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Integrated Analysis of lncRNA-mRNA Regulatory Networks Related to Lipid Metabolism in High-Oleic-Acid Rapeseed.
Wang, Xiaodan; Zhao, Dongfang; Li, Xi; Zhou, Bingqian; Chang, Tao; Hong, Bo; Guan, Chunyun; Guan, Mei.
Afiliação
  • Wang X; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
  • Zhao D; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
  • Li X; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
  • Zhou B; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
  • Chang T; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
  • Hong B; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
  • Guan C; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
  • Guan M; College of Agriculture, Hunan Agricultural University, Hunan Branch of National Oilseed Crops Improvement Center, Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, Changsha 410128, China.
Int J Mol Sci ; 24(7)2023 Mar 27.
Article em En | MEDLINE | ID: mdl-37047249
A high oleic acid content is considered an essential characteristic in the breeding of high-quality rapeseed in China. Long-chain non-coding RNA (lncRNA) molecules play an important role in the plant's growth and its response to stress. To better understand the role of lncRNAs in regulating plant reproductive development, we analyzed whole-transcriptome and physiological data to characterize the dynamic changes in lncRNA expression during the four representative times of seed development of high- and low-oleic-acid rapeseed in three regions. We identified 21 and 14 lncRNA and mRNA modules, respectively. These modules were divided into three types related to region, development stages, and material. Next, we analyzed the key modules related to the oil content and the oleic acid, linoleic acid, and linolenic acid contents with physiological data and constructed the key functional network analysis on this basis. Genes related to lipid metabolism, such as 3-ketoacyl-CoA synthase 16 (KCS16) and acyl-CoA:diacylglycerol acyltransferase 1 (DGAT1), were present in the co-expression network, suggesting that the effect of these genes on lipid metabolism might be embodied by the expression of these lncRNAs. Our results provide a fresh insight into region-, development-stage-, and material-biased changes in lncRNA expression in the seeds of Brassica napus. Some of these lncRNAs may participate in the regulatory network of lipid accumulation and metabolism, together with regulated genes. These results may help elucidate the regulatory system of lncRNAs in the lipid metabolism of high-oleic-acid rapeseed seeds.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Brassica napus / Brassica rapa / RNA Longo não Codificante Idioma: En Ano de publicação: 2023 Tipo de documento: Article País de afiliação: China

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Brassica napus / Brassica rapa / RNA Longo não Codificante Idioma: En Ano de publicação: 2023 Tipo de documento: Article País de afiliação: China