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1.
J Chem Phys ; 141(1): 014708, 2014 Jul 07.
Article in English | MEDLINE | ID: mdl-25005304

ABSTRACT

The paper presents the results of ab initio study of the opportunities for tuning the band structure, magnetic and transport properties of zigzag graphene nanoribbon (8-ZGNR) on hexagonal boron nitride (h-BN(0001)) semiconductor heterostructure by transverse electric field (E(ext)). This study was performed within the framework of the density functional theory (DFT) using Grimme's (DFT-D2) scheme. We established the critical values of E(ext) for the 8-ZGNR/h-BN(0001) heterostructure, thereby providing for semiconductor-halfmetal transition in one of electron spin configurations. This study also showed that the degeneration in energy of the localized edge states is removed when E(ext) is applied. In ZGNR/h-BN (0001) heterostructure, value of the splitting energy was higher than one in ZGNRs without substrate. We determined the effect of low E(ext) applied to the 8-ZGNR/h-BN (0001) semiconductor heterostructure on the preserved local magnetic moment (LMM) (0.3µ(B)) of edge carbon atoms. The transport properties of the 8-ZGNR/h-BN(0001) semiconductor heterostructure can be controlled using E(ext). In particular, at a critical value of the positive potential, the electron mobility can increase to 7× 10(5) cm(2)/V s or remain at zero in the spin-up and spin-down electron subsystems, respectively. We established that magnetic moments (MMs), band gaps, and carrier mobility can be altered using E(ext). These abilities enable the use of 8-ZGNR/h-BN(0001) semiconductor heterostructure in spintronics.

2.
Public Health Action ; 13(3): 83-89, 2023 Sep 21.
Article in English | MEDLINE | ID: mdl-37736581

ABSTRACT

SETTING: TB infection (TBI) is diagnosed using the technique-dependent tuberculin skin test (TST) or costly, more accurate interferon-gamma release assays. The TST (⩾10 mm) threshold was indicated by previous research among household contacts in Vietnam, but routine implementation with a different tuberculin reagent showed unexpectedly low TST positivity. OBJECTIVE: TST (⩾5 mm and ⩾10 mm) results were compared to QuantiFERON™-TB Gold Plus (QFT) results in household contacts during community campaigns in 2020 and 2021. DESIGN: This was a cross-sectional multi-center implementation study. RESULTS: Among 1,330 household contacts in 2020, we found a TBI prevalence of 38.6% (QFT), similar to TST ⩾5 mm (37.4%) and higher than TST ⩾10 mm (13.1%). QFT+/TST+ was higher for TST ⩾5 mm (20.7%) than TST ⩾10 mm (9.4%). QFT was not discordant with TST ⩾5 mm (McNemar's test = 0.6, P = 0.5) but was discordant with TST ⩾10 mm (McNemar's test = 263.9, P < 0.01). Older age and Southern region increased odds for positive TST ⩾5 mm and QFT with weaker associations for TST ⩾10 mm. Agreement and discordance were similar in 2021 for 1,158 household contacts. CONCLUSION: Tuberculin reagents affect TST positivity rates. High TB burden countries should monitor reliability of TBI diagnosis, including tuberculin potency, cold chain, and TST technique to optimize eligibility for TB preventive treatment.


CONTEXTE: L'infection tuberculeuse (TBI) est diagnostiquée à l'aide du test cutané à la tuberculine (TST), qui dépend de la technique, ou de tests de libération de l'interféron-gamma, coûteux et plus précis. Des recherches antérieures ont indiqué que le TST (⩾10 mm) est généralement utilisé pour diagnostiquer la TB parmi les contacts familiaux au Vietnam ; la mise en œuvre de routine avec un réactif de tuberculine différent a montré une faible positivité inattendue du TST. OBJECTIF: Les résultats du TST (⩾5 mm et ⩾10 mm) ont été comparés aux résultats de QuantiFERON™-TB Gold Plus (QFT) chez les contacts familiaux au cours des campagnes communautaires de 2020 et 2021. MÉTHODE: Il s'agissait d'une étude transversale multicentrique de mise en œuvre. RÉSULTATS: Parmi 1 330 contacts familiaux en 2020, nous avons trouvé une prévalence de TBI de 38,6% (QFT), similaire au TST ⩾5 mm (37,4%) et plus élevée que le TST ⩾10 mm (13,1%). Le QFT+/TST+ était plus élevé pour le TST ⩾5 mm (20,7%) que pour le TST ⩾10 mm (9,4%). Le QFT n'était pas discordant avec le TST ≥5 mm (test de McNemar = 0,6 ; P = 0,5) mais était discordant avec le TST ⩾10 mm (test de McNemar = 263,9 ; P < 0,01). L'âge avancé et la région méridionale augmentaient les probabilités d'un TST positif ⩾5 mm et d'un QFT, avec des associations plus faibles pour un TST ⩾10 mm. La concordance et la discordance étaient similaires en 2021 pour 1 158 contacts familiaux. CONCLUSION: Les réactifs de tuberculine affectent les taux de positivité des TST. Les pays à forte charge de TB doivent surveiller la fiabilité du diagnostic de TBI, y compris la puissance de la tuberculine, la chaîne du froid et la technique du TST afin d'optimiser l'éligibilité au traitement préventif de la TB.

