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1.
World J Microbiol Biotechnol ; 40(8): 249, 2024 Jun 22.
Artigo em Inglês | MEDLINE | ID: mdl-38907753

RESUMO

Tannery effluents contain high amounts of polluting chemicals, such as salts and heavy metals released often to surface waters. New economic and eco-friendly purification methods are needed. Two adsorbing materials and five salt-tolerant fungal isolates from mangrove habitat were studied. Purification experiments were carried out using the pollutant adsorbents biochar and the biomass of vetiver grass (Chrysopogon zizanioides) roots and the fungi Cladosporium cladosporioides, Phomopsis glabrae, Aspergillus niger, Emericellopsis sp., and Scopulariopsis sp., which were isolated from mangrove sediment. They efficacy to reduce pollutants was studied in different combinations. Salinity, turbidity, total dissolved solids, total suspended solids, phenols, nitrogen, ammonia. Biological and chemical oxygen demand (BOD, COD) and several heavy metals were measured. The adsorbents were efficient reducing the pollutants to 15-50% of the original. The efficiency of the combination of biochar and roots was generally at the same level as the adsorbents alone. Some pollutants such as turbidity, COD and ammonium were reduced slightly more by the combination than the adsorbents alone. From all 14 treatments, Emericellopsis sp. with biochar and roots appeared to be the most efficient reducing pollutants to < 10-30%. BOD and COD were reduced to ca 5% of the original. The treatment was efficient in reducing also heavy metals (As, Cd, Cr, Mn Pb, Zn). The fungal species originating from the environment instead of the strains present in the tannery effluent reduced pollutants remarkably and the adsorbents improved the reduction efficiency. However, the method needs development for effluents with high pollutant concentrations to fulfil the environmental regulations.


Assuntos
Biodegradação Ambiental , Biomassa , Carvão Vegetal , Fungos , Metais Pesados , Raízes de Plantas , Poaceae , Curtume , Poluentes Químicos da Água , Carvão Vegetal/química , Poaceae/microbiologia , Raízes de Plantas/microbiologia , Fungos/isolamento & purificação , Fungos/classificação , Águas Residuárias/microbiologia , Águas Residuárias/química , Análise da Demanda Biológica de Oxigênio , Adsorção , Purificação da Água/métodos , Resíduos Industriais/análise , Áreas Alagadas
2.
Molecules ; 28(10)2023 May 12.
Artigo em Inglês | MEDLINE | ID: mdl-37241788

RESUMO

Using the internal transcribed spacer (ITS) region for identification, three strains of Aspergillus terreus were identified and designated AUMC 15760, AUMC 15762, and AUMC 15763 for the Assiut University Mycological Centre culture collection. The ability of the three strains to manufacture lovastatin in solid-state fermentation (SSF) using wheat bran was assessed using gas chromatography-mass spectroscopy (GC-MS). The most potent strain was strain AUMC 15760, which was chosen to ferment nine types of lignocellulosic waste (barley bran, bean hay, date palm leaves, flax seeds, orange peels, rice straw, soy bean, sugarcane bagasse, and wheat bran), with sugarcane bagasse turning out to be the best substrate. After 10 days at pH 6.0 at 25 °C using sodium nitrate as the nitrogen source and a moisture content of 70%, the lovastatin output reached its maximum quantity (18.2 mg/g substrate). The medication was produced in lactone form as a white powder in its purest form using column chromatography. In-depth spectroscopy examination, including 1H, 13C-NMR, HR-ESI-MS, optical density, and LC-MS/MS analysis, as well as a comparison of the physical and spectroscopic data with published data, were used to identify the medication. At an IC50 of 69.536 ± 5.73 µM, the purified lovastatin displayed DPPH activity. Staphylococcus aureus and Staphylococcus epidermidis had MICs of 1.25 mg/mL, whereas Candida albicans and Candida glabrata had MICs of 2.5 mg/mL and 5.0 mg/mL, respectively, against pure lovastatin. As a component of sustainable development, this study offers a green (environmentally friendly) method for using sugarcane bagasse waste to produce valuable chemicals and value-added commodities.


