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1.
Immunity ; 43(4): 624-6, 2015 Oct 20.
Artigo em Inglês | MEDLINE | ID: mdl-26488811

RESUMO

Long studied as modulators of insulin sensitivity, adipose tissue immune cells have recently been implicated in regulating fat mass and weight gain. In this issue of Immunity, Reisner and colleagues (2015) report that ablation of perforin-expressing dendritic cells induces T cell expansion, worsening autoimmunity and surprisingly increasing adiposity.


Assuntos
Autoimunidade/imunologia , Linfócitos T CD8-Positivos/imunologia , Células Dendríticas/imunologia , Inflamação/imunologia , Síndrome Metabólica/imunologia , Proteínas Citotóxicas Formadoras de Poros/análise , Animais , Feminino , Masculino
2.
Immunity ; 43(4): 776-87, 2015 Oct 20.
Artigo em Inglês | MEDLINE | ID: mdl-26384546

RESUMO

Emerging evidence suggests that immunological mechanisms underlie metabolic control of adipose tissue. Here, we have shown the regulatory impact of a rare subpopulation of dendritic cells, rich in perforin-containing granules (perf-DCs). Using bone marrow transplantation to generate animals selectively lacking perf-DCs, we found that these chimeras progressively gained weight and exhibited features of metabolic syndrome. This phenotype was associated with an altered repertoire of T cells residing in adipose tissue and could be completely prevented by T cell depletion in vivo. A similar impact of perf-DCs on inflammatory T cells was also found in a well-defined model of multiple sclerosis, experimental autoimmune encephlalomyelitis (EAE). Thus, perf-DCs probably represent a regulatory cell subpopulation critical for protection from metabolic syndrome and autoimmunity.


Assuntos
Autoimunidade/imunologia , Linfócitos T CD8-Positivos/imunologia , Células Dendríticas/imunologia , Inflamação/imunologia , Síndrome Metabólica/imunologia , Proteínas Citotóxicas Formadoras de Poros/análise , Tecido Adiposo/imunologia , Tecido Adiposo/metabolismo , Tecido Adiposo/patologia , Transferência Adotiva , Animais , Antígenos de Diferenciação/análise , Antígeno CD11c/análise , Linfócitos T CD8-Positivos/patologia , Linfócitos T CD8-Positivos/transplante , Células Clonais/imunologia , Grânulos Citoplasmáticos/química , Células Dendríticas/classificação , Células Dendríticas/ultraestrutura , Dieta Hiperlipídica/efeitos adversos , Encefalomielite Autoimune Experimental/imunologia , Encefalomielite Autoimune Experimental/patologia , Feminino , Inflamação/patologia , Depleção Linfocítica , Masculino , Síndrome Metabólica/etiologia , Síndrome Metabólica/patologia , Camundongos , Camundongos Endogâmicos C57BL , Camundongos Transgênicos , Obesidade/imunologia , Obesidade/patologia , Fenótipo , Proteínas Citotóxicas Formadoras de Poros/deficiência , Proteínas Citotóxicas Formadoras de Poros/genética , Quimera por Radiação , Tolerância a Antígenos Próprios/imunologia
3.
Int J Mol Sci ; 22(8)2021 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-33921817

RESUMO

Antimicrobial and immunomodulatory peptides (AMPs) are considered as the key players in the maintenance of skin barrier functions. Here, we developed a novel approach for the examination of AMPs in the outermost layer of the epidermis, namely stratum corneum (SC). The SC sample collection by tape stripping was coupled with detection by highly specific and sensitive parallel reaction monitoring (PRM)-based mass spectrometry. We found that hexane-free processing of SC samples produced higher protein yield compared to hexane-based extraction. Of the 18 investigated peptides, 9 could be detected either in healthy or in inflamed skin specimens. Regarding the amount of S100A8, LCN2, LACRT and LYZ significant topographical differences were described among gland poor (GP), sebaceous gland rich (SGR) and apocrine gland rich (AGR) healthy skin regions. We applied a minimally invasive, reproducible approach for sampling, which can be assessed for research and diagnostic purposes and for monitoring the effectiveness of therapies in skin diseases.


Assuntos
Epiderme/metabolismo , Espectrometria de Massas/métodos , Proteínas Citotóxicas Formadoras de Poros/análise , Trifosfato de Adenosina/metabolismo , Humanos , Pele/metabolismo
4.
Int J Mol Sci ; 22(6)2021 Mar 11.
Artigo em Inglês | MEDLINE | ID: mdl-33799744