3.
Cancer Res ; 53(12): 2888-94, 1993 Jun 15.
Article in English | MEDLINE | ID: mdl-7916648

ABSTRACT

We applied a subtractive hybridization approach to isolate genes differentially expressed between mature kidney and Wilms' tumor. We constructed a complementary DNA library from a total mature kidney complementary DNA subtracted by an excess of mRNA from a Wilms' tumor, WAGR4, with a germline deletion of 11p13 and a somatic loss of alleles at 11p15. Six clones presenting a differential pattern of expression, positive with mRNA from the mature kidney and negative with mRNA from the Wilms' tumor WAGR4, were characterized. Among these clones were two as yet unknown expressed sequences (D11S877E and D15S109E) and four sequences from known genes: renal dipeptidase (DPEP1), alpha B-crystallin (CRYA2), uromodulin (UMOD), and plasma glutathione peroxidase (GPX2). The different patterns of expression of these genes in 11 Wilms' tumors, whether or not they are hereditary, reflect the well-documented pathogenetic heterogeneity for Wilms' tumors. We propose that these clones could be helpful for an improved histological characterization of Wilms' tumors.


Subject(s)
DNA, Neoplasm/isolation & purification , Kidney Neoplasms/genetics , Kidney/chemistry , Nucleic Acid Hybridization/methods , RNA, Messenger/isolation & purification , RNA, Neoplasm/isolation & purification , Wilms Tumor/genetics , Adult , Base Sequence , Chromosome Deletion , DNA, Neoplasm/metabolism , Down-Regulation , Fetus , Humans , Molecular Sequence Data , Polymerase Chain Reaction , Sequence Analysis, DNA
4.
Trop Biomed ; 33(3): 500-505, 2016 Sep 01.
Article in English | MEDLINE | ID: mdl-33579122

ABSTRACT

A study on the species composition and the level of infestation of cockroaches was carried out from April 2013 to October 2014 in three localities of Hanoi, Vietnam, namely the Lan Ong-Old Town, Linh Dam condominium and Tan Da Resort. Out of the 187 units of premises examined, 44.9% of units were infested with cockroaches. A total of 576 cockroaches were trapped, of which six species were identified: Periplaneta americana (L.) was the most dominant species (72.1%), followed by Blattella germanica (L.) (14.8%), Pycnoscelus surinamensis (L.) (7.3%), Periplaneta australasiae (Fabricius) (2.9%), Periplaneta fuliginosa (Serville) (1.9%) and Supella longipalpa (Fabricius) (1.0%). Infestation was the highest in Lan Ong (74.0%), followed by Linh Dam (40.5%) and Tan Da (25.9%). Cockroaches were abundantly found in warehouses (100%), electrical distribution room (56.3%), and kitchens (46.7%).

5.
Oncogene ; 7(12): 2529-34, 1992 Dec.
Article in English | MEDLINE | ID: mdl-1334251

ABSTRACT

The human locus (novH) corresponding to the nov protooncogene overexpressed in avian nephroblastoma has been identified and mapped on chromosome 8q24.1. Another locus sharing homology with novH and corresponding to the connective tissue growth factor (CTGF) gene has also been mapped on chromosome 6q23.1. The chromosomal assignment of nov and CTGF proximal to c-myc and c-myb respectively is of interest because chromosomal abnormalities involving these regions have been associated with different human tumors including Wilms'.


