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1.
Proc Natl Acad Sci U S A ; 119(8)2022 02 22.
Artigo em Inglês | MEDLINE | ID: mdl-35165184

RESUMO

Multicomponent self-assembly mixtures offer the possibility of encoding multiple target structures with the same set of interacting components. Selective retrieval of one of the stored structures has been attempted by preparing an initial state that favors the assembly of the required target, through seeding, concentration patterning, or specific choices of interaction strengths. This may not be possible in an experiment where on-the-fly reconfiguration of the building blocks to switch functionality may be required. In this paper, we explore principles of inverse design of a multicomponent, self-assembly mixture capable of encoding two competing structures that can be selected through simple temperature protocols. We design the target structures to realize the generic situation in which one of the targets has the lower nucleation barrier, while the other is globally more stable. We observe that, to avoid the formation of spurious or chimeric aggregates, the number of neighboring component pairs that occur in both structures should be minimal. Our design also requires the inclusion of components that are part of only one of the target structures. We observe, however, that to maximize the selectivity of retrieval, the component library itself should be maximally shared by the two targets, within such a constraint. We demonstrate that temperature protocols can be designed that lead to the formation of either one of the target structures with high selectivity. We discuss the important role played by secondary aggregation products in improving selectivity, which we term "vestigial aggregates."

2.
Macromol Rapid Commun ; : e2400359, 2024 Jun 19.
Artigo em Inglês | MEDLINE | ID: mdl-38897179

RESUMO

Understanding the transport of nanoparticles from and within hydrogels is a key issue for the design of nanocomposite hydrogels for drug delivery systems and tissue engineering. To investigate the translocation of nanocarriers from and within hydrogel networks triggered by changes of temperature, ultrasmall (8 nm) and small (80 nm) silica nanocapsules are embedded in temperature-responsive hydrogels and non-responsive hydrogels. The ultrasmall silica nanocapsules are released from temperature-responsive hydrogels to water or transported to other hydrogels upon direct activation by heating or indirect activation by Joule heating; while, they are not released from non-responsive hydrogel. Programmable transport of nanocarriers from and in hydrogels provides insights for the development of complex biomedical devices and soft robotics.

3.
Proc Natl Acad Sci U S A ; 115(29): 7509-7514, 2018 07 17.
Artigo em Inglês | MEDLINE | ID: mdl-29967159

RESUMO

We describe a minimal realization of reversibly programmable matter in the form of a featureless smooth elastic plate that has the capacity to store information in a Braille-like format as a sequence of stable discrete dimples. Simple experiments with cylindrical and spherical shells show that we can control the number, location, and the temporal order of these dimples, which can be written and erased at will. Theoretical analysis of the governing equations in a specialized setting and numerical simulations of the complete equations allow us to characterize the phase diagram for the formation of these localized elastic states, elastic bits (e-bits), consistent with our observations. Given that the inherent bistability and hysteresis in these low-dimensional systems arise exclusively due to the geometrical-scale separation, independent of material properties or absolute scale, our results might serve as alternate approaches to small-scale mechanical memories.

4.
Annu Rev Biomed Eng ; 21: 469-493, 2019 06 04.
Artigo em Inglês | MEDLINE | ID: mdl-31167101

RESUMO

In recent years, a diverse set of mechanisms have been developed that allow DNA strands with specific sequences to sense information in their environment and to control material assembly, disassembly, and reconfiguration. These sequences could serve as the inputs and outputs for DNA computing circuits, enabling DNA circuits to act as chemical information processors to program complex behavior in chemical and material systems. This review describes processes that can be sensed and controlled within such a paradigm. Specifically, there are interfaces that can release strands of DNA in response to chemical signals, wavelengths of light, pH, or electrical signals, as well as DNA strands that can direct the self-assembly and dynamic reconfiguration of DNA nanostructures, regulate particle assemblies, control encapsulation, and manipulate materials including DNA crystals, hydrogels, and vesicles. These interfaces have the potential to enable chemical circuits to exert algorithmic control over responsive materials, which may ultimately lead to the development of materials that grow, heal, and interact dynamically with their environments.


Assuntos
Computadores Moleculares , DNA/química , Algoritmos , Aptâmeros de Nucleotídeos/química , Aptâmeros de Nucleotídeos/genética , Sequência de Bases , Engenharia Biomédica , Computadores Moleculares/estatística & dados numéricos , DNA/genética , DNA/ultraestrutura , Sistemas de Liberação de Medicamentos , Eletroquímica , Hidrogéis , Concentração de Íons de Hidrogênio , Nanocápsulas/química , Nanoestruturas/química , Nanoestruturas/ultraestrutura , Nanotecnologia
5.
Proc Natl Acad Sci U S A ; 113(41): E6007-E6015, 2016 10 11.
Artigo em Inglês | MEDLINE | ID: mdl-27671658

