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Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom.
Nowinski, Brent; Smith, Christa B; Thomas, Courtney M; Esson, Kaitlin; Marin, Roman; Preston, Christina M; Birch, James M; Scholin, Christopher A; Huntemann, Marcel; Clum, Alicia; Foster, Brian; Foster, Bryce; Roux, Simon; Palaniappan, Krishnaveni; Varghese, Neha; Mukherjee, Supratim; Reddy, T B K; Daum, Chris; Copeland, Alex; Chen, I-Min A; Ivanova, Natalia N; Kyrpides, Nikos C; Glavina Del Rio, Tijana; Whitman, William B; Kiene, Ronald P; Eloe-Fadrosh, Emiley A; Moran, Mary Ann.
Afiliação
  • Nowinski B; Department of Marine Sciences, University of Georgia, Athens, GA, 30602, USA.
  • Smith CB; Department of Marine Sciences, University of Georgia, Athens, GA, 30602, USA.
  • Thomas CM; Department of Marine Sciences, University of Georgia, Athens, GA, 30602, USA.
  • Esson K; Department of Marine Sciences, University of South Alabama, Mobile, AL, 36688, USA.
  • Marin R; Dauphin Island Sea Lab, Dauphin Island, AL, 36528, USA.
  • Preston CM; Monterey Bay Aquarium Research Institute, Moss Landing, CA, 95039, USA.
  • Birch JM; Monterey Bay Aquarium Research Institute, Moss Landing, CA, 95039, USA.
  • Scholin CA; Monterey Bay Aquarium Research Institute, Moss Landing, CA, 95039, USA.
  • Huntemann M; Monterey Bay Aquarium Research Institute, Moss Landing, CA, 95039, USA.
  • Clum A; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Foster B; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Foster B; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Roux S; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Palaniappan K; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Varghese N; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Mukherjee S; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Reddy TBK; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Daum C; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Copeland A; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Chen IA; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Ivanova NN; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Kyrpides NC; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Glavina Del Rio T; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Whitman WB; Department of Energy, Joint Genome Institute, Walnut Creek, California, 94598, USA.
  • Kiene RP; Department of Microbiology, University of Georgia, Athens, GA, 30602, USA.
  • Eloe-Fadrosh EA; Department of Marine Sciences, University of South Alabama, Mobile, AL, 36688, USA.
  • Moran MA; Dauphin Island Sea Lab, Dauphin Island, AL, 36528, USA.
Sci Data ; 6(1): 129, 2019 07 22.
Article em En | MEDLINE | ID: mdl-31332186
ABSTRACT
Metagenomic and metatranscriptomic time-series data covering a 52-day period in the fall of 2016 provide an inventory of bacterial and archaeal community genes, transcripts, and taxonomy during an intense dinoflagellate bloom in Monterey Bay, CA, USA. The dataset comprises 84 metagenomes (0.8 terabases), 82 metatranscriptomes (1.1 terabases), and 88 16S rRNA amplicon libraries from samples collected on 41 dates. The dataset also includes 88 18S rRNA amplicon libraries, characterizing the taxonomy of the eukaryotic community during the bloom. Accompanying the sequence data are chemical and biological measurements associated with each sample. These datasets will facilitate studies of the structure and function of marine bacterial communities during episodic phytoplankton blooms.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Bactérias / Dinoflagellida / Archaea / Eutrofização / Metagenoma / Transcriptoma País/Região como assunto: America do norte Idioma: En Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Estados Unidos
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Bactérias / Dinoflagellida / Archaea / Eutrofização / Metagenoma / Transcriptoma País/Região como assunto: America do norte Idioma: En Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Estados Unidos