Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 27
Filter
1.
Proc Natl Acad Sci U S A ; 116(39): 19743-19752, 2019 09 24.
Article in English | MEDLINE | ID: mdl-31501325

ABSTRACT

Despite an ever-increasing interest for the use of pectin-derived oligogalacturonides (OGs) as biological control agents in agriculture, very little information exists-mainly for technical reasons-on the nature and activity of the OGs that accumulate during pathogen infection. Here we developed a sensitive OG profiling method, which revealed unsuspected features of the OGs generated during infection of Arabidopsis thaliana with the fungus Botrytis cinerea Indeed, in contrast to previous reports, most OGs were acetyl- and methylesterified, and 80% of them were produced by fungal pectin lyases, not by polygalacturonases. Polygalacturonase products did not accumulate as larger size OGs but were converted into oxidized GalA dimers. Finally, the comparison of the OGs and transcriptomes of leaves infected with B. cinerea mutants with reduced pectinolytic activity but with decreased or increased virulence, respectively, identified candidate OG elicitors. In conclusion, OG analysis provides insights into the enzymatic arms race between plant and pathogen and facilitates the identification of defense elicitors.


Subject(s)
Arabidopsis/metabolism , Botrytis/pathogenicity , Hexuronic Acids/metabolism , Arabidopsis Proteins/metabolism , Botrytis/metabolism , Gene Expression Regulation, Plant/genetics , Pectins/metabolism , Plant Diseases/microbiology , Plant Leaves/metabolism , Polygalacturonase/metabolism , Signal Transduction
2.
Int J Mol Sci ; 23(8)2022 Apr 11.
Article in English | MEDLINE | ID: mdl-35457046

ABSTRACT

DspA/E is a type three effector injected by the pathogenic bacterium Erwinia amylovora inside plant cells. In non-host Arabidopsis thaliana, DspA/E inhibits seed germination, root growth, de novo protein synthesis and triggers localized cell death. To better understand the mechanisms involved, we performed EMS mutagenesis on a transgenic line, 13-1-2, containing an inducible dspA/E gene. We identified three suppressor mutants, two of which belonged to the same complementation group. Both were resistant to the toxic effects of DspA/E. Metabolome analysis showed that the 13-1-2 line was depleted in metabolites of the TCA cycle and accumulated metabolites associated with cell death and defense. TCA cycle and cell-death associated metabolite levels were respectively increased and reduced in both suppressor mutants compared to the 13-1-2 line. Whole genome sequencing indicated that both suppressor mutants displayed missense mutations in conserved residues of Glycolate oxidase 2 (GOX2), a photorespiratory enzyme that we confirmed to be localized in the peroxisome. Leaf GOX activity increased in leaves infected with E. amylovora in a DspA/E-dependent manner. Moreover, the gox2-2 KO mutant was more sensitive to E. amylovora infection and displayed reduced JA-signaling. Our results point to a role for glycolate oxidase in type II non-host resistance and to the importance of central metabolic functions in controlling growth/defense balance.


Subject(s)
Arabidopsis , Erwinia amylovora , Alcohol Oxidoreductases/metabolism , Arabidopsis/metabolism , Bacterial Proteins/metabolism , Erwinia amylovora/genetics , Plant Diseases/genetics , Plant Diseases/microbiology
3.
J Exp Bot ; 72(4): 1020-1033, 2021 02 24.
Article in English | MEDLINE | ID: mdl-33188434

ABSTRACT

Current environmental and climate changes are having a pronounced influence on the outcome of plant-pathogen interactions, further highlighting the fact that abiotic stresses strongly affect biotic interactions at various levels. For instance, physiological parameters such as plant architecture and tissue organization together with primary and specialized metabolism are affected by environmental constraints, and these combine to make an individual plant either a more or less suitable host for a given pathogen. In addition, abiotic stresses can affect the timely expression of plant defense and pathogen virulence. Indeed, several studies have shown that variations in temperature, and in water and mineral nutrient availability affect the expression of plant defense genes. The expression of virulence genes, known to be crucial for disease outbreak, is also affected by environmental conditions, potentially modifying existing pathosystems and paving the way for emerging pathogens. In this review, we summarize our current knowledge on the impact of abiotic stress on biotic interactions at the transcriptional level in both the plant and the pathogen side of the interaction. We also perform a metadata analysis of four different combinations of abiotic and biotic stresses, which identifies 197 common modulated genes with strong enrichment in Gene Ontology terms related to defense . We also describe the multistress-specific responses of selected defense-related genes.