RESUMO

Lasioglossin III (LL-III) is a cationic antimicrobial peptide derived from the venom of the eusocial bee Lasioglossum laticeps. LL-III is extremely toxic to both Gram-positive and Gram-negative bacteria, and it exhibits antifungal as well as antitumor activity. Moreover, it shows low hemolytic activity, and it has almost no toxic effects on eukaryotic cells. However, the molecular basis of the LL-III mechanism of action is still unclear. In this study, we characterized by means of calorimetric (DSC) and spectroscopic (CD, fluorescence) techniques its interaction with liposomes composed of a mixture of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and 1-palmitoyl-2-oleoyl-sn-glycero-3-rac-phosphoglycerol (POPG) lipids as a model of the negatively charged membrane of pathogens. For comparison, the interaction of LL-III with the uncharged POPC liposomes was also studied. Our data showed that LL-III preferentially interacted with anionic lipids in the POPC/POPG liposomes and induces the formation of lipid domains. Furthermore, the leakage experiments showed that the peptide could permeabilize the membrane. Interestingly, our DSC results showed that the peptide-membrane interaction occurs in a non-disruptive manner, indicating an intracellular targeting mode of action for this peptide. Consistent with this hypothesis, our gel-retardation assay experiments showed that LL-III could interact with plasmid DNA, suggesting a possible intracellular target.


Assuntos
Peptídeos Catiônicos Antimicrobianos/farmacologia , Abelhas/metabolismo , Membrana Celular/efeitos dos fármacos , Bactérias Gram-Negativas/efeitos dos fármacos , Bactérias Gram-Positivas/efeitos dos fármacos , Proteínas Citotóxicas Formadoras de Poros/farmacologia , Animais , Peptídeos Catiônicos Antimicrobianos/análise , Calorimetria/métodos , Membrana Celular/química , Permeabilidade da Membrana Celular/efeitos dos fármacos , Bicamadas Lipídicas/química , Lipossomos/química , Fosfatidilcolinas/química , Fosfatidilgliceróis/química , Proteínas Citotóxicas Formadoras de Poros/análise , Espectrofotometria/métodos
5.
Macromol Rapid Commun ; 38(24)2017 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-29144014

RESUMO

Nanopore analysis, which is, currently, chiefly used for DNA sequencing, is also an appealing technique for characterizing abiotic polymers. As a first step toward this goal, nanopore detection of non-natural monodispersed poly(phosphodiester)s as candidate backbone structures is reported herein. Two model homopolymers containing phosphopropyl repeat units (i.e., 56 or 104 r.u.) and a short thymidine nucleotide sequence are analyzed in the present work. They are tested in two different biological nanopores, α-hemolysin from Staphylococcus aureus, and aerolysin from Aeromonas hydrophila. These recordings are performed in aqueous medium at different KCl concentrations and various driving voltages. The data show a complex interaction with evidence for voltage dependence and threading, and underline the influence of the molecular structure and orientation of the precision poly(phosphodiester)s on the observed residual current signal as well as on the translocation dynamics. In particular, they suggest a dominant entropic contribution due to the high flexibility of the phosphodiester homopolymer.


Assuntos
Aeromonas hydrophila/química , Toxinas Bacterianas/análise , Proteínas Hemolisinas/análise , Organofosfatos/química , Polímeros/química , Proteínas Citotóxicas Formadoras de Poros/análise , Staphylococcus aureus/química , Entropia , Nanoporos
6.
Microbiol Immunol ; 58(5): 267-85, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24641673

RESUMO

Gram-negative bacteria cause many types of infections in animals from fish and shrimps to humans. Bacteria use Type III secretion systems (TTSSs) to translocate their toxins directly into eukaryotic cells. The V-antigen is a multifunctional protein required for the TTSS in Yersinia and Pseudomonas aeruginosa. V-antigen vaccines and anti-V-antigen antisera confer protection against Yersinia or P. aeruginosa infections in animal models. The V-antigen forms a pentameric cap structure at the tip of the Type III secretory needle; this structure, which has evolved from the bacterial flagellar cap structure, is indispensable for toxin translocation. Various pathogenic gram-negative bacteria such as Photorhabdus luminescens, Vibrio spp., and Aeromonas spp. encode homologs of the V-antigen. Because the V-antigens of pathogenic gram-negative bacteria play a key role in toxin translocation, they are potential therapeutic targets for combatting bacterial virulence. In the USA and Europe, these vaccines and specific antibodies against V-antigens are in clinical trials investigating the treatment of Yersinia or P. aeruginosa infections. Pathogenic gram-negative bacteria are of great interest because of their ability to infect fish and shrimp farms, their potential for exploitation in biological terrorism attacks, and their ability to cause opportunistic infections in humans. Thus, elucidation of the roles of the V-antigen in the TTSS and mechanisms by which these functions can be blocked is critical to facilitating the development of improved anti-V-antigen strategies.