Subject(s)
Chromosome Mapping , Chromosomes, Human, Pair 8 , Immediate-Early Proteins , Intercellular Signaling Peptides and Proteins , Kidney Neoplasms/genetics , Proto-Oncogenes , Wilms Tumor/genetics , Animals , Chickens , Chromosome Banding , Connective Tissue Growth Factor , Cricetinae , Genes, myc , Growth Substances/genetics , Humans , Hybrid Cells , Karyotyping , Nephroblastoma Overexpressed Protein , Oncogenes , Proto-Oncogene Mas , Restriction Mapping
6.
Oncogene ; 6(4): 505-14, 1991 Apr.
Article in English | MEDLINE | ID: mdl-1840680

ABSTRACT

We have characterized a novel chicken c-myb exon whose sequences are specifically expressed in thymic cells. In situ hybridization experiments indicate that this thymus-specific coding exon is localized on a small chromosome, distinct from the large acrocentric chromosome 3 on which we recently mapped the bulk of 15 exons, common to the c-myb mRNA species expressed in hematopoietic cells of both B and T lineages. These observations indicate that intermolecular recombination is required for the tissue-specific expression of the c-myb proto-oncogene. We also show that these thymus-specific sequences are conserved in human DNA and lie on chromosome 17q25, whereas the human c-myb locus is localized on chromosome 6q22-23. Sequencing data obtained from genomic DNA and PCR analyses performed with c-myb mRNA species expressed in chicken thymic cells strongly suggest that a repeated decameric sequence plays a key role in the recombination process.


Subject(s)
Chickens/genetics , Proto-Oncogene Proteins/genetics , Recombination, Genetic , Animals , Base Sequence , Blotting, Southern , Chromosome Mapping , Chromosomes, Human, Pair 17 , Drosophila/genetics , Exons , Humans , Hybrid Cells , Mice , Molecular Sequence Data , Nucleic Acid Hybridization , Proto-Oncogene Mas , Proto-Oncogene Proteins c-myb , RNA, Messenger/analysis , Sequence Homology, Nucleic Acid , Thymus Gland/metabolism
7.
Environ Technol ; 36(23): 2991-9, 2015.
Article in English | MEDLINE | ID: mdl-26510614

ABSTRACT

This investigation studied the application of digester effluent from co-digestion of pig manure and spent mushroom substrate as a fertilizer for leaf mustard planting and as feed for Tilapia fish growing. The fish raising experiment was set up in 1 × 1 × 1 m hapa conditions (triplicate for each treatment) with the density of 10 individiual per hapa; the fish weight and length were measured every 10 days for 50 continuous days. The leaf mustard was planted in real conditions at farmer's garden with normal cultivation style, and the weight and length of the plant were measured four times during the growing period. The study result shows that the harvest yield of leaf mustard fertilized by the digester effluent was 5.4 times higher than that by an inorganic fertilizer (IF). In addition to its contribution to a higher yield, the digester effluent accelerated the flower formation and shortened cultivation duration. For Tilapia fish culture, the growing rate of fish in the treatments supplied with 50% digester effluent + 50% commercial food (CF) was not significantly different in comparison to the fish cultivation with 100% CF. The result strongly confirms that the digester effluent from a co-digestion biogas plant of pig dung and spent mushroom compost is possible to be used as an organic fertilizer well for not only vegetable planting but also fish culture.


Subject(s)
Agriculture/methods , Aquaculture/methods , Bioreactors , Mustard Plant/growth & development , Tilapia/growth & development , Agaricales , Animals , Fertilizers , Manure , Soil , Swine , Vietnam , Waste Products
8.
Int J Tuberc Lung Dis ; 3(6): 483-7, 1999 Jun.
Article in English | MEDLINE | ID: mdl-10383060

ABSTRACT

SETTING: Ho Chi Minh City, Vietnam. OBJECTIVE: To evaluate the impact of slide reading errors at peripheral level on case-finding and treatment decisions. DESIGN: Over a 6-month period in 1997, information on date, type of slide, results of other slides from the patient, and treatment status was collected for all slides from district TB centers detected as having reading errors during smear microscopy quality control re-readings. RESULTS: Reading errors were detected in 117 slides: 115 (98.3%) were incorrectly read as negative, and 75 (65.2%) of these errors occurred in case-finding slides. In the 75 falsely negative case-finding slides, re-reading resulted in initiation of treatment in 38 patients (50.7%). The remaining 37 (49.3%) had only one positive slide and were told to return for follow-up after 6 months; the two (5.4%) who did return were both diagnosed with active TB. Detection of errors in the 40 false-negative follow-up slides resulted in treatment changes in four patients (10%). CONCLUSIONS: Quality control plays a critical role in helping to ensure the timely diagnosis and treatment of new TB cases and appropriate management of patients currently on treatment. The usefulness of quality control could be enhanced by focusing greater efforts on case-finding slides initially read as negative.