Assuntos
Lovastatina , Saccharum , Humanos , Lovastatina/análise , Celulose/análise , Cromatografia Líquida , Espectrometria de Massas em Tandem , Fermentação , Fibras na Dieta/análise
3.
BMC Biotechnol ; 21(1): 28, 2021 03 27.
Artigo em Inglês | MEDLINE | ID: mdl-33773573

RESUMO

BACKGROUND: Microbial polysaccharides have been reported to possess remarkable bioactivities. Physarum polycephalum is a species of slime mold for which the microplasmodia are capable of rapid growth and can produce a significant amount of cell wall-less biomass. There has been a limited understanding of the polysaccharides produced by microplasmodia of slime molds, including P. polycephalum. Thus, the primary objectives of this research were first to chemically characterize the exopolysaccharides (EPS) and intracellular polysaccharides (IPS) of P. polycephalum microplasmodia and then to evaluate their cytotoxicity against several cancer cell lines. RESULTS: The yields of the crude EPS (4.43 ± 0.44 g/l) and partially purified (deproteinated) EPS (2.95 ± 0.85 g/l) were comparable (p > 0.05) with the respective crude IPS (3.46 ± 0.36 g/l) and partially purified IPS (2.45 ± 0.36 g/l). The average molecular weight of the EPS and IPS were 14,762 kDa and 1788 kDa. The major monomer of the EPS was galactose (80.22%), while that of the IPS was glucose (84.46%). Both crude and purified IPS samples showed significantly higher cytotoxicity toward Hela cells, especially the purified sample and none of the IPSs inhibited normal cells. Only 38.42 ± 2.84% Hela cells remained viable when treated with the partially purified IPS (1 mg/ml). However, although only 34.76 ± 6.58% MCF-7 cells were viable when exposed to the crude IPS, but the partially purified IPS displayed non-toxicity to MCF-7 cells. This suggested that the cytotoxicity toward MCF-7 would come from some component associated with the crude IPS sample (e.g. proteins, peptides or ion metals) and the purification process would have either completely removed or reduced amount of that component. Cell cycle analysis by flow cytometry suggested that the mechanism of the toxicity of the crude IPS toward MCF-7 and the partially purified IPS toward Hela cells was due to apoptosis. CONCLUSIONS: The EPS and IPS of P. polycephalum microplasmodia had different chemical properties including carbohydrate, protein and total sulfate group contents, monosaccharide composition and molecular weights, which led to different cytotoxicity activities. The crude and partially purified IPSs would be potential materials for further study relating to cancer treatment.


Assuntos
Physarum polycephalum/química , Polissacarídeos/química , Polissacarídeos/farmacologia , Antineoplásicos/química , Antineoplásicos/metabolismo , Antineoplásicos/farmacocinética , Células HeLa , Humanos , Células MCF-7 , Peso Molecular , Physarum polycephalum/metabolismo , Polissacarídeos/metabolismo
4.
Bioprocess Biosyst Eng ; 44(6): 1063-1070, 2021 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-33495932

RESUMO

Endophytic fungi isolated from desert plants are among the less known organisms with potentially valuable applications. The bioactivities of an endophytic fungus isolated from Aloe vera, a plant found in central regions of Asir desert, Saudi Arabia. Based on primary phytochemical screening, an efficient isolate was selected and identified according to the sequence analysis of the internal spacer regions ITS1, ITS4 and the 5.8S region as Preussia africana belonging to the family Sporormiaceae. The crude extract of this fungus was evaluated for its bioactivities. Under static conditions, the crude extract at a concentration of 500 µg/mL had a strong 2,2-diphenyl-1-picrylhydrazyl (DPPH) scavenging rate of 87%, whereas a higher concentration (100 µg/mL) had an astounding wound healing effect (42.6% at 48 h) when compared to positive control. Moreover, the crude extract with a concentration of 50 µg/mL was active against almost all cancer cell lines such as HeLa (cervical cancer), Hep G2 (liver cancer), MCF-7 (breast cancer), A549 (lung cancer), LN-229 (glioblastoma), A-431 (skin cancer), and kidney cell line (HEK 293T). The results suggest that the endophytic fungus P. africana from A. vera has wide therapeutic applications against severe disease conditions.


