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1.
Nat Genet ; 2(1): 80-3, 1992 Sep.
Article in English | MEDLINE | ID: mdl-1284644

ABSTRACT

Pallid is one of 12 independent murine mutations with a prolonged bleeding time that are models for human platelet storage pool deficiencies in which several intracellular organelles are abnormal. We have mapped the murine gene for protein 4.2 (Epb4.2) to chromosome 2 where it co-localizes with pallid. Southern blot analyses suggest that pallid is a mutation in the Epb4.2 gene. Northern blot analyses demonstrate a smaller than normal Epb4.2 transcript in affected pallid tissues, such as kidney and skin. This is the first gene defect to be associated with a platelet storage pool deficiency, and may allow the identification of a novel structure or biological pathway that influences granulogenesis.


Subject(s)
Blood Proteins/genetics , Platelet Storage Pool Deficiency/genetics , Animals , Chromosome Mapping , Cytoskeletal Proteins , DNA/genetics , Disease Models, Animal , Gene Expression , Humans , Membrane Proteins , Mice , Mutation , Phenotype , RNA/genetics
2.
J Endocrinol ; 126(1): 51-8, 1990 Jul.
Article in English | MEDLINE | ID: mdl-1696305

ABSTRACT

We have investigated thyroid structure and function in mice homozygous for the chromosome 15 mutation, congenital goitre (cog). Abnormal thyroidal hypertrophy and reduced iodine uptake in cog/cog mice were observed as early as day 18 of gestation, corresponding to the onset of thyroid function. Growth continued unabated in mutants throughout the 10-month period of observation. By 2 months of age, thyroid cell hypertrophy obliterated nearly all follicular lumina in cog/cog glands and by 10 months mean mutant thyroid mass exceeded that of age-matched littermates. Twenty-fold serum concentrations of thyrotrophin were significantly increased at all ages examined. While wild type (+/+) and heterozygote (+/cog) mice are indistinguishable from each other, thyroids of homozygote mutants (cog/cog) and the +/cog type are easily discernible from thyroids of the +/+ type by microscopic and thyroglobulin (Tg) analyses. Thyrofollicular cells of both cog/cog and +/cog genotypes contain large vesicles of accumulated, nonglycosylated proteinaceous material not observed in cells from +/+ mice. Autoradiography showed 125I was incorporated only into Tg within recognizable follicular lumina of thyroids from +/cog mice. Serum concentrations of tri-iodothyronine are depressed during development in cog/cog mice. Serum concentrations of thyroxine are depressed during postnatal development but increase progressively to normal concentrations by 10 months of age. Our analyses indicate that full size Tg is produced in thyroid cells from cog/cog mice, though in a greatly reduced quantity, and that Tgs which are several sizes smaller than normal are also produced in both homozygote and heterozygote thyroids.(ABSTRACT TRUNCATED AT 250 WORDS)


Subject(s)
Goiter/genetics , Thyroglobulin/biosynthesis , Thyroid Gland/pathology , Animals , Female , Fetus , Goiter/blood , Goiter/pathology , Hypertrophy , Iodine Radioisotopes/metabolism , Male , Mice , Mice, Mutant Strains , RNA/analysis , Thyrotropin/blood , Thyroxine/blood , Time Factors , Triiodothyronine/blood
3.
Am Surg ; 61(3): 231-6, 1995 Mar.
Article in English | MEDLINE | ID: mdl-7887536

ABSTRACT

Growth factors have been used experimentally to accelerate wound healing by increasing scar tissue formation at a wound site. These studies suggest that stimulation of fibroblastic differentiation and proliferation are essential components of adult tissue repair. Recent studies report the presence of mesenchymal stem cells within granulation tissue and as connective tissue-resident stem cells. This suggests that mesenchymal stem cells as well as fibroblasts may contribute to wound healing and repair. To determine the potential for mesenchymal stem cells to contribute to nonfibrogenic tissue repair, a clonal population of murine mesenchymal stem cells was examined with dexamethasone, a general differentiation agent, and muscle morphogenetic protein, a specific differentiation-inducing agent. Dexamethasone induced the expression of phenotypic markers for fat, cartilage, and bone in the stem cells. Muscle morphogenetic protein induced the expression of mRNAs for the muscle specific regulatory genes MyoD1 and myogenin in these cells. These results suggest that pluripotent mesenchymal stem cells within connective tissue compartments and granulation tissue have the potential to contribute to functional tissue restoration, rather than contributing solely to fibrogenic scar tissue formation during tissue repair.