Assuntos
Antígenos de Bactérias/análise , Toxinas Bacterianas/análise , Bactérias Gram-Negativas/química , Proteínas Citotóxicas Formadoras de Poros/análise , Homologia de Sequência , Animais , Antígenos de Bactérias/genética , Antígenos de Bactérias/imunologia , Toxinas Bacterianas/genética , Toxinas Bacterianas/imunologia , Vacinas Bacterianas/genética , Vacinas Bacterianas/imunologia , Bactérias Gram-Negativas/genética , Bactérias Gram-Negativas/imunologia , Infecções por Bactérias Gram-Negativas/microbiologia , Infecções por Bactérias Gram-Negativas/prevenção & controle , Infecções por Bactérias Gram-Negativas/veterinária , Humanos , Proteínas Citotóxicas Formadoras de Poros/genética , Proteínas Citotóxicas Formadoras de Poros/imunologia
7.
Prikl Biokhim Mikrobiol ; 50(2): 211-8, 2014.
Artigo em Russo | MEDLINE | ID: mdl-25272741

RESUMO

An enzyme immunoassay-based test system for Y. pestis V antigen detection was developed. The specificity and sensitivity of this system met the requirements for medical immunobiological preparations for the identification of causative agents of highly fatal diseases. The sensitivity of the test system was assessed, and its high specificity was also demonstrated: the test system did not detect bacterial cells of closely related (four Y. pseudotuberculosis strains) and heterologous microorganism strains. The test system developed was able to detect the V antigen at concentrations as low as 2.0 ng/mL in cells of nine experimental Y. pestis cultures. The obtained preparation can be recommended for use in laboratory diagnostics of plaque.


Assuntos
Anticorpos Monoclonais/química , Antígenos de Bactérias/análise , Técnicas Imunoenzimáticas/normas , Proteínas Citotóxicas Formadoras de Poros/análise , Yersinia pestis/isolamento & purificação , Animais , Anticorpos Monoclonais/imunologia , Anticorpos Monoclonais/isolamento & purificação , Especificidade de Anticorpos , Antígenos de Bactérias/imunologia , Humanos , Hibridomas/imunologia , Immunoblotting , Limite de Detecção , Camundongos , Camundongos Endogâmicos BALB C , Peste/diagnóstico , Peste/microbiologia , Proteínas Citotóxicas Formadoras de Poros/imunologia , Yersinia pestis/química , Yersinia pestis/imunologia , Yersinia pseudotuberculosis/química , Yersinia pseudotuberculosis/imunologia , Yersinia pseudotuberculosis/isolamento & purificação
8.
J Oral Pathol Med ; 42(7): 535-40, 2013 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-23278174

RESUMO

BACKGROUND: Deficient immune response in the cervical lymph nodes of patients with head and neck squamous cell carcinoma may contribute to dissemination of metastatic neoplastic cells. This study evaluates the immune response in cervical lymph nodes from patients with primary oral cavity squamous cell carcinoma (OCSCC). METHODS: The density of immature (CD1a(+)) and mature (CD83(+)) dendritic cells (DCs), cytotoxic T lymphocytes CD8(+) /perforin(+) (CTLs), and Foxp3(+) regulatory T (Tregs) cells in the lymph nodes of patients with OCSCC without cervical lymph node metastases (LN1) (negative) (n = 10) were identified through immunohistochemistry. From patients with cervical lymph node metastases, samples were obtained of lymph nodes both with (LM2) (positive) (n = 10) and without (LN2) (negative) (n = 10) metastases. RESULTS: The results demonstrated that the number of CD1a(+) and Foxp3(+) cells was significantly higher in the LM2 group than in either the LN1 or the LN2 group. In addition, the number of CD8(+) /perforin(+) and CD83(+) cells was significantly lower in the LM2 group than in the other groups. CONCLUSION: The results of this study demonstrate a higher density of immature DCs and Tregs cells and a lower density of mature DCs and activated CTLs in metastatic than in non-metastatic lymph nodes. These findings might indicate an immunosuppressive microenvironment, which could be involved in the spread of neoplastic cells to cervical lymph nodes.


Assuntos
Carcinoma de Células Escamosas/imunologia , Linfonodos/imunologia , Neoplasias Bucais/imunologia , Adulto , Idoso , Idoso de 80 Anos ou mais , Antígenos CD/análise , Antígenos CD1/análise , Antígenos CD8/análise , Linfócitos T CD8-Positivos/imunologia , Carcinoma de Células Escamosas/patologia , Contagem de Células , Células Dendríticas/imunologia , Feminino , Seguimentos , Fatores de Transcrição Forkhead/análise , Humanos , Tolerância Imunológica/imunologia , Imunoglobulinas/análise , Metástase Linfática/imunologia , Metástase Linfática/patologia , Ativação Linfocitária/imunologia , Masculino , Glicoproteínas de Membrana/análise , Pessoa de Meia-Idade , Neoplasias Bucais/patologia , Pescoço , Perforina , Proteínas Citotóxicas Formadoras de Poros/análise , Estudos Retrospectivos , Linfócitos T Citotóxicos/imunologia , Linfócitos T Reguladores/imunologia , Microambiente Tumoral/imunologia , Adulto Jovem , Antígeno CD83
9.
World J Microbiol Biotechnol ; 28(5): 1863-70, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22806009