Assuntos
Aloe/microbiologia , Ascomicetos , Endófitos , Ascomicetos/classificação , Ascomicetos/genética , Ascomicetos/isolamento & purificação , Ascomicetos/metabolismo , Endófitos/classificação , Endófitos/genética , Endófitos/isolamento & purificação , Endófitos/metabolismo , Arábia Saudita
5.
BMC Evol Biol ; 19(1): 78, 2019 03 14.
Artigo em Inglês | MEDLINE | ID: mdl-30871462

RESUMO

BACKGROUND: Dictyostelid cellular slime molds (dictyostelids) are microscopic throughout their entire life cycle. The vegetative phase consists of single-celled amoeboid forms which live in the soil/leaf litter microhabitat of fields and forests along with animal dung, where they feed upon bacteria and other microbes, grow, and multiply until the available food supply is exhausted. When this happens, the amoeboid forms aggregate together in large numbers to form multi-celled pseudoplasmodia, which then give rise to fruiting bodies (sorocarps) that consist of supportive stalks and unwalled sori containing propagative spores. RESULTS: Dictyostelium purpureum var. pseudosessile, a new variant of dictyostelid, is described herein, based on morphological features and molecular data. This new variant was isolated from soil samples collected in two tropical areas of China. The complete spore-to-spore life cycle of this species, which required 50 h, including spore germination, myxamoebae, cell aggregation, pseudoplasmodium, and sorocarp formation, was documented. Descriptions and illustrations are provided for this species based on our collections. Data from ontogeny, morphology and phylogeny analyses (SSU) of D. purpureum var. pseudosessile confirm that it is a Group 4 species according to the newly proposed classification of dictyostelids. CONCLUSIONS: Our results suggest that the violet sori, widens at the midpoint of sorophore and simple recurved sorophore bases represent the prominent features for the new variant D. purpureum var. pseudosessile. The latter is a Group 4 species now known from two tropical areas of China where dictyostelids remains understudied.


Assuntos
Dictyostelium/classificação , Clima Tropical , Animais , China , Dictyostelium/genética , Dictyostelium/crescimento & desenvolvimento , Estágios do Ciclo de Vida , Filogenia , RNA Ribossômico/genética , Subunidades Ribossômicas Menores/genética
6.
J Eukaryot Microbiol ; 66(5): 757-770, 2019 09.
Artigo em Inglês | MEDLINE | ID: mdl-30793409

RESUMO

Myxomycetes (plasmodial slime molds) are abundant protist predators that feed on bacteria and other microorganisms, thereby playing important roles in terrestrial nutrient cycling. Despite their significance, little is known about myxomycete communities and the extent to which they are affected by nutrient availability. We studied the influence of long-term addition of N, P, and K on the myxomycete community in a lowland forest in the Republic of Panama. In a previous study, microbial biomass increased with P but not N or K addition at this site. We hypothesized that myxomycetes would increase in abundance in response to P but that they would not respond to the sole addition of N or K. Moist chamber cultures of leaf litter and small woody debris were used to quantify myxomycete abundance. We generated the largest myxomycete dataset (3,381 records) for any single locality in the tropics comprised by 91 morphospecies. In line with our hypothesis, myxomycete abundance increased in response to P addition but did not respond to N or K. Community composition was unaffected by nutrient treatments. This work represents one of very few large-scale and long-term field studies to include a heterotrophic protist highlighting the feasibility and value in doing so.


Assuntos
Mixomicetos/metabolismo , Ecossistema , Florestas , Mixomicetos/crescimento & desenvolvimento , Nitrogênio/metabolismo , Nutrientes/metabolismo , Panamá , Fósforo/metabolismo , Folhas de Planta/parasitologia , Potássio/metabolismo , Solo/parasitologia , Madeira/parasitologia
7.
BMC Evol Biol ; 18(1): 198, 2018 12 22.
Artigo em Inglês | MEDLINE | ID: mdl-30577752