Subject(s)
Microscopy/standards , Mycobacterium tuberculosis/isolation & purification , Sputum/microbiology , Tuberculosis, Pulmonary/diagnosis , Evaluation Studies as Topic , False Negative Reactions , Female , Humans , Male , Microscopy/methods , Prognosis , Quality Control , Sensitivity and Specificity , Tuberculosis, Pulmonary/therapy , Vietnam
9.
Int J Tuberc Lung Dis ; 3(1): 55-61, 1999 Jan.
Article in English | MEDLINE | ID: mdl-10094170

ABSTRACT

SETTING: Quality control of sputum smear microscopy, which is essential for ensuring correct tuberculosis (TB) diagnosis, is often performed through the unblinded rereading of all positive slides and a sample of negative slides. OBJECTIVE: To assess misclassification error introduced by knowledge of prior results. METHODS: The Southern Vietnam Regional TB Laboratory prepared three gold-standard sets of 750 slides: an unblinded set, an unblinded set in which 13% of negative slides were replaced by weakly positive slides purposefully mislabelled as negative, and a blinded set. Six provincial technicians who normally perform district quality control each reread 125 slides from each set. RESULTS: In the three sets only one negative slide was misread as positive. In the unblinded set (referent), 2.9% (9/311) positive slides were misread as negative, compared with 18.7% (57/305) in the blinded set (prevalence ratio [PR] = 6.5; 95% confidence interval [CI] 3.3-12.8; P < 0.001), and 11.3% (33/293) in the unblinded set with mislabelled slides (PR = 3.9; 95%CI 1.9-8.0; P < 0.001). CONCLUSIONS: False-negative error was more common than false-positive error. Knowledge of prior reading influences re-reading. Blinded re-reading of systematically selected slides would appear preferable, although this method requires high levels of proficiency among quality control technicians.


Subject(s)
Quality Control , Specimen Handling , Sputum/microbiology , False Negative Reactions , False Positive Reactions , Humans
10.
Can J Public Health ; 82(2): 120-6, 1991.
Article in English | MEDLINE | ID: mdl-2049703

ABSTRACT

We compared the underlying cause of cancer death listed on death certificates, to the registry diagnosis from the incident file in the Ontario Cancer Registry (OCR). For the 68,772 cancer deaths having both a registry diagnosis and a cancer cause of death, 79.3% agreed between the two sources at the third digit level of ICD-9; this rose to 85.8% when sites were aggregated into about 30-site groups (positive predictive value 85.8%, sensitivity 82.9%). The most common sites, accounting for greater than 80% of all cancer deaths, all had agreement rates above 80%. Sites of questionable reliability, comprising less than 10% of all cancer deaths, included liver and larynx, and most other ill-defined and unspecified sites. Recommendations to improve the quality of published cancer mortality statistics include combining colon and rectum, and the non-Hodgkin's lymphomas. Caution in the use and interpretation of statistics for cancers of the liver and larynx is suggested owing to poor reliability.


Subject(s)
Cause of Death , Neoplasms/mortality , Data Interpretation, Statistical , Female , Humans , Incidence , Male , Neoplasms/classification , Neoplasms/diagnosis , Neoplasms/epidemiology , Ontario/epidemiology , Retrospective Studies
11.
J Nutr Sci Vitaminol (Tokyo) ; 43(3): 369-75, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9268924

ABSTRACT

The purpose of this study was to investigate the effects of different degrees of alcohol ingestion on bone strength and mineral density. Three different groups of growing female rats were administered different doses of an alcohol-water solution for a period of 6 months. These three groups were divided into: 1) the control group, which was only given water; 2) the moderate group, which was given 5% ethanol solution for only 2 h per day; and 3) the excess group, which was given only 5% ethanol solution for 163 days. This ethanol consumption induced no detrimental effect on biochemical parameters including liver function. The moderate group showed significantly higher (p < 0.05) levels of proximal metaphysis as compared to the control group, while there was no difference between the excess group and the control group. Similarly, in comparison to the control group, the moderate group exhibited a significant increase (p < 0.001) in bone mechanical strength, while the excess group showed either the same or decreased bone stiffness. These results indicate that alcohol intake has both beneficial and hindering effects on the skeleton, depending on the concentration and frequency of ethanol intake.