RESUMO

Meat commonly contain the same Aeromonas spp. which occur in human diarrhoeal and non-diarrhoeal faecal samples. Motile Aeromonas were isolated from 5.6% of total 302 samples. The distribution of the isolates were 5.9 and 5.2% in fresh and frozen samples, respectively. Of the 302 samples taken of the four animal meat species investigated, the genus Aeromonas were isolated in 12.3% of the fresh samples collected from buffalo meat, in 6.5% of the samples collected from sheep meat and 14.0% from the samples collected from the cattle frozen meat samples. The camel meat did not reveal any Aeromonas isolates. Aeromonas hydrophila was isolated as the most prevalent species with 6.8%, followed by Aeromonas caviae with 2.7% and Aeromonas sobria with 2.1% from the total meat samples. Aerolysin toxin gene (aerA) was detected in 3/17 isolates of A. hydrophila isolated from contaminated meat. Infection due to bacterial pathogen with such virulent factor through contact with contaminated meat while handling them, poses health hazards to humans.


Assuntos
Aeromonas/isolamento & purificação , Toxinas Bacterianas/análise , Carne/microbiologia , Proteínas Citotóxicas Formadoras de Poros/análise , Fatores de Virulência/análise , Aeromonas/classificação , Aeromonas/genética , Animais , Toxinas Bacterianas/genética , Búfalos , Camelus , Bovinos , Egito , Proteínas Citotóxicas Formadoras de Poros/genética , Prevalência , Ovinos , Fatores de Virulência/genética
10.
Sci Rep ; 12(1): 2013, 2022 02 07.
Artigo em Inglês | MEDLINE | ID: mdl-35132124

RESUMO

Many pore-forming proteins originating from pathogenic bacteria are toxic against agricultural pests. They are the key ingredients in several pesticidal products for agricultural use, including transgenic crops. There is an urgent need to identify novel pore-forming proteins to combat development of resistance in pests to existing products, and to develop products that are effective against a broader range of pests. Existing computational methodologies to search for these proteins rely on sequence homology-based approaches. These approaches are based on similarities between protein sequences, and thus are limited in their usefulness for discovering novel proteins. In this paper, we outline a novel deep learning model trained on pore-forming proteins from the public domain. We compare different ways of encoding protein information during training, and contrast it with traditional approaches. We show that our model is capable of identifying known pore formers with no sequence similarity to the proteins used to train the model, and therefore holds promise for identifying novel pore formers.


Assuntos
Aprendizado Profundo , Praguicidas , Proteínas Citotóxicas Formadoras de Poros/análise , Sequência de Aminoácidos , Bactérias/metabolismo , Bactérias/patogenicidade , Produtos Agrícolas , Proteínas Citotóxicas Formadoras de Poros/química
11.
J Proteome Res ; 10(4): 1603-20, 2011 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-21247065

RESUMO

Cytotoxic T cells mobilize effector proteins from prestored lysosomal compartments. Since different activation signals result in alternative routes of target cell killing, utilizing either FasL or the granzyme B/perforin pathway, the existence of distinct forms of effector granules was recently suggested. Applying a protocol for the separation of intact organelles from activated T lymphoblasts, we noticed that FasL-associated secretory lysosomes (SL) segregate from vesicles containing larger amounts of granzymes and granulysin. We previously analyzed the proteome of secretory lysosomes from NK and T cells and now describe the proteome of granzyme-containing vesicles. Moreover, intact FasL-associated SL and granzyme-containing vesicles were compared by electron microscopy and respective extracts were characterized by Western blotting. With the present report, we provide a comprehensive proteome map of granzyme-containing granules and unequivocally demonstrate that T lymphoblasts contain at least two distinct types of effector vesicles. Moreover, the overall protein content of the two vesicle populations was compared by 2D difference gel electrophoresis. Interestingly, the observed differences in protein distribution were not restricted to effector proteins but also applied to cytoskeleton-associated elements that could argue for a differential transport or initiation of degranulation. To our knowledge, this is the first comprehensive description of distinct effector granules in T cells.