RESUMO

BACKGROUND: Dictyostelid cellular slime molds (dictyostelids) are common inhabitants of the soil and leaf litter layer of fields and forests, along with animal dung, where they feed mostly on bacteria. However, reports on the species diversity of dictyostelids in South Asia, particularly Thailand, are limited. The research reported in this paper was carried out to increase our knowledge of the species diversity of this group of organisms in northern Thailand. RESULTS: Forty soil samples were collected at four localities in northern Thailand to assess the species richness of dictyostelids. These samples yielded five dictyostelid isolates that were not morphologically consistent with any described species. Based on molecular signatures, all five of these isolates were assigned to the family Cavenderiaceae, genus Cavenderia. All five share a number of morphological similarities with other known species from this family. The new taxa differ from previously described species primarily in the size and complexity of their fruiting bodies (sorocarps). This paper describes these new species (Cavenderia aureostabilis, C. bhumiboliana, C. protodigitata, C. pseudoaureostipes, and C. subdiscoidea) based on a combination of morphological characteristics and their phylogenetic positions. CONCLUSIONS: At least 15 taxa of dictyostelids were obtained from the four localities in northern Thailand, which indicates the high level of species diversity in this region. Five species were found to be new to science. These belong to the family Cavenderiaceae, genus Cavenderia, and were described based on both morphology and phylogeny.


Assuntos
Amoeba/classificação , Dictyosteliida/classificação , Animais , Filogenia , Especificidade da Espécie , Tailândia
8.
BMC Biotechnol ; 17(1): 76, 2017 Nov 09.
Artigo em Inglês | MEDLINE | ID: mdl-29121887

RESUMO

BACKGROUND: The myxomycetes derive their common name (slime molds) from the multinucleate trophic stage (plasmodium) in the life cycle, which typically produces a noticeable amount of slimy materials, some of which is normally left behind as a "slime track" as the plasmodium migrates over the surface of a particular substrate. The study reported herein apparently represents the first attempt to investigate the chemical composition and biological activities of slime tracks and the exopolysaccharides (EPS) which cover the surface of the plasmodia of Physarum polycephalum and Physarella oblonga. RESULTS: Chemical analyses indicated that the slime tracks and samples of the EPS consist largely of carbohydrates, proteins and various sulphate groups. Galactose, glucose and rhamnose are the monomers of the cabohydrates present. The slime tracks of both species and the EPS of Phy. oblonga contained rhamnose, but the EPS of Ph. polycephalum had glucose as the major monomer. In term of biological activities, the slime tracks displayed no antimicrobial activity, low anticancer activity and only moderate antioxidant activity. However, EPSs from both species showed remarkable antimicrobial activities, especially toward Candida albicans (zone of inhibition ≥20 mm). Minimum inhibitory concentrations of this fungus were found to be 2560 µg/mL and 1280 µg/mL for EPS from Phy. oblonga and Ph. polycephalum, respectively. These EPS samples also showed moderate antioxidant activities. However, they both displayed cytotoxicity towards MCF-7 and HepG2 cancer cells. Notably, EPS isolated from the plasmodium of Phy. oblonga inhibited the cell growth of MCF-7 and HepG2 at the half inhibitory concentration (IC50) of 1.22 and 1.11 mg/mL, respectively. CONCLUSIONS: EPS from Ph. polycephalum plasmodium could be a potential source of antifungal compounds, and EPS from Phy. oblonga could be a potential source of anticancer compounds.


Assuntos
Antioxidantes/química , Produtos Biológicos/química , Micetozoários/química , Physarum polycephalum/química , Polissacarídeos/química , Antioxidantes/farmacologia , Antioxidantes/toxicidade , Produtos Biológicos/farmacologia , Produtos Biológicos/toxicidade , Candida albicans/efeitos dos fármacos , Proliferação de Células/efeitos dos fármacos , Células Hep G2 , Humanos , Células MCF-7 , Testes de Sensibilidade Microbiana , Micetozoários/fisiologia , Physarum polycephalum/fisiologia , Polissacarídeos/farmacologia , Polissacarídeos/toxicidade , Staphylococcus aureus/efeitos dos fármacos
9.
Mycologia ; 108(1): 80-109, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-26490703

RESUMO

Two series of samples collected for isolation of dictyostelid cellular slime molds (dictyostelids) in Madagascar yielded a relatively large number of isolates of Polysphondylium. Most of these turned out to be species new to science that show varying degrees of clustering from unclustered to coremiform as well as an ability to migrate. Migratory ability (phototaxis) is a common feature of species assigned to Group 2 of the Polysphondylia and is common in the new species from Madagascar. Another common feature, clustering, appears to be a strategy for keeping fruiting bodies erect for a longer time in a climate that is relatively dry, whereas migratory ability may function seasonally when there is more rainfall. Thirteen species are described herein. Each of these is characterized by a particular set of distinguishing features, and collectively they expand our concept of the genus Polysphondylium.


