Detalhe da pesquisa
1.
Accurate and efficient protein sequence design through learning concise local environment of residues.
Bioinformatics
; 39(3)2023 03 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-36916746
2.
Seq-SetNet: directly exploiting multiple sequence alignment for protein secondary structure prediction.
Bioinformatics
; 38(4): 990-996, 2022 01 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-34849579
3.
ISSEC: inferring contacts among protein secondary structure elements using deep object detection.
BMC Bioinformatics
; 21(1): 503, 2020 Nov 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-33153432
4.
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling.
BMC Bioinformatics
; 20(Suppl 3): 135, 2019 Mar 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-30925867
5.
Correction to: Predicting protein inter-residue contacts using composite likelihood maximization and deep learning.
BMC Bioinformatics
; 20(1): 616, 2019 Nov 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-31783729
6.
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning.
BMC Bioinformatics
; 20(1): 537, 2019 Oct 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-31664895
7.
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts.
Bioinformatics
; 33(23): 3749-3757, 2017 Dec 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-28961795
8.
A metagenome-wide association study of gut microbiota in type 2 diabetes.
Nature
; 490(7418): 55-60, 2012 Oct 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-23023125
9.
Improving prediction of burial state of residues by exploiting correlation among residues.
BMC Bioinformatics
; 18(Suppl 3): 70, 2017 Mar 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-28361691
10.
FALCON@home: a high-throughput protein structure prediction server based on remote homologue recognition.
Bioinformatics
; 32(3): 462-4, 2016 Feb 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-26454278
11.
Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix.
Biochem Biophys Res Commun
; 472(1): 217-22, 2016 Mar 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-26920058
12.
Protein Structure Prediction: Challenges, Advances, and the Shift of Research Paradigms.
Genomics Proteomics Bioinformatics
; 21(5): 913-925, 2023 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-37001856
13.
ProALIGN: Directly Learning Alignments for Protein Structure Prediction via Exploiting Context-Specific Alignment Motifs.
J Comput Biol
; 29(2): 92-105, 2022 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-35073170
14.
Incorporating Ab Initio energy into threading approaches for protein structure prediction.
BMC Bioinformatics
; 12 Suppl 1: S54, 2011 Feb 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-21342587
15.
CopulaNet: Learning residue co-evolution directly from multiple sequence alignment for protein structure prediction.
Nat Commun
; 12(1): 2535, 2021 05 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-33953201
16.
Counting of oligomers in sequences generated by markov chains for DNA motif discovery.
J Bioinform Comput Biol
; 7(1): 39-54, 2009 Feb.
Artigo
em Inglês
| MEDLINE | ID: mdl-19226659
17.
CLEMAPS: multiple alignment of protein structures based on conformational letters.
Proteins
; 71(2): 728-36, 2008 May 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-17979193
18.
CLePAPS: fast pair alignment of protein structures based on conformational letters.
J Bioinform Comput Biol
; 6(2): 347-66, 2008 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-18464327
19.
TreeFam: a curated database of phylogenetic trees of animal gene families.
Nucleic Acids Res
; 34(Database issue): D572-80, 2006 Jan 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-16381935
20.
A cross-species alignment tool (CAT).
BMC Bioinformatics
; 8: 349, 2007 Sep 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-17880681