Assuntos
Grânulos Citoplasmáticos/química , Proteínas Citotóxicas Formadoras de Poros/análise , Linfócitos T Citotóxicos/química , Linfócitos T Citotóxicos/citologia , Animais , Grânulos Citoplasmáticos/imunologia , Grânulos Citoplasmáticos/ultraestrutura , Proteína Ligante Fas/análise , Granzimas/análise , Humanos , Dados de Sequência Molecular , Organelas/química , Organelas/ultraestrutura , Proteoma/análise , Proteômica/métodos , Frações Subcelulares/química , Eletroforese em Gel Diferencial Bidimensional
12.
Zhongguo Dang Dai Er Ke Za Zhi ; 13(3): 223-6, 2011 Mar.
Artigo em Zh | MEDLINE | ID: mdl-21426642

RESUMO

OBJECTIVE: To study the expression of perforin and granzyme B (GzmB) in the lungs of asthmatic rats and the effect of recombinant human growth hormone (rhGH) on the expression. METHODS: Thirty Sprague-Dawley male rats were randomly divided into a normal control group and asthma groups with and without rhGH treatment. An asthma model was prepared by repeated sensitization with ovalbumin and aluminium hydroxide. The morphological changes of the airway were observed by hematoxylin and eosin staining. Terminal deoxyribonucleotide transferase-mediated Dutp-bintin (TUNLE) was used to detect the apoptosis of epithelial cells in the airway. RT-PCR was used to detect the mRNA transcripts of perforin and GzmB in the lung tissues. RESULTS: A significantly increased apoptosis rate of airway epithelial cells was noted in the untreated asthma group. The apoptosis rate was significantly ruduced in the rhGH-treated asthma group (P<0.05). Compared with the control group, perforin and GzmB expression in the lungs in the untreated asthma group increased significantly. The rhGH-treated asthma group demonstrated significantly decreased perforin (0.48 ± 0.08 vs 0.63 ± 0.08; P<0.05) and GzmB (0.44 ± 0.13 vs 0.71 ± 0.15; P<0.05) expression in the lungs compared with the untreated asthma group. Both PFP (r=0.800, P<0.05) and GzmB (r=0.806, P<0.01) were positively correlated with the apoptosis rate of airway epithelial cells. CONCLUSIONS: Perforin and GzmB may play important roles in the pathogenesis of asthma. rhGH treatment can inhibit apoptosis of airway epithelial cells and airway remodeling, possibly through a reduction in perforin and GzmB expression.


Assuntos
Asma/metabolismo , Granzimas/análise , Hormônio do Crescimento Humano/farmacologia , Proteínas Citotóxicas Formadoras de Poros/análise , Animais , Apoptose , Brônquios/patologia , Granzimas/genética , Masculino , Proteínas Citotóxicas Formadoras de Poros/genética , RNA Mensageiro/análise , Ratos , Ratos Sprague-Dawley
13.
Eur J Dermatol ; 31(1): 22-31, 2021 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-33586659

RESUMO

BACKGROUND: The upper follicular compartment, a well-known reservoir of cutaneous microbiota, constitutes a space for intensive cross-barrier dialogue. The lower follicle comprises the bulb and bulge, structures with relative immune-privileged status, crucial for physiological cycling, and widely considered to be microbial-free. OBJECTIVES: Following our initial immunohistochemical screening for regulatory cytokines and defensin expression in anagen hair follicles, we aimed to confirm our results with a follow-up ELISA investigation. We postulated that exposure to microbial components may trigger expression, and thus opted to investigate microbial presence in this area. MATERIALS & METHODS: We performed immunohistochemical staining for selected cytokines and antimicrobial peptides, and Gram and Giemsa staining on tissue sections from healthy individuals. Based on ELISA analyses, we confirmed a marked presence of IL-17A- and HBD2 in infrainfundibular compartments from plucked anagen hair follicles of 12 individuals (six females, six males; frontal and occipital scalp sites). 16S rRNA sequencing on microbial DNA extracted from lower follicles, as well as fluorescence in situ hybridization (FISH) were applied to explore bacterial presence in the infrainfundibular compartments. RESULTS: 16S rRNA sequencing yielded reproducible data of bacterial presence in infrainfundibular compartments of plucked scalp follicles; Lawsonella clevelandensis, Staphylococcaceae and Propionibacteriaceae were the most abundant bacteria. Also, FISH revealed biofilm structures formed by Cutibacterium acnes (formerly Propionibacterium acnes) and Staphylococcus sp. below the infundibulum. CONCLUSION: As the skin microbiome largely influences the local immune system, the presence of bacteria in proximity to follicular immune-privileged areas may be of relevance to hair cycling in health and disease.


Assuntos
DNA Bacteriano/análise , Folículo Piloso/química , Proteínas Citotóxicas Formadoras de Poros/análise , Adulto , Feminino , Humanos , Masculino , Couro Cabeludo , Adulto Jovem
14.
Clin Nutr ; 40(3): 1214-1223, 2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-32800606