Assuntos
Dictyosteliida/classificação , Sequência de Bases , DNA de Protozoário/química , DNA de Protozoário/genética , Dictyosteliida/citologia , Dictyosteliida/genética , Geografia , Madagáscar , Dados de Sequência Molecular , Filogenia , Esporos de Protozoários
10.
Mycologia ; 107(1): 137-41, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25232069

RESUMO

A new species of Perichaena, described herein as P. echinolophospora, was isolated in moist chamber cultures from substrate samples collected in the monsoon deciduous lowland tropical forests (Cat Tien National Park, Vinh Cuu Nature Reserve) and mixed montane tropical forests (Bi Dup-Nui Ba Nature Reserve) of southern Vietnam. Perichaena echinolophospora was recovered from ground litter, aerial litter and the bark of living trees. The morphology of representative specimens was examined by light and scanning electron microscopy, and micrographs of relevant details are provided. Spore ornamentation consists of a regular reticulum with large meshes, 3-4 µm in wide and limited by denticulate ridges, 1.7-2.2 µm tall, and clusters of small warts and rods densely distributed over the spore surface within the meshes of the reticulum and visible only by SEM. The stability of the taxonomic characters of the species was confirmed by several collections obtained during three field seasons.


Assuntos
Agaricales/crescimento & desenvolvimento , Agaricales/isolamento & purificação , Microbiologia do Solo , Agaricales/classificação , Agaricales/genética , Dados de Sequência Molecular , Esporos Fúngicos/classificação , Esporos Fúngicos/genética , Esporos Fúngicos/crescimento & desenvolvimento , Esporos Fúngicos/isolamento & purificação , Vietnã
11.
Mycologia ; 107(5): 959-85, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26240306

RESUMO

Based on a combination of morphological and molecular investigations, a critical revision of the widely distributed myxomycete Tubifera ferruginosa is presented. A phylogeny of the morphospecies, based on partial 18S nuc rDNA sequences, displays several clearly distinct clades, all differing by a genetic distance (p distance) of at least 0.15, with the distance within the clades below 0.11. These molecular differences correlate with morphological characters, such as the shape of sporothecal tips, the color of immature fructifications and the ultrastructure of the inner surface of the peridium. The combination of morphological and molecular data provides evidence that T. ferruginosa is actually a species complex, representing at least seven species. These are T. ferruginosa sensu stricto, T. applanata, T. corymbosa, T. dudkae, T. magna, T. montana and T. pseudomicrosperma. Among these T. applanata and T. dudkae (as Reticularia dudkae) were described recently based on morphological characters and the 18S nuc rDNA phylogeny confirmed their separation. Another four species, T. corymbosa, T. magna, T. montana and T. pseudomicrosperma, are described here. We propose an epitype for T. ferruginosa sensu stricto and recognize subsp. ferruginosa and subsp. acutissima within this species. All studied taxa of the T. ferruginosa complex are shown to lack a capillitium. Structures formerly described as capillitium represent the hyphae of fungi occurring within the fructifications.


Assuntos
Variação Genética , Mixomicetos/genética , DNA Fúngico/genética , Mixomicetos/ultraestrutura , Filogenia , Especificidade da Espécie
12.
Mycologia ; 107(5): 1012-22, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26240305

RESUMO

A new species of myxomycete, Perichaena longipes, is described from 56 sporocarp specimens that appeared in moist chamber cultures prepared with samples of decaying plant materials collected in Panama, Costa Rica and Brazil. This new species is distinguished from the morphologically similar species P. pedata on the basis of the much longer stipe, lighter peridium and the unique ornamentation of the capillitium. The nuc 18S ribosomal DNA sequences obtained from four specimens of P. longipes support the distinction of this new taxon and its separation from P. pedata. Furthermore, maximum likelihood phylogeny supports earlier evidence that species currently within the genus Perichaena do not form a monophyletic clade. Instead they appear to form three separate branches within the bright-spored clade. The first clade includes P. longipes together with several species of Trichia and Metatrichia, the second includes P. pedata and P. chrysosperma, and the third clade is composed of P. corticalis, P. depressa and P. luteola.