Subject(s)
Adipose Tissue/cytology , Bone and Bones/cytology , Cartilage/cytology , Muscles/cytology , Stem Cells/cytology , Animals , Cell Differentiation , Clone Cells , Dexamethasone/pharmacology , Gene Expression Regulation , Mesoderm , Mice , Muscle Proteins/pharmacology , MyoD Protein/genetics , Myogenin/genetics , RNA, Messenger/analysis , Trans-Activators/genetics
5.
Immunol Commun ; 9(8): 759-68, 1980.
Article in English | MEDLINE | ID: mdl-6972346

ABSTRACT

T and B lymphocytes of the Syrian golden hamster were separated from spleen cell preparations on the basis of their differential agglutinability with the lectin soybean agglutinin. Only B lymphocytes were agglutinated by this lectin, and they could be separated from the unagglutinated T lymphocytes by sedimentation through 50% heat inactivated calf serum at unit gravity. The B lymphocyte aggregates could be dissociated into single cells that were viable and functional after treatment with 0.5 M galactose. The isolated cell fractions were characterized by their blastogenic response to various T cell and B cell specific mitogens and by the presence or absence of cell surface IgG.


Subject(s)
B-Lymphocytes/analysis , Chemical Fractionation/methods , Chemistry Techniques, Analytical/methods , Cricetinae/blood , Glycine max , Lectins/pharmacology , Mesocricetus/blood , T-Lymphocytes/analysis , Animals , Cell Separation , Plant Lectins , Receptors, Antigen, B-Cell , Spleen/cytology
6.
Cytogenet Cell Genet ; 47(1-2): 62-5, 1988.
Article in English | MEDLINE | ID: mdl-2895698

ABSTRACT

DNA from bovine x hamster hybrid cells preferentially segregating bovine chromosomes has been analyzed by blot hybridization with alpha and beta interferon probes. Retention or loss of bovine interferon genes was compared to segregation of bovine isozyme loci representing previously described syntenic groups. Families of bovine alpha (IFNA) and beta (IFNB) interferon genes were segregated in concordance with each other and with aconitase-1 (ACO1) on bovine syntenic group U18. This syntenic relationship is conserved on human chromosome 9p and on the portion of mouse chromosome 4 proximal to the centromere. In addition, cattle restriction fragment length polymorphisms were identified with both IFNA and IFNB probes. Of particular interest is a polymorphism apparently due to duplication of IFNB genes.


Subject(s)
Cattle/genetics , Interferon Type I/genetics , Multigene Family , Animals , Chromosome Mapping , Cricetinae , Genes , Genetic Markers , Hybrid Cells , Polymorphism, Restriction Fragment Length
7.
Genomics ; 8(1): 29-34, 1990 Sep.
Article in English | MEDLINE | ID: mdl-2081597

ABSTRACT

Bovine X hamster and bovine X mouse hybrid somatic cells have been used to investigate the syntenic relationship of nine loci in the bovine that have homologous loci on human chromosome 12. Eight loci, including A2M, GLI, HOX3, IFNG, INT1, KRAS2, NKNB, and PAH, were assigned to the previously identified bovine syntenic group U3 represented by GAPD. However, a single locus from the q-terminus of HSA 12, ALDH2, mapped to a new, previously unidentified autosomal syntenic group. These results indicate the existence of a very large ancestral syntenic group spanning from the p-terminus to q24 of HSA 12 and containing over 4% of the mammalian genome. Additionally, the results predict that ALDH2 is distal to PAH and IFNG on HSA 12, the type II keratin gene complex will reside between q11 and q21 of HSA 12, A2M will map to MMU 6, and LALBA and GLI will map to MMU 15.


