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Mapping molecular HLA typing data to UNOS antigen equivalents.
Kaur, Navchetan; Kransdorf, Evan P; Pando, Marcelo J; Maiers, Martin; Ray, Bryan; Lee, Jar-How; Lalli, Peter; Murphey, Cathi L; Bray, Robert A; Gragert, Loren.
Afiliação
  • Kaur N; Department of Pathology and Laboratory Medicine, Tulane Cancer Center, Tulane University School of Medicine, New Orleans, USA.
  • Kransdorf EP; Cedars-Sinai Heart Institute, Cedars Sinai Medical Center, Los Angeles, CA, USA.
  • Pando MJ; Department of Surgery, Division of Transplant, Baylor Scott & White, Temple, TX, USA.
  • Maiers M; Center for International Blood and Marrow Transplant Research, Minneapolis, MN, USA; National Marrow Donor Program / Be The Match, Minneapolis, MN, USA.
  • Ray B; Immucor Inc., Norcross, GA, USA.
  • Lee JH; Thermo Fisher Scientific., Canoga Park, CA, USA.
  • Lalli P; Carolinas Healthcare System, Charlotte, NC, USA.
  • Murphey CL; Southwest Immunodiagnostics, Inc., San Antonio, TX, USA.
  • Bray RA; Department of Pathology and Laboratory Medicine, Emory University Hospital, Atlanta, GA, USA.
  • Gragert L; Department of Pathology and Laboratory Medicine, Tulane Cancer Center, Tulane University School of Medicine, New Orleans, USA. Electronic address: lgragert@tulane.edu.
Hum Immunol ; 79(11): 781-789, 2018 Nov.
Article em En | MEDLINE | ID: mdl-30118777
ABSTRACT

BACKGROUND:

Histocompatibility labs must convert molecular HLA typing data to antigen equivalencies for entry into the United Network for Organ Sharing (UNOS) UNet system. While an Organ Procurement and Transplantation Network (OPTN) policy document provides general guidelines for conversion, the process is complex because no antigen mapping table is available. We present a UNOS antigen equivalency table for all IPD-IMGT/HLA alleles at the A, B, C, DRB1, DRB3/4/5, DQA1, and DQB1 loci.

METHODS:

An automated script was developed to generate a UNOS antigen equivalency table. Data sources used in the conversion algorithm included the World Marrow Donor Association (WMDA) antigen table, the HLA Dictionary, and UNOS-provided tables. To validate antigen mappings, we converted National Marrow Donor Program (NMDP) high resolution allele frequencies to antigen equivalents and compared with the UNOS Calculated Panel Reactive Antibodies (CPRA) reference panel.

RESULTS:

Normalized frequency similarity scores between independent NMDP and UNOS panels for 4 US population categories (Caucasian, Hispanic, African American and Asian/Pacific Islander) ranged from 0.85 to 0.97, indicating correct antigen mapping. An open source web application (ALLele to ANtigen ("ALLAN")) and web services were also developed to map unambiguous and ambiguous HLA typing data to UNOS antigen equivalents based on NMDP population-specific allele frequencies (http//www.transplanttoolbox.org).

CONCLUSIONS:

Computer-assisted interpretation of molecular HLA data may aid in reducing typing discrepancies in UNet. This work also sets a foundation for molecular typing data to be utilized directly in the UNet match run as well as the virtual crossmatch process at transplant centers.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Teste de Histocompatibilidade / Mapeamento Cromossômico / Antígenos HLA País/Região como assunto: America do norte Idioma: En Ano de publicação: 2018 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Teste de Histocompatibilidade / Mapeamento Cromossômico / Antígenos HLA País/Região como assunto: America do norte Idioma: En Ano de publicação: 2018 Tipo de documento: Article País de afiliação: Estados Unidos