Assuntos
DNA Fúngico/genética , Mixomicetos/classificação , Mixomicetos/genética , Microscopia Eletrônica de Varredura , Mixomicetos/ultraestrutura , Panamá , RNA Fúngico/genética , RNA Ribossômico 18S/genética , Especificidade da Espécie
13.
Mycologia ; 106(6): 1212-9, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25028491

RESUMO

Based on a morphological investigation of a series of specimens collected in New South Wales and Tasmania and a phylogeny constructed with partial 18S ribosomal RNA gene sequences, we describe a new species Alwisia lloydiae; the fourth species within the recently revalidated genus Alwisia. This new species is characterized by short ovate sporothecae with mostly free stalks, morphologically resembling the recently described A. morula. However, the new species possesses a tubular capillitium that suggests an affinity with A. bombarda. The capillitium of the new species is ornamented with globular warts, and this feature separates it from all other members of the genus.


Assuntos
Mixomicetos/classificação , Sequência de Bases , DNA de Protozoário/química , DNA de Protozoário/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Microscopia Eletrônica de Varredura , Dados de Sequência Molecular , Mixomicetos/genética , Mixomicetos/isolamento & purificação , New South Wales , Filogenia , RNA Ribossômico 18S/genética , Análise de Sequência de DNA , Esporos de Protozoários , Tasmânia
14.
Mycologia ; 106(5): 936-48, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24987129

RESUMO

Based on morphological investigations and a phylogeny constructed with partial sequences of the SSU rDNA gene, we revalidate the genus Alwisia and propose the combination Alwisia bombarda Berk. & Broome to be used against Tubifera bombarda (Berk. & Broome) G.W. Martin. Two new species, Alwisia morula and A. repens, are described based on material collected respectively in Costa Rica and Australia. Both new species lack a capillitium and possess individually stalked subspherical sporothecae. Alwisia repens differs from A. morula by its procumbent stalks and iridescent peridium. A comparison of 83 sequences of species in the genera Lycogala, Reticularia and Tubifera with a recent two-gene phylogeny of the bright-spored myxomycetes resulted in a similar topology of both Bayesian and maximum likelihood trees and placed A. bombarda, A. morula and A. repens in one well delimited clade within Reticulariaceae.


Assuntos
Mixomicetos/classificação , Austrália , Sequência de Bases , Teorema de Bayes , Costa Rica , DNA Ribossômico/química , DNA Ribossômico/genética , Carpóforos , Microscopia Eletrônica de Varredura , Técnicas de Tipagem Micológica , Mixomicetos/genética , Mixomicetos/isolamento & purificação , Mixomicetos/ultraestrutura , Filogenia , RNA Ribossômico 18S/genética , Análise de Sequência de DNA
15.
Front Plant Sci ; 15: 1411231, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38916031

RESUMO

Myxomycetes (plasmodial slime molds) are eukaryotic protist predators that are associated with wood, leaf litter, and soil in forests, where they feed on bacteria, protozoans, and (to a more limited extent) fungi. The health of crop plants is essential because they represent a primary food source for humans. However, when myxomycetes produce numerous fruiting bodies on the stems and leaves of crop plants, which is herein referred to as a myxomycete colonization, this has the potential of interfering with plant photosynthesis, transpiration and respiration by blocking out light and covering stomata. Myxomycetes are not pathogens, but their occurrence on plants can be mistakenly interpreted as some type of infection. However, this phenomenon has been largely ignored. This paper provides a comprehensive overview of the taxonomic and economic diversity of the organisms involved in myxomycete colonization. In addition, the various types of myxomycete colonization reported in the literature are described and discussed, a number of images provided, and cultural and chemical prevention and control measures are summarized. The latter should be of significant relevance for local production of crops and plant protective stations. While myxomycetes are not pathogens of crop plants, some species can seriously impact commercially grown mushrooms. Reports of myxomycetes affecting mushrooms are also described in this paper.