Subject(s)
Chromosomes, Human, Pair 12 , DNA , Animals , Base Sequence , Blotting, Southern , Cattle , Chromosome Mapping , Cricetinae , DNA/genetics , DNA Probes , Humans , Hybrid Cells , Mice , Sequence Homology, Nucleic Acid
8.
Mamm Genome ; 10(7): 724-9, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10384048

ABSTRACT

Several LINE-1s have been isolated and characterized from genomic DNA of the vole, Microtus kirgisorum. Blot hybridization revealed specific restriction patterns of L1 elements in vole genomes. Rehybridization of the genomic blot with a cloned 5'-end fragment revealed two major bands indicating the presence of two different L1 subfamilies. The copy numbers are estimated for different parts of M. kirgisorum L1 elements. Data also demonstrate that most vole L1 elements are truncated at the 5'-end; however, in contrast to mouse, the ORF1 copy number is higher in vole. A difference between the substitution rates of the ORF1 5'-region (approximately 330 nucleotides) and the rest of the L1 coding regions is revealed.


Subject(s)
Arvicolinae/genetics , Long Interspersed Nucleotide Elements , Amino Acid Sequence , Animals , Base Sequence , Chromosome Walking , DNA , Mice , Molecular Sequence Data , Nucleic Acid Hybridization , Open Reading Frames , Sequence Homology, Amino Acid , Sequence Homology, Nucleic Acid
9.
Cytogenet Cell Genet ; 47(3): 155-9, 1988.
Article in English | MEDLINE | ID: mdl-2897897

ABSTRACT

DNAs from cow-hamster and cow-mouse somatic hybrid cells segregating bovine chromosomes have been analyzed by Southern blotting and hybridization with human fibronectin and gamma crystallin probes. Concordancy of retention of these bovine genes was compared to cattle isozyme loci representing previously described syntenic groups. Bovine fibronectin (FNI) and gamma crystallin (CRYG) fragments were concordant with each other and with isocitrate dehydrogenase 1 (IDH1), representing the bovine syntenic group U17. The syntenic relationship of these genes is conserved on human chromosome 2q and also on mouse chromosome 1. In addition, bovine RFLPs were identified with both fibronectin and gamma crystallin probes. These polymorphisms will be used to study recombination between the syntenic loci in pedigreed herds and to mark a segment of the bovine genome that is likely homologous to the Lsh region of mouse chromosome 1, which confers resistance in mice to several intracellular parasites.


Subject(s)
Cattle/genetics , Chromosome Mapping , Crystallins/genetics , Fibronectins/genetics , Polymorphism, Genetic , Polymorphism, Restriction Fragment Length , Animals , Cricetinae , Cricetulus , Genetic Markers , Hybrid Cells , Mice
10.
Brief Bioinform ; 1(3): 260-74, 2000 Sep.
Article in English | MEDLINE | ID: mdl-11465037

ABSTRACT

The presence of repetitive elements can create serious problems for sequence analysis, especially in the case of homology searches in nucleotide sequence databases. Repetitive elements should be treated carefully by using special programs and databases. In this paper, various aspects of SINE (short interspersed repetitive element) identification, analysis and evolution are discussed.


Subject(s)
Phylogeny , Short Interspersed Nucleotide Elements , Animals , Base Sequence , Computational Biology , Databases, Factual , Evolution, Molecular , Genetic Markers , Humans , Mammals/genetics , Models, Genetic , Molecular Sequence Data , Sequence Alignment/statistics & numerical data , Sequence Analysis/statistics & numerical data , Software
11.
Genomics ; 39(3): 406-8, 1997 Feb 01.
Article in English | MEDLINE | ID: mdl-9119380

ABSTRACT

We report the mapping of the human gene MPB1 (c-myc promoter binding protein), a recently identified gene regulatory protein. MPB1 binds to the c-myc P2 promoter and exerts a negative regulatory role on c-myc transcription. Since exogenous expression from transfection of the MPB1 gene suppresses the tumorigenic property of breast cancer cells, there was interest in determining the chromosomal location of this gene. The human MPB1 gene was assigned to human chromosome 1p35-pter using Southern blot analyses of genomic DNAs from rodent-human somatic hybrid cell lines. A specific human genomic fragment was observed only in the somatic cell lines containing human chromosome 1 or the p35-pter region of the chromosome.