RESUMO

BACKGROUND & AIMS: Preterm infants are born with a gastrointestinal tract insufficiently developed to digesting large quantities of human milk proteins. Peptides released from the digestion of human milk proteins have been identified with bioactivities that may be beneficial to the developing infant. However, it is unknown how prematurity affects total and bioactive peptide release along the gastrointestinal tract. The aim of this study was to compare milk peptide release from milk to stomach to stool between preterm and term infants. METHODS: Milk, gastric, and stool samples were collected from preterm infants as early collection (days 8 and 9 of life) and late collection (days 21 and 22 of life), and from term infants as early collection. Milk peptides were extracted from the samples and identified using Orbitrap mass spectrometry. Peptide abundance and count were compared across digestion and between the three infant groups at each stage of digestion. RESULTS: Total milk peptide count and abundance increased from milk to stomach then decreased in stool. Total peptide release was similar among the three infant groups for milk and stool samples. In the stomach, preterm early collection had significantly higher peptide abundance and count than the other two groups. Patterns for peptide release from individual milk proteins were distinct from total peptide release both across digestion and among the infant groups. When analyzing single peptides, term early collection gastric samples had significantly higher peptide abundance than preterm early collection for a known antimicrobial peptide, QELLLNPTHQIYPVTQPLAPVHNPISV. CONCLUSIONS: Preterm and term infants digest milk proteins differently along their gastrointestinal tracts. While preterm infants released more total peptides in the stomach, term infants released specific bioactive peptides at higher abundance. We identified a region at the C-terminus of ß-casein that is conserved from milk through stool and from which are released known and potential antimicrobial peptides.


Assuntos
Digestão/fisiologia , Trato Gastrointestinal/metabolismo , Recém-Nascido Prematuro/metabolismo , Proteínas do Leite/metabolismo , Leite Humano/química , Peptídeos/metabolismo , Sequência de Aminoácidos , Aminoácidos/análise , Caseínas/química , Caseínas/metabolismo , Fezes/química , Conteúdo Gastrointestinal/química , Idade Gestacional , Humanos , Recém-Nascido , Peptídeos/análise , Peptídeos/química , Proteínas Citotóxicas Formadoras de Poros/análise , Proteínas Citotóxicas Formadoras de Poros/química
15.
Biotechnol Prog ; 36(1): e2896, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31443134

RESUMO

Continuous reports of foodborne illnesses worldwide and the prevalence of antibiotic-resistant bacteria mandate novel interventions to assure the safety of our food. Treatment of a variety of foods with bacteriophage-derived lysins and bacteriocin-class antimicrobial proteins has been shown to protect against high-risk pathogens at multiple intervention points along the food supply chain. The most significant barrier to the adoption of antimicrobial proteins as a food safety intervention by the food industry is the high production cost using current fermentation-based approaches. Recently, plants have been shown to produce antimicrobial proteins with accumulation as high as 3 g/kg fresh weight and with demonstrated activity against major foodborne pathogens. To investigate potential economic advantages and scalability of this novel platform, we evaluated a highly efficient transgenic plant-based production process. A detailed process simulation model was developed to help identify economic "hot spots" for research and development focus including process operating parameters, unit operations, consumables, and/or raw materials that have the most significant impact on production costs. Our analyses indicate that the unit production cost of antimicrobial proteins in plants at commercial scale for three scenarios is $3.00-6.88/g, which can support a competitive selling price to traditional food safety treatments.


Assuntos
Custos e Análise de Custo , Plantas Geneticamente Modificadas/química , Proteínas Citotóxicas Formadoras de Poros/economia , Inocuidade dos Alimentos , Doenças Transmitidas por Alimentos , Proteínas Citotóxicas Formadoras de Poros/análise , Proteínas Citotóxicas Formadoras de Poros/biossíntese
16.
Poult Sci ; 99(1): 526-535, 2020 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-32416839

RESUMO

The gene coding for antimicrobial peptides produced by probiotic Lactobacillus reuteri KUB-AC5 located on the cloned DNA fragment I-C46 containing 2 open reading frames I-C46-F2.1 and I-C46-F2.2 were designed for strain-specific primers P1 and P2, respectively, and assessed by real-time quantitative polymerase chain reaction. According to the obtained results, primer P1 has limited strain specificity. Primer P2 exhibited high efficacy and specificity at annealing temperature of 70°C while P1 annealed at 57°C causing nonspecific bands. Hence, P2 was selected for quantitative polymerase chain reaction assay by isothermal annealing and extension reaction at high temperature of 70°C resulting in linearity for its DNA sequences ranging from 102 to 107 target copy numbers per assay, and displaying a detection limit of 6.17 log cfu/g of cecal digesta. Using spike testing, this system was able to detect 7.88 ± 0.06 to 11.78 ± 0.06 log copy number/g of digesta, higher than cultivation assay at about 1 log cfu/g, with good correlation of 0.99. These results suggested possible detection of strain KUB-AC5 in the gastrointestinal tract of chicken to evaluate the efficacy and persistence of a probiotic strain which requires correct inclusion rates in the feed.