16.
Microorganisms ; 12(6)2024 May 24.
Artigo em Inglês | MEDLINE | ID: mdl-38930443

RESUMO

Protected areas are widely considered an essential strategy for biodiversity conservation. Dictyostelids are unique protists known to have important ecological functions in promoting soil and plant health through their top-down regulation of ecosystem processes, such as decomposition, that involve bacterial populations. But the relationship between dictyostelid diversity within protected areas remains poorly understood, especially on a large scale. Herein, we report data on the distribution of dictyostelids, identified with ITS + SSU rRNA molecular and morphology-based taxonomy, from soil samples collected in the Fanjing Mountain protected area of Guizhou Province, Southwest China. We compared the biodiversity data of dictyostelids in Fanjing Mountain with similar data from previously sampled sites in four other protected areas, including Changbai Mountain (CB), Gushan Mountain (GS), Baiyun Mountain (BY), and Qinghai-Tibet Plateau (QT) in China. We identified four species of dictyostelids belonging to three genera (Dictyostelium, Heterostelium, and Polysphondylium) and herein provide information on the taxonomy of these species. Two species (Heterostelium pallidum and Dictyostelium purpureum) are common and widely distributed throughout the world, but one species (Polysphondylium fuscans) was new to China. Our data indicate that there is no distinguishable significant correlation between the dictyostelid species studied and environmental factors. Overall, the similarity index between Baiyun Mountain in Henan Province and Fanjing Mountain in Guizhou Province, located at approximately the same longitude, is the highest, and the Jaccard similarity coefficients (Jaccard index) of family, genus, and species are 100%, 100%, and 12.5%, respectively. From a species perspective, species in the same climate zone are not closely related, but obvious geographical distributions are evident in different climate zones. This preliminary study provided evidence of the ecological adaptation of dictyostelids to different biological niches.

17.
Sci Rep ; 14(1): 3183, 2024 02 07.
Artigo em Inglês | MEDLINE | ID: mdl-38326360

RESUMO

Secondary metabolites (SMs) are the primary source of therapeutics and lead chemicals in medicine. They have been especially important in the creation of effective cures for conditions such as cancer, malaria, bacterial and fungal infections, neurological and cardiovascular problems, and autoimmune illnesses. In the present study, Aspergillus pseudodeflectus AUMC 15761 was demonstrated to use wheat bran in solid state fermentation (SSF) at optimum conditions (pH 7.0 at 30 °C after 10 days of incubation and using sodium nitrate as a nitrogen source) to produce methyl ferulate and oleic acid with significant antioxidant and antibacterial properties. Gas chromatography-mass spectrometry (GC-MS) analysis of the crude methanol extract revealed eleven peaks that indicated the most common chemical components. Purification of methyl ferulate and oleic acid was carried out by column chromatography, and both compounds were identified by in-depth spectroscopic analysis, including 1D and 2D NMR and HR-ESI-MS. DPPH activity increased as the sample concentration increased. IC50 values of both compounds obtained were 73.213 ± 11.20 and 104.178 ± 9.53 µM, respectively. Also, the MIC value for methyl ferulate against Bacillus subtilis and Staphylococcus aureus was 0.31 mg/mL, while the corresponding MIC values for oleic acid were 1.25 mg/mL and 0.62 mg/mL for both bacterial strains, respectively. Molecular modeling calculations were carried out to reveal the binding mode of methyl ferulate and oleic acid within the binding site of the crucial proteins of Staphylococcus aureus. The docking results were found to be well correlated with the experimental data.