RESUMO

Shape-programmable matter is a class of active materials whose geometry can be controlled to potentially achieve mechanical functionalities beyond those of traditional machines. Among these materials, magnetically actuated matter is particularly promising for achieving complex time-varying shapes at small scale (overall dimensions smaller than 1 cm). However, previous work can only program these materials for limited applications, as they rely solely on human intuition to approximate the required magnetization profile and actuating magnetic fields for their materials. Here, we propose a universal programming methodology that can automatically generate the required magnetization profile and actuating fields for soft matter to achieve new time-varying shapes. The universality of the proposed method can therefore inspire a vast number of miniature soft devices that are critical in robotics, smart engineering surfaces and materials, and biomedical devices. Our proposed method includes theoretical formulations, computational strategies, and fabrication procedures for programming magnetic soft matter. The presented theory and computational method are universal for programming 2D or 3D time-varying shapes, whereas the fabrication technique is generic only for creating planar beams. Based on the proposed programming method, we created a jellyfish-like robot, a spermatozoid-like undulating swimmer, and an artificial cilium that could mimic the complex beating patterns of its biological counterpart.

6.
Proc Natl Acad Sci U S A ; 112(36): 11175-80, 2015 Sep 08.
Artigo em Inglês | MEDLINE | ID: mdl-26294253

RESUMO

Curvature and mechanics are intimately connected for thin materials, and this coupling between geometry and physical properties is readily seen in folded structures from intestinal villi and pollen grains to wrinkled membranes and programmable metamaterials. While the well-known rules and mechanisms behind folding a flat surface have been used to create deployable structures and shape transformable materials, folding of curved shells is still not fundamentally understood. Shells naturally deform by simultaneously bending and stretching, and while this coupling gives them great stability for engineering applications, it makes folding a surface of arbitrary curvature a nontrivial task. Here we discuss the geometry of folding a creased shell, and demonstrate theoretically the conditions under which it may fold smoothly. When these conditions are violated we show, using experiments and simulations, that shells undergo rapid snapping motion to fold from one stable configuration to another. Although material asymmetry is a proven mechanism for creating this bifurcation of stability, for the case of a creased shell, the inherent geometry itself serves as a barrier to folding. We discuss here how two fundamental geometric concepts, creases and curvature, combine to allow rapid transitions from one stable state to another. Independent of material system and length scale, the design rule that we introduce here explains how to generate snapping transitions in arbitrary surfaces, thus facilitating the creation of programmable multistable materials with fast actuation capabilities.

7.
Soft Robot ; 2024 Apr 10.
Artigo em Inglês | MEDLINE | ID: mdl-38598718

RESUMO

Constant development of soft robots, stretchable electronics, or flexible medical devices forces the research to look for new flexible structures that can change their shapes under external physical stimuli. This study presents a soft robotic structure that can change its shape into different three-dimensional (3D) configurations in response to electric current flown through the embedded liquid-metal conductors enabling electromagnetic actuation. The proposed structure is composed of volumetric pixels (voxels) connected in series where each can be independently controlled by the inputs of electrical current and vacuum pressure. A single voxel is made up of a granular core (GC) with an outer shell made of silicone rubber. The shell has embedded channels filled with liquid metal. The structure changes its shape under the Lorentz force produced by the liquid metal channel under applied electrical current. The GC allows the structure to maintain its shape after deformation even when the current is shut off. This is possible due to the granular jamming effect. In this study, we show the concept, the results of multiphysics simulation, and experimental characterization, including among other techniques, such as 3D digital image correlation or 3D magnetic field scanning, to study the different properties of the structure. We prove that the proposed structure can morph into many different shapes with the amplitude higher than 10 mm, and this process can be both fully reversible and repeatable.

8.
Adv Mater ; 35(26): e2300535, 2023 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-36977466

RESUMO

Programming inflatable systems to deform to desired 3D shapes opens up multifarious applications in robotics, morphing architecture, and interventional medicine. This work elicits complex deformations by attaching discrete strain limiters to cylindrical hyperelastic inflatables. Using this system, a method is presented to solve the inverse problem of programming myriad 3D centerline curves upon inflation. The method entails two steps: first, a reduced-order model generates a conceptual solution giving coarse indications of strain limiter placement on the undeformed cylindrical inflatable. This low-fidelity solution then seeds a finite element simulation nested within an optimization loop to further tune strain limiter parameters. We leverage this framework to achieve functionality through a priori programmed deformations of cylindrical inflatables, including 3D curve matching, self-tying knotting, and manipulation. The results hold broad significance for the emerging computational design of inflatable systems.