Subject(s)
Chromosomes, Human, Pair 1 , DNA-Binding Proteins , Neoplasm Proteins/genetics , Phosphopyruvate Hydratase , Tumor Suppressor Proteins , Animals , Biomarkers, Tumor , Chromosome Mapping , Cricetinae , Genes, Tumor Suppressor , Humans , Hybrid Cells , Mice
12.
Am J Obstet Gynecol ; 170(3): 952-5, 1994 Mar.
Article in English | MEDLINE | ID: mdl-8141230

ABSTRACT

OBJECTIVE: The objective was to test the reliability of new deoxyribonucleic acid primers that have previously been used very efficiently by this laboratory with amniolysate samples to amplify a 248 bp Y-specific, repeated sequence from maternal blood during pregnancy. STUDY DESIGN: Blood samples were obtained from 50 women during weeks 11 and 16 of pregnancy and were analyzed for the presence of the Y chromosome-specific sequences. RESULTS: Y-specific fragments were identified in 19 of 24 (79.2%) women after one complete amplification. A second amplification of these samples negative for Y-specific fragments revealed three additional samples positive for the Y chromosome-specific fragment. Only two male fetuses remained unidentified. Overall, 91.7% male fetuses and 96% of all fetuses (48/50) in these women were correctly identified. CONCLUSIONS: The primers described in this study provide an additional or alternative tool for the determination, by means of the polymerase chain reaction, of Y chromosome-bearing cells in maternal circulation.


Subject(s)
Polymerase Chain Reaction , Pregnancy/blood , Prenatal Diagnosis/methods , Sex Determination Analysis/methods , Y Chromosome , Base Sequence , Cytodiagnosis/methods , DNA Primers , Female , Humans , In Vitro Techniques , Male , Molecular Sequence Data
13.
Genomics ; 34(3): 430-2, 1996 Jun 15.
Article in English | MEDLINE | ID: mdl-8786147

ABSTRACT

We report the mapping of the human and mouse genes encoding SEK1 (SAPK/ERK kinase-1), a newly identified protein kinase that is a potent physiological activator of the stress-activated protein kinases. The human SERK1 gene was assigned to human chromosome 17 using genomic DNAs from human-rodent somatic cell hybrid lines. A specific human PCR product was observed solely in the somatic cell line containing human chromosome 17. The mouse Serk1 gene was mapped to chromosome 11, closely linked to D11Mit4, using genomic DNAs from a (C57BL/6J x Mus spretus)F1 x M. spretus backcross.


Subject(s)
Chromosome Mapping , Chromosomes, Human, Pair 17 , MAP Kinase Kinase 4 , Mitogen-Activated Protein Kinase Kinases , Protein Kinases/genetics , Alleles , Animals , Base Sequence , Conserved Sequence , Cricetinae , Crosses, Genetic , Genetic Linkage , Humans , Hybrid Cells , In Situ Hybridization, Fluorescence , Mice , Mice, Inbred C57BL , Muridae , Polymerase Chain Reaction , Protein Kinases/biosynthesis
14.
Wound Repair Regen ; 6(6): 543-54, 1998.
Article in English | MEDLINE | ID: mdl-9893174