Subject(s)
Gene Expression Regulation, Plant , Stress, Physiological , Gene Expression , Genes, Plant , Plant Diseases/genetics , Plants/genetics
4.
J Exp Bot ; 71(15): 4578-4590, 2020 07 25.
Article in English | MEDLINE | ID: mdl-31930315

ABSTRACT

Nitrogen (N) is an essential nutrient that plants require for the synthesis of amino acids, proteins, and many other important metabolites. Plant metabolism and growth are consequently dependent on the amount of N that is assimilated and distributed from source leaves to developing sinks, such as fruits and seeds. The environmental stresses enhanced by climate change deeply influence seed yield and seed composition, and may disturb N use efficiency (NUE) in pants. We aimed to investigate plant responses to extreme climates with regard to NUE, N remobilization efficiency, and seed composition. By studying a collection of Arabidopsis genotypes showing a range of C:N ratios in seeds, we investigated the impact of different post-flowering growth conditions (control, heat, drought, low nitrate availability, induced senescence, and induced plant defense) on seed yield, N allocation in organs, NUE, and N remobilization efficiency. We analysed how post-flowering stresses could change seed filling and showed that post-flowering stresses change both the range of N and C concentrations and the C:N stoichiometry in seeds. Using a new trait, called delta seed composition, we measured the deviation in C:N stoichiometry of each genotype and revealed the genetic determinism of the C:N stoichiometry. Altogether, the results indicate that extreme climate impacts NUE dramatically in plants and generates different bottlenecks in N fluxes during seed filling.


Subject(s)
Arabidopsis , Plant Leaves , Stress, Physiological , Arabidopsis/genetics , Nitrogen , Seeds
5.
J Exp Bot ; 70(4): 1349-1365, 2019 02 20.
Article in English | MEDLINE | ID: mdl-30715439

ABSTRACT

Small secreted peptides are important players in plant development and stress response. Using a targeted in silico approach, we identified a family of 14 Arabidopsis genes encoding precursors of serine-rich endogenous peptides (PROSCOOP). Transcriptomic analyses revealed that one member of this family, PROSCOOP12, is involved in processes linked to biotic and oxidative stress as well as root growth. Plants defective in this gene were less susceptible to Erwinia amylovora infection and showed an enhanced root growth phenotype. In PROSCOOP12 we identified a conserved motif potentially coding for a small secreted peptide. Exogenous application of synthetic SCOOP12 peptide induces various defense responses in Arabidopsis. Our findings show that SCOOP12 has numerous properties of phytocytokines, activates the phospholipid signaling pathway, regulates reactive oxygen species response, and is perceived in a BAK1 co-receptor-dependent manner.


Subject(s)
Arabidopsis Proteins/physiology , Arabidopsis/genetics , Gene Expression Regulation, Plant/immunology , Genes, Plant , Intercellular Signaling Peptides and Proteins/physiology , Multigene Family , Plant Roots/growth & development , Arabidopsis/growth & development , Arabidopsis/immunology , Arabidopsis Proteins/genetics , Intercellular Signaling Peptides and Proteins/genetics , Plant Roots/genetics , Signal Transduction
6.
Int J Mol Sci ; 19(11)2018 Oct 27.
Article in English | MEDLINE | ID: mdl-30373239

ABSTRACT

In their natural environment, plants are generally confronted with multiple co-occurring stresses. However, the interaction between stresses is not well known and transcriptomic data in response to combined stresses remain scarce. This study aims at characterizing the interaction between transcriptomic responses to biotic stress and nitrogen (N) limitation. Plants were grown in low or full N, infected or not with Erwinia amylovora (Ea) and plant gene expression was analyzed through microarray and qRT-PCR. Most Ea-responsive genes had the same profile (induced/repressed) in response to Ea in low and full N. In response to stress combination, one third of modulated transcripts responded in a manner that could not be deduced from their response to each individual stress. Many defense-related genes showed a prioritization of their response to biotic stress over their response to N limitation, which was also observed using Pseudomonas syringae as a second pathosystem. Our results indicate an interaction between transcriptomic responses to N and biotic stress. A small fraction of transcripts was prioritized between antagonistic responses, reflecting a preservation of the plant defense program under N limitation. Furthermore, this interaction also led to a complex and specific response in terms of metabolism and cellular homeostasis-associated genes.


