. It can be concluded that the algal use helps to treat the contaminated effluent and marks them re-usable for irrigating plants and producing biomass which could be utilized for biodiesel production.


Assuntos
Biocombustíveis , Metais Pesados , Biomassa , Têxteis , Triticum , Águas Residuárias
20.
Artigo em Inglês | MEDLINE | ID: mdl-33922303

RESUMO

Soil pollution with heavy metal is a serious problem across the globe and is on the rise due to the current intensification of chemical industry. The leather industry is one of them, discharging chromium (Cr) in huge quantities during the process of leather tanning and polluting the nearby land and water resources, resulting in deterioration of plant growth. In this study, the effects of biochar application at the rate of 3% were studied on four maize cultivars, namely NK-8441, P-1543, NK-8711, and FH-985, grown in two different tannery polluted Kasur (K) and Sialkot (S) soils. Maize plants were harvested at vegetative growth and results showed that Cr toxicity adversely not only affected their growth, physiology, and biochemistry, but also accumulated in their tissues. However, the level of Cr toxicity, accumulation, and its influence on maize cultivars varied greatly in both soils. In this pot experiment, biochar application played a crucial role in lessening the Cr toxicity level, resulting in significant increase in plant height, biomass (fresh and dry), leaf area, chlorophyll pigments, photosynthesis, and relative water content (RWC) over treatment set as a control. However, applied biochar significantly decreased the electrolyte leakage (EL), antioxidant enzymes, lipid peroxidation, proline content, soluble sugars, and available fraction of Cr in soil as well as Cr (VI and III) concentration in root and shoot tissues of maize plant. In addition to this, maize cultivar differences were also found in relation to their tolerance to Cr toxicity and cultivar P-1543 performed better over other cultivars in both soils. In conclusion, biochar application in tannery polluted soils could be an efficient ecofriendly approach to reduce the Cr toxicity and to promote plant health and growth.


Assuntos
Cromo , Poluentes do Solo , Carvão Vegetal , Cromo/análise , Cromo/toxicidade , Poluição Ambiental , Solo , Poluentes do Solo/análise , Poluentes do Solo/toxicidade , Zea mays
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