Assuntos
Antioxidantes , Aspergillus , Ácidos Cafeicos , Ácido Oleico , Antioxidantes/química , Ácido Oleico/farmacologia , Simulação de Acoplamento Molecular , Fibras na Dieta , Antibacterianos
18.
Mycologia ; 105(1): 52-60, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-22778170

RESUMO

The mantle of dead organic material ("canopy soil") associated with the mats of vascular and nonvascular epiphytes found on the branches of trees in the temperate rainforests along the southwestern coast of the South Island of New Zealand were examined for evidence of ectomycorrhizal fungi. DNA sequencing and cluster analysis were used to identify the taxa of fungi present in 74 root tips collected from the canopy soil microhabitat of three old growth Nothofagus menziesii trees in the South West New Zealand World Heritage Area. A diverse assemblage of ectomycorrhizal fungi was found to infect an extensive network of adventitious canopy roots of Nothofagus menziesii in this forest, including 14 phylotypes from nine genera of putative ectomycorrhizal fungi. Seven of the genera identified previously were known to form ectomycorrhizas with terrestrial roots of Nothofagus: Cortinarius, Russula, Cenococcum, Thelephora/Tomentella, Lactarius and Laccaria; two, Clavulina and Leotia, previously have not been reported forming ectomycorrhizas with Nothofagus. Canopy ectomycorrhizas provide an unexpected means for increased host nutrition that may have functional significance in some forest ecosystems. Presumably, canopy ectomycorrhizas on host adventitious roots circumvent the tree-ground-soil nutrient cycle by accessing a wider range of nutrients directly in the canopy than would be possible for non-mycorrhizal or arbuscular mycorrhizal canopy roots. In this system, both host and epiphytes would seem to be in competition for the same pool of nutrients in canopy soil.


Assuntos
Micorrizas/isolamento & purificação , Árvores/microbiologia , Biodiversidade , Ecossistema , Fungos , Dados de Sequência Molecular , Micorrizas/classificação , Micorrizas/genética , Nova Zelândia
19.
Mycologia ; 105(3): 610-35, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23396155

RESUMO

Ten small dictyostelids isolated from samples collected from the surface humus layer of seasonal rainforests of Belize and Guatemala were studied morphologically, and nine were found to represent distinct species, all with an average height of < 2 mm (0.5-3.5 mm). Although their fruiting bodies (sorocarps) closely resemble one another, the nine species differ in their patterns of aggregation, stream pattern, branching development, formation of microcysts, spore shape, presence or absence of spore granules and their distribution, as well as in the shapes and behavior of their sorogens and myxamoebae. These stable morphological features were sufficient to recognize nine new species of small dictyostelids, one with two varieties. SSU rDNA sequences were generated for all these new isolates, and phylogenetic analyses of these sequences show these new isolates belong to Dictyostelid group 3. As a result of this and other recent studies, the concept of what constitutes a species in the dictyostelids has become much more restricted and well defined, in as much as some of the morphological and behavioral patterns now being observed were overlooked in the past. The extent, flow direction and conformation of streaming within the group varies from simple aggregation mounds with no streams to short streams, to somewhat longer streams and finally to well developed streams. Each of these is characterized by a particular set of distinguishing features.


Assuntos
Dictyosteliida/classificação , Árvores/microbiologia , Belize , América Central , DNA Ribossômico/genética , Dictyosteliida/genética , Dictyosteliida/ultraestrutura , Ecossistema , Guatemala , Filogenia , Estações do Ano , Análise de Sequência de DNA/métodos , Solo , Microbiologia do Solo
20.
Microorganisms ; 11(9)2023 Sep 11.
Artigo em Inglês | MEDLINE | ID: mdl-37764126

RESUMO

Evidence from molecular studies indicates that myxomycetes (also called myxogastrids or plasmodial slime molds) have a long evolutionary history, and the oldest known fossil is from the mid-Cretaceous. However, they were not "discovered" until 1654, when a brief description and a woodcut depicting what is almost certainly the common species Lycogala epidendrum was published. First thought to be fungi, myxomycetes were not universally recognized as completely distinct until well into the twentieth century. Biodiversity surveys for the group being carried out over several years are relatively recent, with what is apparently the first example being carried out in the 1930s. Beginning in the 1980s, a series of such surveys yielded large bodies of data on the occurrence and distribution of myxomycetes in terrestrial ecosystems. The most notable of these were the All Taxa Biodiversity Inventory (ATBI) project carried out in the Great Smoky Mountains National Park, the Planetary Biodiversity Inventory Project (PBI) carried out in localities throughout the world, and the Myxotropic project being carried out throughout the Neotropics. The datasets available from both past and ongoing surveys now allow global and biogeographical patterns of myxomycetes to be assessed for the first time.

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