Subject(s)
Arabidopsis/genetics , Gene Expression Regulation, Plant , Nitrogen/metabolism , Stress, Physiological , Arabidopsis/metabolism , Arabidopsis/microbiology , Erwinia amylovora/pathogenicity , Nitrogen/deficiency , Plant Immunity , Transcriptome
7.
J Exp Bot ; 65(19): 5643-56, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25080088

ABSTRACT

Nitrogen (N) is essential for life and is a major limiting factor of plant growth. Because soils frequently lack sufficient N, large quantities of inorganic N fertilizers are added to soils for crop production. However, nitrate, urea, and ammonium are a major source of global pollution, because much of the N that is not taken up by plants enters streams, groundwater, and lakes, where it affects algal production and causes an imbalance in aquatic food webs. Many agronomical data indicate that the higher use of N fertilizers during the green revolution had an impact on the incidence of crop diseases. In contrast, examples in which a decrease in N fertilization increases disease severity are also reported, indicating that there is a complex relationship linking N uptake and metabolism and the disease infection processes. Thus, although it is clear that N availability affects disease, the underlying mechanisms remain unclear. The aim of this review is to describe current knowledge of the mechanisms that link plant N status to the plant's response to pathogen infection and to the virulence and nutritional status of phytopathogens.


Subject(s)
Nitrogen/metabolism , Plant Diseases/immunology , Plant Pathology , Plants/metabolism , Disease Resistance , Environmental Pollution , Fertilizers , Metabolome , Nitrates/metabolism , Plants/immunology , Plants/microbiology , Soil/chemistry , Transcriptome , Urea/metabolism
8.
Mol Plant Microbe Interact ; 25(3): 421-30, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22316300

ABSTRACT

Erwinia amylovora causes fire blight in rosaceous plants. In nonhost Arabidopsis thaliana, E. amylovora triggers necrotic symptoms associated with transient bacterial multiplication, suggesting either that A. thaliana lacks a susceptibility factor or that it actively restricts E. amylovora growth. Inhibiting plant protein synthesis at the time of infection led to an increase in necrosis and bacterial multiplication and reduced callose deposition, indicating that A. thaliana requires active protein synthesis to restrict E. amylovora growth. Analysis of the callose synthase-deficient pmr4-1 mutant indicated that lack of callose deposition alone did not lead to increased sensitivity to E. amylovora. Transcriptome analysis revealed that approximately 20% of the genes induced following E. amylovora infection are related to defense and signaling. Analysis of mutants affected in NDR1 and EDS1, two main components of the defense-gene activation observed, revealed that E. amylovora multiplied ten times more in the eds1-2 mutant than in the wild type but not in the ndr1-1 mutant. Analysis of mutants affected in three WRKY transcription factors showing EDS1-dependent activation identified WRKY46 and WRKY54 as positive regulators and WRKY70 as a negative regulator of defense against E. amylovora. Altogether, we show that EDS1 is a positive regulator of nonhost resistance against E. amylovora in A. thaliana and hypothesize that it controls the production of several effective defenses against E. amylovora through the action of WRKY46 and WRKY54, while WRKY70 acts as a negative regulator.


Subject(s)
Arabidopsis Proteins/immunology , Arabidopsis/immunology , DNA-Binding Proteins/immunology , Erwinia amylovora/pathogenicity , Plant Diseases/immunology , Plant Immunity , Arabidopsis/drug effects , Arabidopsis/genetics , Arabidopsis/microbiology , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cycloheximide/pharmacology , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Erwinia amylovora/drug effects , Erwinia amylovora/growth & development , Erwinia amylovora/physiology , Gene Expression Profiling , Gene Expression Regulation, Plant/drug effects , Gene Expression Regulation, Plant/genetics , Glucans/metabolism , Mutation , Oligonucleotide Array Sequence Analysis , Plant Diseases/microbiology , Plant Leaves/microbiology , RNA, Plant/genetics , Transcriptome
9.
Mol Plant Microbe Interact ; 24(5): 577-84, 2011 May.
Article in English | MEDLINE | ID: mdl-21463207

ABSTRACT

Erwinia amylovora is responsible for fire blight of apple and pear trees. Its pathogenicity depends on a type III secretion system (T3SS) mediating the translocation of effectors into the plant cell. The DspA/E effector suppresses callose deposition on apple leaves. We found that E. amylovora and Pseudomonas syringae DC3000 tts mutants or peptide flg22 do not trigger callose deposition as strongly as the dspA/E mutant on apple leaves. This suggests that, on apple leaves, callose deposition is poorly elicited by pathogen-associated molecular patterns (PAMPs) such as flg22 or other PAMPs harbored by tts mutants and is mainly elicited by injected effectors or by the T3SS itself. Callose elicitation partly depends on HrpW because an hrpW-dspA/E mutant elicits lower callose deposition than a dspA/E mutant. Furthermore, an hrpN-dspA/E mutant does not trigger callose deposition, indicating that HrpN is required to trigger this plant defense reaction. We showed that HrpN plays a general role in the translocation process. Thus, the HrpN requirement for callose deposition may be explained by its role in translocation: HrpN could be involved in the translocation of other effectors inducing callose deposition. Furthermore, HrpN may also directly contribute to the elicitation process because we showed that purified HrpN induces callose deposition.