Assuntos
Galinhas/genética , Limosilactobacillus reuteri/isolamento & purificação , Proteínas Citotóxicas Formadoras de Poros/análise , Probióticos/análise , Reação em Cadeia da Polimerase em Tempo Real/veterinária , Animais , Galinhas/microbiologia , Intestinos/microbiologia , Reação em Cadeia da Polimerase em Tempo Real/métodos
17.
Biomolecules ; 10(7)2020 07 17.
Artigo em Inglês | MEDLINE | ID: mdl-32709016

RESUMO

The Droserasins, aspartic proteases from the carnivorous plant Drosera capensis, contain a 100-residue plant-specific insert (PSI) that is post-translationally cleaved and independently acts as an antimicrobial peptide. PSIs are of interest not only for their inhibition of microbial growth, but also because they modify the size of lipid vesicles and strongly interact with biological membranes. PSIs may therefore be useful for modulating lipid systems in NMR studies of membrane proteins. Here we present the expression and biophysical characterization of the Droserasin 1 PSI (D1 PSI.) This peptide is monomeric in solution and maintains its primarily α -helical secondary structure over a wide range of temperatures and pH values, even under conditions where its three disulfide bonds are reduced. Vesicle fusion assays indicate that the D1 PSI strongly interacts with bacterial and fungal lipids at pH 5 and lower, consistent with the physiological pH of D. capensis mucilage. It binds lipids with a variety of head groups, highlighting its versatility as a potential stabilizer for lipid nanodiscs. Solid-state NMR spectra collected at a field strength of 36 T, using a unique series-connected hybrid magnet, indicate that the peptide is folded and strongly bound to the membrane. Molecular dynamics simulations indicate that the peptide is stable as either a monomer or a dimer in a lipid bilayer. Both the monomer and the dimer allow the passage of water through the membrane, albeit at different rates.


Assuntos
Planta Carnívora/metabolismo , Drosera/metabolismo , Bicamadas Lipídicas/metabolismo , Proteínas Citotóxicas Formadoras de Poros/metabolismo , Planta Carnívora/química , Membrana Celular/metabolismo , Drosera/química , Fusão de Membrana , Simulação de Dinâmica Molecular , Proteínas Citotóxicas Formadoras de Poros/análise , Conformação Proteica em alfa-Hélice , Multimerização Proteica
18.
Front Immunol ; 11: 620707, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33613550

RESUMO

Wound infection is a common and serious medical condition with an unmet need for improved diagnostic tools. A peptidomic approach, aided by mass spectrometry and bioinformatics, could provide novel means of identifying new peptide biomarkers for wound healing and infection assessment. Wound fluid is suitable for peptidomic analysis since it is both intimately tied to the wound environment and is readily available. In this study we investigate the peptidomes of wound fluids derived from surgical drainages following mastectomy and from wound dressings following facial skin grafting. By applying sorting algorithms and open source third party software to peptidomic label free tandem mass spectrometry data we provide an unbiased general methodology for analyzing and differentiating between peptidomes. We show that the wound fluid peptidomes of patients are highly individualized. However, differences emerge when grouping the patients depending on wound type. Furthermore, the abundance of peptides originating from documented antimicrobial regions of hemoglobin in infected wounds may contribute to an antimicrobial wound environment, as determined by in silico analysis. We validate our findings by compiling literature on peptide biomarkers and peptides of physiological significance and cross checking the results against our dataset, demonstrating that well-documented peptides of immunological significance are abundant in infected wounds, and originate from certain distinct regions in proteins such as hemoglobin and fibrinogen. Ultimately, we have demonstrated the power using sorting algorithms and open source software to help yield insights and visualize peptidomic data.


Assuntos
Biomarcadores/análise , Líquidos Corporais/química , Biologia Computacional/métodos , Proteínas Citotóxicas Formadoras de Poros/análise , Proteoma/análise , Ferimentos e Lesões/metabolismo , Algoritmos , Sequência de Aminoácidos , Cromatografia Líquida , Simulação por Computador , Drenagem , Face/cirurgia , Feminino , Hemoglobinas/química , Humanos , Mastectomia , Redes Neurais de Computação , Fragmentos de Peptídeos/análise , Plasma , Proteoma/isolamento & purificação , Alinhamento de Sequência , Transplante de Pele , Infecções Estafilocócicas/metabolismo , Infecção da Ferida Cirúrgica/metabolismo , Espectrometria de Massas em Tandem
19.
Eur J Med Res ; 25(1): 33, 2020 Aug 17.
Artigo em Inglês | MEDLINE | ID: mdl-32799924