ABSTRACT

Myogenesis is thought to be regulated by the MyoD family of regulatory genes, which includes MyoD, myogenin, MRF- 4/myf-6, and myf-5. In situ hybridization studies of vertebrate skeletal muscle development have shown the colocalization of the MyoD family of regulatory genes to specific stages of muscle development. Although many studies have analyzed the regulatory role of these genes during myogenesis, there have been few reports dealing with the activation of these myogenic regulatory genes by exogenous agents. We have previously shown that muscle morphogenetic protein induces myogenesis in clonal populations of avian pluripotent stem cells. The current study was designed to examine the ability of muscle morphogenetic protein to induce myogenesis in a clonal population derived from the established fibroblastic Swiss-3T3 cell line. Swiss-3T3 cells were cloned to generate separate cell populations, tested for pluripotency, propagated through 690 cell doublings, retested for pluripotency, treated with muscle morphogenetic protein, and examined for the induction of gene expression using probes for the transcription products of MyoD and myogenin. Muscle morphogenetic protein induced the expression of mRNAs for MyoD and myogenin, suggesting a role for this compound as an exogenous activator of myogenesis.


Subject(s)
Gene Expression Regulation, Developmental/physiology , Muscle Proteins/physiology , Muscle, Skeletal/physiology , Myogenic Regulatory Factors/physiology , 3T3 Cells/physiology , Animals , Cells, Cultured , Female , Fibroblasts/physiology , Male , Mice , Phenotype , Stem Cells/physiology
15.
Genomics ; 27(1): 20-6, 1995 May 01.
Article in English | MEDLINE | ID: mdl-7665171

ABSTRACT

We report the mapping of the human and mouse genes for transcription factor GATA-4, a newly identified member of DNA-binding proteins involved in lineage determination. The human GATA4 gene was assigned to the short arm of human chromosome 8 using genomic DNAs from human-rodent somatic cell hybrid lines. Southern blot analyses indicated the presence of a human-specific 7.6-kb fragment that was observed only in DNA from the hybrid cells containing human chromosome 8 or the proximal region of its short arm. The mouse Gata4 gene was mapped to chromosome 14, closely linked to Clu (clusterin), using genomic DNAs from a (C57BL/6J x Mus spretus)F1 x M. spretus backcross. This mapping assignment places the Gata4 gene in the vicinity of the mouse Ds (disorganization) locus, a dominant gain-of-function mutation affecting embryonic development. We speculate that Ds is caused by a mutation in the Gata4 gene, ectopic expression of GATA-4, or a mutation in another lineage determination gene closely linked to Gata4.


Subject(s)
Chromosome Mapping , Chromosomes, Human, Pair 8 , DNA-Binding Proteins/genetics , Genes , Mice/genetics , Transcription Factors/genetics , Abnormalities, Multiple/genetics , Animals , Crosses, Genetic , Embryonic and Fetal Development/genetics , Female , GATA4 Transcription Factor , Humans , Hybrid Cells , Hybridization, Genetic , Male , Mice, Inbred C57BL , Mice, Mutant Strains , Muridae/genetics , Species Specificity
16.
Mamm Genome ; 7(8): 593-7, 1996 Aug.
Article in English | MEDLINE | ID: mdl-8678980

ABSTRACT

A repetitive DNA sequence, MS2, was isolated from EcoRI-digested genomic DNA of the vole, Microtus subarvalis. The fragment was cloned and sequenced. Sequence analysis of this 1194-bp fragment revealed a 156-bp region demonstrating a 55% homology with the mouse B1 repeat. The remaining MS2 sequence shows no significant homology with other known GenBank sequences. The results of in situ hybridization of MS2 on vole metaphase chromosomes indicate the fragment is confined to heterochromatin blocks of the sex chromosomes in all but one species (M. arvalis). Distribution of MS2 sequences provides evidence for heterogeneity of the giant heterochromatin blocks of the XY Chromosomes (Chrs) in voles, for the unique cluster-like localization of MS2 within these blocks.


Subject(s)
Arvicolinae/genetics , Chromosome Mapping , Repetitive Sequences, Nucleic Acid , Amino Acid Sequence , Animals , Base Sequence , Chromosome Banding , Cloning, Molecular , Consensus Sequence , Deoxyribonuclease EcoRI , Female , Heterochromatin , In Situ Hybridization, Fluorescence , Karyotyping , Male , Mice , Molecular Sequence Data , Open Reading Frames , Restriction Mapping , Sequence Homology, Nucleic Acid , X Chromosome , Y Chromosome
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