Subject(s)
Bacterial Outer Membrane Proteins/metabolism , Erwinia amylovora/metabolism , Glucans/metabolism , Malus/microbiology , Plant Diseases/microbiology , Bacterial Outer Membrane Proteins/isolation & purification , Bacterial Proteins/metabolism , Erwinia amylovora/pathogenicity , Malus/metabolism , Plant Leaves/metabolism , Plant Leaves/microbiology , Protein Transport , Pseudomonas syringae/metabolism , Pseudomonas syringae/pathogenicity
10.
Mol Plant Pathol ; 22(11): 1332-1346, 2021 11.
Article in English | MEDLINE | ID: mdl-34382308

ABSTRACT

We showed previously that nitrogen (N) limitation decreases Arabidopsis resistance to Erwinia amylovora (Ea). We show that decreased resistance to bacteria in low N is correlated with lower apoplastic reactive oxygen species (ROS) accumulation and lower jasmonic acid (JA) pathway expression. Consistently, pretreatment with methyl jasmonate (Me-JA) increased the resistance of plants grown under low N. In parallel, we show that in planta titres of a nonvirulent type III secretion system (T3SS)-deficient Ea mutant were lower than those of wildtype Ea in low N, as expected, but surprisingly not in high N. This lack of difference in high N was consistent with the low expression of the T3SS-encoding hrp virulence genes by wildtype Ea in plants grown in high N compared to plants grown in low N. This suggests that expressing its virulence factors in planta could be a major limiting factor for Ea in the nonhost Arabidopsis. To test this hypothesis, we preincubated Ea in an inducing medium that triggers expression of hrp genes in vitro, prior to inoculation. This preincubation strongly enhanced Ea titres in planta, independently of the plant N status, and was correlated to a significant repression of JA-dependent genes. Finally, we identify two clusters of metabolites associated with resistance or with susceptibility to Ea. Altogether, our data showed that high susceptibility of Arabidopsis to Ea, under low N or following preincubation in hrp-inducing medium, is correlated with high expression of the Ea hrp genes in planta and low expression of the JA signalling pathway, and is correlated with the accumulation of specific metabolites.


Subject(s)
Arabidopsis , Bacterial Proteins/genetics , Erwinia amylovora , Nitrates/metabolism , Arabidopsis/microbiology , Cyclopentanes/pharmacology , Erwinia amylovora/genetics , Erwinia amylovora/pathogenicity , Gene Expression Regulation, Bacterial , Oxylipins/pharmacology , Plant Diseases/microbiology , Virulence/genetics
11.
Commun Biol ; 4(1): 727, 2021 06 11.
Article in English | MEDLINE | ID: mdl-34117349

ABSTRACT

Lytic Polysaccharide Monooxygenases (LPMOs) are powerful redox enzymes able to oxidatively cleave recalcitrant polysaccharides. Widely conserved across biological kingdoms, LPMOs of the AA9 family are deployed by phytopathogens to deconstruct cellulose polymers. In response, plants have evolved sophisticated mechanisms to sense cell wall damage and thus self-triggering Damage Triggered Immunity responses. Here, we show that Arabidopsis plants exposed to LPMO products triggered the innate immunity ultimately leading to increased resistance to the necrotrophic fungus Botrytis cinerea. We demonstrated that plants undergo a deep transcriptional reprogramming upon elicitation with AA9 derived cellulose- or cello-oligosaccharides (AA9_COS). To decipher the specific effects of native and oxidized LPMO-generated AA9_COS, a pairwise comparison with cellobiose, the smallest non-oxidized unit constituting cellulose, is presented. Moreover, we identified two leucine-rich repeat receptor-like kinases, namely STRESS INDUCED FACTOR 2 and 4, playing a crucial role in signaling the AA9_COS-dependent responses such as camalexin production. Furthermore, increased levels of ethylene, jasmonic and salicylic acid hormones, along with deposition of callose in the cell wall was observed. Collectively, our data reveal that LPMOs might play a crucial role in plant-pathogen interactions.