9.
Front Bioeng Biotechnol ; 11: 1125156, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37064226

RESUMO

Cell-free protein expression systems are here combined with 3D-printed structures to study the challenges and opportunities as biofabrication enters the spaces of architecture and design. Harnessing large-scale additive manufacturing of biological materials, we examined the addition of cell-free protein expression systems ("TXTL" i.e., biological transcription-translation machinery without the use of living cells) to printed structures. This allowed us to consider programmable, living-like, responsive systems for product design and indoor architectural applications. This emergent, pluripotent technology offers exciting potential in support of health, resource optimization, and reduction of energy use in the built environment, setting a new path to interactivity with mechanical, optical, and (bio) chemical properties throughout structures. We propose a roadmap towards creating healthier, functional and more durable systems by deploying a multiscale platform containing biologically-active components encapsulated within biopolymer lattices operating at three design scales: (i) supporting cell-free protein expression in a biopolymer matrix (microscale), (ii) varying material properties of porosity and strength within two-dimensional lattices to support biological and structural functions (mesoscale), and (iii) obtaining folded indoor surfaces that are structurally sound at the meter scale and biologically active (we label that regime macroscale). We embedded commercially available cell-free protein expression systems within silk fibroin and sodium alginate biopolymer matrices and used green fluorescent protein as the reporter to confirm their compatibility. We demonstrate mechanical attachment of freeze-dried bioactive pellets into printed foldable fibrous biopolymer lattices showing the first steps towards modular multiscale fabrication of large structures with biologically active zones. Our results discuss challenges to experimental setup affecting expression levels and show the potential of robust cell-free protein-expressing biosites within custom-printed structures at scales relevant to everyday consumer products and human habitats.

10.
J Comput Biol ; 29(4): 317-343, 2022 04.
Artigo em Inglês | MEDLINE | ID: mdl-35255223

RESUMO

We consider an extension to the geometric amoebot model that allows amoebots to form so-called circuits. Given a connected amoebot structure, a circuit is a subgraph formed by the amoebots that permits the instant transmission of signals. We show that such an extension allows for significantly faster solutions to a variety of problems related to programmable matter. More specifically, we provide algorithms for leader election, consensus, compass alignment, chirality agreement, and shape recognition. Leader election can be solved in Θ(logn) rounds, with high probability (w.h.p.), consensus in O(1) rounds, and both, compass alignment and chirality agreement, can be solved in O(logn) rounds, w.h.p. For shape recognition, the amoebots have to decide whether the amoebot structure forms a particular shape. We show that the amoebots can detect a shape composed of triangles within O(1) rounds. Finally, we show how the amoebots can detect a parallelogram with linear and polynomial side ratio within Θ(logn) rounds, w.h.p.


Assuntos
Algoritmos
11.
Adv Mater ; 33(19): e2006939, 2021 May.
Artigo em Inglês | MEDLINE | ID: mdl-33792085

RESUMO

The rapidly expanding field of soft robotics has provided multiple examples of how entirely soft machines and actuators can outperform conventional rigid robots in terms of adaptability, maneuverability, and safety. Unfortunately, the soft and flexible materials used in their construction impose intrinsic limitations on soft robots, such as low actuation speeds and low output forces. Nature offers multiple examples where highly flexible organisms exploit mechanical instabilities to store and rapidly release energy. Guided by these examples, researchers have recently developed a variety of strategies to overcome speed and power limitations in soft robotics using mechanical instabilities. These mechanical instabilities provide, through rapid transitions from structurally stable states, a new route to achieve high output power amplification and attain impressive actuation speeds. Here, an overview of the literature related to the development of soft robots and actuators that exploit mechanical instabilities to expand their actuation speed, output power, and functionality is presented. Additionally, strategies using structural phase transitions to address current challenges in the area of soft robotic control, sensing, and actuation are discussed. Approaches using instabilities to create entirely soft logic modules to imbue soft robots with material intelligence and distributed computational capabilities are also reviewed.

12.
ACS Synth Biol ; 9(4): 749-755, 2020 04 17.
Artigo em Inglês | MEDLINE | ID: mdl-32212717

RESUMO

This study presents a mechanism for releasing a series of different short DNA sequences from sequestered complexes, one after another, using coupled biochemical reactions. The process uses stages of coupled DNA strand-displacement reactions that first release an output molecule and then trigger the initiation of the next release stage. We demonstrate the sequential release of 25 nM of four different sequences of DNA over a day, both with and without a centralized "clock" mechanism to regulate release timing. We then demonstrate how the presence of a target input molecule can determine which of several different release pathways are activated, analogous to branching conditional statements in computer programming. This sequential release circuit offers a means to schedule downstream chemical events, such as steps in the assembly of a nanostructure, or stages in a material's response to a stimulus.


Assuntos
Computadores Moleculares , DNA/química , Nanoestruturas/química , Nanotecnologia/métodos
13.
Adv Mater ; 27(1): 79-85, 2015 Jan 07.
Artigo em Inglês | MEDLINE | ID: mdl-25362863

RESUMO

Self-folding microscale origami patterns are demonstrated in polymer films with control over mountain/valley assignments and fold angles using trilayers of photo-crosslinkable copolymers with a temperature-sensitive hydrogel as the middle layer. The characteristic size scale of the folds W = 30 µm and figure of merit A/ W (2) ≈ 5000, demonstrated here represent substantial advances in the fabrication of self-folding origami.

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