RESUMO

BACKGROUND: Safe diagnosis of periprosthetic joint infection (PJI) is of utmost importance for successful exchange arthroplasty. However, current diagnostic tools show insufficient accuracy in the clinically common and challenging chronic low-grade infections. To close this diagnostic gap, reliable (bio)markers display the most promising candidates. Antimicrobial peptides (AMPs) are part of the innate immune response towards microbial growth. Recently we could show significant intraarticular levels of human cathelicidin LL-37 and ß-defensin-3 (HBD-3) with high diagnostic accuracy in PJI synovial fluid. Consequently, these promising biomarkers were evaluated in PJI synovial membrane and synoviocytes, which may significantly facilitate histological diagnosis of PJI to improve outcome of septic joint replacement. METHODS: In this prospective single-center controlled clinical study (diagnostic level II), consecutive patients with total hip (THR) and knee (TKR) replacements were included undergoing primary arthroplasty (n = 8), surgical revision due to aseptic loosening (n = 9) and septic arthroplasty with coagulase-negative staphylococci (n = 8) according to the criteria of the Musculoskeletal Infection Society (MSIS). Semiquantitative immunohistochemical (IHC) analysis of LL-37, HBD-3 and HBD-2 in synovial membrane and isolated synoviocytes based on Total Allred Score (TS) and Immunoreactive Remmele and Stegner score (IRS) was performed. For statistical analysis, SPSS 26.0/R3.6.3 (p < 0.05) was used. RESULTS: The AMPs LL-37 and HBD-3 were significantly elevated (up to 20×) in synovial membranes from PJI compared to aseptic loosening or primary arthroplasty. The area under the curve (AUC) in a receiver operating characteristic curve analysis was equal to 1.0 for both scores revealing excellent diagnostic accuracy. Isolated synoviocytes as cellular AMP source showed comparable results with a significant LL-37/HBD-3-increase up to 3 × in PJI. In contrast, local HBD-2 levels were negligible (p > 0.23) upon PJI with a lower diagnostic accuracy (AUC = 0.65) in analogy to our previous findings with synovial fluid. CONCLUSIONS: Our results implicate AMPs as promising and specific biomarkers for the histological diagnosis of PJI.


Assuntos
Artrite Infecciosa/diagnóstico , Artroplastia de Quadril/efeitos adversos , Proteínas Citotóxicas Formadoras de Poros/metabolismo , Infecções Relacionadas à Prótese/diagnóstico , Infecções Estafilocócicas/diagnóstico , Staphylococcus epidermidis/isolamento & purificação , Membrana Sinovial/metabolismo , Artrite Infecciosa/epidemiologia , Artrite Infecciosa/metabolismo , Artrite Infecciosa/microbiologia , Alemanha/epidemiologia , Humanos , Proteínas Citotóxicas Formadoras de Poros/análise , Estudos Prospectivos , Infecções Relacionadas à Prótese/epidemiologia , Infecções Relacionadas à Prótese/metabolismo , Infecções Relacionadas à Prótese/microbiologia , Infecções Estafilocócicas/epidemiologia , Infecções Estafilocócicas/metabolismo , Infecções Estafilocócicas/microbiologia
20.
Sci Rep ; 10(1): 12018, 2020 07 21.
Artigo em Inglês | MEDLINE | ID: mdl-32694552

RESUMO

There is much interest in the role of innate immune system proteins (antimicrobial peptides) in the inflammatory process associated with spontaneous preterm birth (sPTB). After promising pilot work, we aimed to validate the association between the antimicrobial peptides/proteins elafin and cathelicidin and sPTB. An observational cohort study of 405 women at high-risk, and 214 women at low-risk of sPTB. Protein concentrations of elafin and cathelicidin, and the enzyme human neutrophil elastase (HNE) were measured in over 1,000 cervicovaginal fluid (CVF) samples (10 to 24 weeks' gestation). Adjusted CVF cathelicidin and HNE concentrations (but not elafin) were raised in high-risk women who developed cervical shortening and who delivered prematurely and were predictive of sPTB < 37 weeks, with an area under the curve (AUC) of 0.75 (95% CI 0.68 to 0.81) for cathelicidin concentration at 14 to 15+6 weeks. Elafin concentrations were affected by gestation, body mass index and smoking. CVF elafin in early pregnancy was modestly predictive of sPTB < 34 weeks (AUC 0.63, 0.56-0.70). Alterations in innate immune response proteins in early pregnancy are predictive of sPTB. Further investigation is warranted to understand the drivers for this, and their potential to contribute towards clinically useful prediction techniques.


Assuntos
Líquidos Corporais/metabolismo , Colo do Útero/metabolismo , Proteínas Citotóxicas Formadoras de Poros/metabolismo , Nascimento Prematuro/metabolismo , Vagina/metabolismo , Adulto , Peptídeos Catiônicos Antimicrobianos/análise , Peptídeos Catiônicos Antimicrobianos/metabolismo , Líquidos Corporais/imunologia , Estudos de Casos e Controles , Colo do Útero/imunologia , Estudos de Coortes , Elafina/análise , Elafina/metabolismo , Feminino , Idade Gestacional , Humanos , Imunidade Inata , Elastase de Leucócito/análise , Elastase de Leucócito/metabolismo , Proteínas Citotóxicas Formadoras de Poros/análise , Gravidez , Estudos Prospectivos , Fatores de Risco , Vagina/imunologia , Catelicidinas
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