Subject(s)
Arabidopsis/immunology , Botrytis/immunology , Cellulose/metabolism , Mixed Function Oxygenases/metabolism , Oligosaccharides/metabolism , Plant Diseases/immunology , Arabidopsis/metabolism , Arabidopsis/microbiology , Disease Resistance , Gene Expression Profiling , Gene Expression Regulation, Plant , Mixed Function Oxygenases/physiology , Oligosaccharides/physiology , Plant Diseases/microbiology , Sordariales/metabolism
12.
Mol Plant Pathol ; 21(11): 1436-1450, 2020 11.
Article in English | MEDLINE | ID: mdl-32939948

ABSTRACT

Plant nitrogen (N) fertilization is known to affect disease; however, the underlying mechanisms remain mostly unknown. We investigated the impact of N supply on the Arabidopsis thaliana-Botrytis cinerea interaction. A. thaliana plants grown in low nitrate were more tolerant to all wild-type B. cinerea strains tested. We determined leaf nitrate concentrations and showed that they had a limited impact on B. cinerea growth in vitro. For the first time, we performed a dual RNA-Seq of infected leaves of plants grown with different nitrate concentrations. Transcriptome analysis showed that plant and fungal transcriptomes were marginally affected by plant nitrate supply. Indeed, only a limited set of plant (182) and fungal (22) genes displayed expression profiles altered by nitrate supply. The expression of selected genes was confirmed by quantitative reverse transcription PCR at 6 hr postinfection (hpi) and analysed at a later time point (24 hpi). We selected three of the 22 B. cinerea genes identified for further analysis. B. cinerea mutants affected in these genes were less aggressive than the wild-type strain. We also showed that plants grown in ammonium were more tolerant to B. cinerea. Furthermore, expression of the selected B. cinerea genes in planta was altered when plants were grown with ammonium instead of nitrate, demonstrating an impact of the nature of N supplied to plants on the interaction. Identification of B. cinerea genes expressed differentially in planta according to plant N supply unveils two novel virulence functions required for full virulence in A. thaliana: a secondary metabolite (SM) and an acidic protease (AP).


Subject(s)
Ammonium Compounds/administration & dosage , Arabidopsis/microbiology , Botrytis/pathogenicity , Nitrates/administration & dosage , Nitrogen/administration & dosage , Plant Diseases/microbiology , Transcriptome , Arabidopsis/drug effects , Arabidopsis/genetics , Botrytis/genetics , Botrytis/growth & development , Gene Expression Profiling , Gene Expression Regulation, Plant , Host-Pathogen Interactions , Mutation , Plant Leaves/drug effects , Plant Leaves/genetics , Plant Leaves/microbiology , Virulence , Virulence Factors/genetics
13.
Mol Plant Pathol ; 19(2): 313-327, 2018 02.
Article in English | MEDLINE | ID: mdl-27925401

ABSTRACT

Soft-rot diseases of plants attributed to Dickeya dadantii result from lysis of the plant cell wall caused by pectic enzymes released by the bacterial cell by a type II secretion system (T2SS). Arabidopsis thaliana can express several lines of defence against this bacterium. We employed bacterial mutants with defective envelope structures or secreted proteins to examine early plant defence reactions. We focused on the production of AtrbohD-dependent reactive oxygen species (ROS), callose deposition and cell death as indicators of these reactions. We observed a significant reduction in ROS and callose formation with a bacterial mutant in which genes encoding five pectate lyases (Pels) were disrupted. Treatment of plant leaves with bacterial culture filtrates containing Pels resulted in ROS and callose production, and both reactions were dependent on a functional AtrbohD gene. ROS and callose were produced in response to treatment with a cellular fraction of a T2SS-negative mutant grown in a Pels-inducing medium. Finally, ROS and callose were produced in leaves treated with purified Pels that had also been shown to induce the expression of jasmonic acid-dependent defence genes. Pel catalytic activity is required for the induction of ROS accumulation. In contrast, cell death observed in leaves infected with the wild-type strain appeared to be independent of a functional AtrbohD gene. It was also independent of the bacterial production of pectic enzymes and the type III secretion system (T3SS). In conclusion, the work presented here shows that D. dadantii is recognized by the A. thaliana innate immune system through the action of pectic enzymes secreted by bacteria at the site of infection. This recognition leads to AtrbohD-dependent ROS and callose accumulation, but not cell death.


Subject(s)
Arabidopsis/immunology , Gammaproteobacteria/enzymology , Polysaccharide-Lyases/metabolism , Arabidopsis/metabolism , Arabidopsis/microbiology , Glucans/metabolism , Immunity, Innate/genetics , Immunity, Innate/physiology , Oligosaccharides/metabolism , Polysaccharide-Lyases/genetics , Reactive Oxygen Species/metabolism , Type III Secretion Systems/metabolism , Virulence/genetics , Virulence/physiology
14.
Mol Plant Microbe Interact ; 20(7): 794-805, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17601167

ABSTRACT

Many taxonomically diverse plant species are attacked by Erwinia chrysanthemi, a member of the causal agents of soft-rotting diseases. Symptom development is due to the collective action of pectin-degrading enzymes secreted by the bacterium through a type II secretion system (T2SS). Using Arabidopsis thaliana as a susceptible host, we show that plants respond to E. chrysanthemi 3937 by expressing cell-wall reactions, production of an oxidative burst, and activation of salicylic acid (SA) and jasmonic acid (JA) or ethylene (ET) signaling pathways. We found that the oxidative burst is mainly generated via the expression of the AtrbohD gene, constitutes a barrier of resistance to bacterial attack, and acts independently of the SA-mediated response. To determine the importance of T2SS-secreted proteins in elicitation of these defenses, we used a T2SS deficient mutant and purified enzymatic preparations of representative members of strain 3937 pectate lyase activity. The T2SS-secreted proteins were responsible only partially for the activation of SA and JA or ET signaling pathways observed after infection with the wild-type bacterium and were not involved in the expression of other identified defense reactions. Our study shows the differential role played by pectate lyases isoenzymes in this process and highlights the complexity of the host immune network, which is finely controlled by the bacterium.


Subject(s)
Arabidopsis/microbiology , Cell Wall/metabolism , Dickeya chrysanthemi/growth & development , Plant Leaves/metabolism , Arabidopsis/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Cell Wall/ultrastructure , Cyclopentanes/metabolism , Dickeya chrysanthemi/genetics , Dickeya chrysanthemi/ultrastructure , Ethylenes/metabolism , Gene Expression Regulation, Bacterial , Glucans/metabolism , Isoenzymes/genetics , Isoenzymes/metabolism , Microscopy, Electron, Transmission , Mutation , Oxylipins , Plant Leaves/microbiology , Plant Leaves/ultrastructure , Polysaccharide-Lyases/genetics , Polysaccharide-Lyases/metabolism , Reactive Oxygen Species/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Salicylic Acid/metabolism , Signal Transduction
15.
Curr Biol ; 13(10): 843-8, 2003 May 13.
Article in English | MEDLINE | ID: mdl-12747833

ABSTRACT

In animals, double-stranded short interfering RNA (siRNA) and single-stranded microRNA (miRNA) regulate gene expression by targeting homologous mRNA for cleavage or by interfering with their translation, respectively. siRNAs are processed from injected or transgene-derived, long, perfect double-stranded RNA (dsRNA), while miRNAs are processed from short, imperfect dsRNA precursors transcribed from endogenous intergenic regions. In plants, both siRNAs and miRNAs activate cleavage of homologous RNA targets, but little is known about the genes controlling their production or action. The SGS2/SDE1 protein contributes to produce transgene siRNA, while DCL1 and HEN1 contribute to endogenous miRNA accumulation. Here, we show that: i) SGS2, SGS3, AGO1, and HEN1 contribute to produce transgene siRNA involved in sense posttranscriptional gene silencing (S-PTGS); ii) HEN1, but not SGS2, SGS3, or AGO1, contributes to the accumulation of the endogenous miR171 miRNA and to the cleavage of Scarecrow target mRNA by miR171; iii) SGS2, SGS3, AGO1, and HEN1 contribute to resistance against cucumber mosaic virus, but not to siRNA and IR-PTGS triggered by hairpin transgenes directly producing perfect dsRNA; and iv) the actions of HEN1 in miRNA/development and siRNA/S-PTGS can be uncoupled by single-point mutations at different positions in the protein.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis Proteins/physiology , Arabidopsis/genetics , Gene Silencing , MicroRNAs/genetics , Plant Diseases/virology , RNA, Small Interfering/genetics , Transgenes , Arabidopsis Proteins/genetics , Cucumovirus/genetics , Genes, Plant , MicroRNAs/metabolism , Phenotype , Plant Leaves/genetics , Plants, Genetically Modified , RNA Processing, Post-Transcriptional , RNA, Messenger/chemistry , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA-Dependent RNA Polymerase/genetics , RNA-Dependent RNA Polymerase/metabolism
16.
Front Plant Sci ; 8: 394, 2017.
Article in English | MEDLINE | ID: mdl-28400777

ABSTRACT

Among the most devastating bacterial diseases of plants, soft rot provoked by Dickeya spp. cause crop yield losses on a large range of species with potato being the most economically important. The use of antibiotics being prohibited in most countries in the field, identifying tolerance genes is expected to be one of the most effective alternate disease control approaches. A prerequisite for the identification of tolerance genes is to develop robust disease quantification methods and to identify tolerant plant genotypes. In this work, we investigate the feasibility of the exploitation of Arabidopsis thaliana natural variation to find tolerant genotypes and to develop robust quantification methods. We compared different quantification methods that score either symptom development or bacterial populations in planta. An easy to set up and reliable bacterial quantification method based on qPCR amplification of bacterial DNA was validated. This study demonstrates that it is possible to conduct a robust phenotyping of soft rot disease, and that Arabidopsis natural accessions are a relevant source of tolerance genes.

17.
Mol Plant Pathol ; 18(4): 540-554, 2017 05.
Article in English | MEDLINE | ID: mdl-27085087

ABSTRACT

Disease has an effect on crop yields, causing significant losses. As the worldwide demand for agricultural products increases, there is a need to pursue the development of new methods to protect crops from disease. One mechanism of plant protection is through the activation of the plant immune system. By exogenous application, 'plant activator molecules' with elicitor properties can be used to activate the plant immune system. These defence-inducing molecules represent a powerful and often environmentally friendly tool to fight pathogens. We show that the secondary bile acid deoxycholic acid (DCA) induces defence in Arabidopsis and reduces the proliferation of two bacterial phytopathogens: Erwinia amylovora and Pseudomonas syringae pv. tomato. We describe the global defence response triggered by this new plant activator in Arabidopsis at the transcriptional level. Several induced genes were selected for further analysis by quantitative reverse transcription-polymerase chain reaction. We describe the kinetics of their induction and show that abiotic stress, such as moderate drought or nitrogen limitation, does not impede DCA induction of defence. Finally, we investigate the role in the activation of defence by this bile acid of the salicylic acid biosynthesis gene SID2, of the receptor-like kinase family genes WAK1-3 and of the NADPH oxidase-encoding RbohD gene. Altogether, we show that DCA constitutes a promising molecule for plant protection which can induce complementary lines of defence, such as callose deposition, reactive oxygen species accumulation and the jasmonic acid and salicylic acid signalling pathways.


Subject(s)
Arabidopsis/immunology , Arabidopsis/microbiology , Deoxycholic Acid/pharmacology , Plant Diseases/immunology , Plant Diseases/microbiology , Pseudomonas syringae/physiology , Arabidopsis/drug effects , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Droughts , Gene Expression Regulation, Plant/drug effects , Kinetics , Plant Diseases/genetics , Plant Leaves/drug effects , Plant Leaves/genetics , Plant Leaves/microbiology , Pseudomonas syringae/drug effects , Pseudomonas syringae/growth & development , Stress, Physiological/drug effects , Stress, Physiological/genetics , Transcriptome/drug effects , Transcriptome/genetics
18.
Front Plant Sci ; 7: 545, 2016.
Article in English | MEDLINE | ID: mdl-27200021

ABSTRACT

The bacterium Erwinia amylovora is responsible for the fire blight disease of Maleae, which provokes necrotic symptoms on aerial parts. The pathogenicity of this bacterium in hosts relies on its type three-secretion system (T3SS), a molecular syringe that allows the bacterium to inject effectors into the plant cell. E. amylovora-triggered disease in host plants is associated with the T3SS-dependent production of reactive oxygen species (ROS), although ROS are generally associated with resistance in other pathosystems. We showed previously that E. amylovora can multiply transiently in the non-host plant Arabidopsis thaliana and that a T3SS-dependent production of intracellular ROS occurs during this interaction. In the present work we characterize the localization and source of hydrogen peroxide accumulation following E. amylovora infection. Transmission electron microscope (TEM) analysis of infected tissues showed that hydrogen peroxide accumulation occurs in the cytosol, plastids, peroxisomes, and mitochondria as well as in the apoplast. Furthermore, TEM analysis showed that an E. amylovora dspA/E-deficient strain does not induce hydrogen peroxide accumulation in the apoplast. Consistently, a transgenic line expressing DspA/E accumulated ROS in the apoplast. The NADPH oxidase-deficient rbohD mutant showed a very strong reduction in hydrogen peroxide accumulation in response to E. amylovora inoculation. However, we did not find an increase in bacterial titers of E. amylovora in the rbohD mutant and the rbohD mutation did not suppress the toxicity of DspA/E when introgressed into a DspA/E-expressing transgenic line. Co-inoculation of E. amylovora with cycloheximide (CHX), which we found previously to suppress callose deposition and allow strong multiplication of E. amylovora in A. thaliana leaves, led to a strong reduction of apoplastic ROS accumulation but did not affect intracellular ROS. Our data strongly suggest that apoplastic ROS accumulation is one layer of the non-host defense response triggered by the type three effector (T3E) DspA/E, together with callose deposition.

19.
PLoS One ; 9(6): e99343, 2014.
Article in English | MEDLINE | ID: mdl-24914891

ABSTRACT

Eukaryotes have evolved complex defense pathways to combat invading pathogens. Here, we investigated the role of the Arabidopsis thaliana heterogeneous nuclear ribonucleoprotein (hnRNP-Q) LIF2 in the plant innate immune response. We show that LIF2 loss-of-function in A. thaliana leads to changes in the basal expression of the salicylic acid (SA)- and jasmonic acid (JA)- dependent defense marker genes PR1 and PDF1.2, respectively. Whereas the expression of genes involved in SA and JA biosynthesis and signaling was also affected in the lif2-1 mutant, no change in SA and JA hormonal contents was detected. In addition, the composition of glucosinolates, a class of defense-related secondary metabolites, was altered in the lif2-1 mutant in the absence of pathogen challenge. The lif2-1 mutant exhibited reduced susceptibility to the hemi-biotrophic pathogen Pseudomonas syringae and the necrotrophic ascomycete Botrytis cinerea. Furthermore, the lif2-1 sid2-2 double mutant was less susceptible than the wild type to P. syringae infection, suggesting that the lif2 response to pathogens was independent of SA accumulation. Together, our data suggest that lif2-1 exhibits a basal primed defense state, resulting from complex deregulation of gene expression, which leads to increased resistance to pathogens with various infection strategies. Therefore, LIF2 may function as a suppressor of cell-autonomous immunity. Similar to its human homolog, NSAP1/SYNCRIP, a trans-acting factor involved in both cellular processes and the viral life cycle, LIF2 may regulate the conflicting aspects of development and defense programs, suggesting that a conserved evolutionary trade-off between growth and defense pathways exists in eukaryotes.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/immunology , Heterogeneous-Nuclear Ribonucleoproteins/metabolism , Plant Immunity , RNA-Binding Proteins/metabolism , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis/microbiology , Arabidopsis Proteins/genetics , Botrytis , Cyclopentanes/metabolism , Gene Expression Regulation, Plant , Gene Ontology , Glucosinolates/metabolism , Heterogeneous-Nuclear Ribonucleoproteins/genetics , Models, Biological , Mutation/genetics , Oxylipins/metabolism , Plant Diseases/genetics , Plant Diseases/microbiology , Plant Immunity/genetics , Pseudomonas syringae/physiology , RNA-Binding Proteins/genetics , Salicylic Acid/metabolism , Signal Transduction/genetics , Stress, Physiological/genetics , Transcriptome/genetics
20.
Mol Plant Pathol ; 14(5): 506-17, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23634775

ABSTRACT

The type III effector DspA/E is an essential pathogenicity factor of the phytopathogenic bacterium Erwinia amylovora. We showed that DspA/E was required for transient bacterial growth in nonhost Arabidopsis thaliana leaves, as an E. amylovora dspA/E mutant was unable to grow. We expressed DspA/E in A. thaliana transgenic plants under the control of an oestradiol-inducible promoter, and found that DspA/E expressed in planta restored the growth of a dspA/E mutant. DspA/E expression in these transgenic plants led to the modulation by at least two-fold of the expression of 384 genes, mostly induced (324 genes). Both induced and repressed genes contained high proportions of defence genes. DspA/E expression ultimately resulted in plant cell death without requiring a functional salicylic acid signalling pathway. Analysis of A. thaliana transgenic seedlings expressing a green fluorescent protein (GFP):DspA/E fusion indicated that the fusion protein could only be detected in a few cells per seedling, suggesting the degradation or absence of accumulation of DspA/E in plant cells. Consistently, we found that DspA/E repressed plant protein synthesis when injected by E. amylovora or when expressed in transgenic plants. Thus, we conclude that DspA/E is toxic to A. thaliana: it promotes modifications, among which the repression of protein synthesis could be determinant in the facilitation of necrosis and bacterial growth.


Subject(s)
Arabidopsis/microbiology , Bacterial Proteins/metabolism , Erwinia amylovora/growth & development , Erwinia amylovora/metabolism , Microbial Viability , Arabidopsis/cytology , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cell Death , Cell Nucleolus/metabolism , Electrolytes/metabolism , Gene Expression Profiling , Gene Expression Regulation, Plant , Genes, Plant/genetics , Glucans/metabolism , Mutation/genetics , Oligonucleotide Array Sequence Analysis , Phenotype , Plant Diseases/genetics , Plant Diseases/microbiology , Plant Leaves/growth & development , Plant Leaves/microbiology , Plant Roots/growth & development , Plant Roots/microbiology , Plants, Genetically Modified , Protein Biosynthesis , Pseudomonas syringae/physiology , Salicylic Acid/metabolism
SELECTION OF CITATIONS
SEARCH DETAIL