Subject(s)
Bone and Bones/drug effects , Ethanol/administration & dosage , Absorptiometry, Photon , Animals , Bone Density , Bone and Bones/metabolism , Feeding Behavior , Female , Rats , Rats, Wistar
12.
J Nutr Sci Vitaminol (Tokyo) ; 47(2): 147-55, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11508706

ABSTRACT

In Vietnam, information about blood pressure, serum lipids and their factors is limited. To obtain some of this information, a cross sectional nutrition survey was carried out in an urban and rural area of Ho Chi Minh City with 217 participants aged 60-69 y (148 females and 69 males). Anthropometry and blood pressure were measured. For three consecutive weekdays, 24 h dietary recalls were performed. Single 24 h urine was collected for sodium and potassium analysis. A fasting blood sample was taken and biochemical parameters were measured. Results indicate a high percentage of hypertension in urban (female: 35.5%, male: 43.8%) and rural areas (female: 22.2%, male: 35.1%). Blood pressure was correlated with body mass index (BMI) and 24 h urinary sodium-to-potassium (Na/K) ratio. A high prevalence of serum total cholesterol (TC) above 220 mg/dL (female: 55.3%, male: 31.3%) and overweight (female: 34.2%, male: 25.0%) were observed in urban residents. By contrast, 5.6% and 24.3% of rural females and males respectively had TC below 150 mg/dL and both genders had the same prevalence of underweight (32.4%). TC was positively correlated with body weight, BMI, dietary protein and dietary lipids. Overweight might be a major risk factor for hypertension in our urban elderly. A high Na/K intake ratio might be a risk factor for hypertension in both areas. The high prevalence of elevated TC in the urban area might to be related to the high lipid intake, and the high prevalence of low TC in the rural area might to be related to the low lipid intake.


Subject(s)
Cholesterol/blood , Dietary Fats/administration & dosage , Hypertension/epidemiology , Nutrition Disorders/blood , Obesity/physiopathology , Aged , Aging/blood , Aging/physiology , Anthropometry , Blood Pressure , Cross-Sectional Studies , Female , Humans , Hypertension/etiology , Male , Mental Recall , Middle Aged , Nutrition Disorders/epidemiology , Nutrition Surveys , Obesity/blood , Obesity/epidemiology , Prevalence , Risk Factors , Rural Population , Urban Population , Vietnam/epidemiology
14.
Virology ; 350(2): 258-68, 2006 Jul 05.
Article in English | MEDLINE | ID: mdl-16713612

ABSTRACT

Highly pathogenic avian influenza virus H5N1 is endemic in poultry in East and Southeast Asia with disease outbreaks recently spreading to parts of central Asia, Europe and Africa. Continued interspecies transmission to humans has been reported in Vietnam, Thailand, Cambodia, Indonesia and China, causing pandemic concern. Here, we genetically characterize 82 H5N1 viruses isolated from poultry throughout Indonesia and Vietnam and 11 human isolates from southern Vietnam together with sequence data available in public databases to address questions relevant to virus introduction, endemicity and evolution. Phylogenetic analysis shows that all viruses from Indonesia form a distinct sublineage of H5N1 genotype Z viruses suggesting this outbreak likely originated from a single introduction that spread throughout the country during the past two years. Continued virus activities in Indonesia were attributed to transmission via poultry movement within the country rather than through repeated introductions by bird migration. Within Indonesia and Vietnam, H5N1 viruses have evolved over time into geographically distinct groups within each country. Molecular analysis of the H5N1 genotype Z genome shows that only the M2 and PB1-F2 genes were under positive selection, suggesting that these genes might be involved in adaptation of this virus to new hosts following interspecies transmission. At the amino acid level 12 residues were under positive selection in those genotype Z viruses, in the HA and PB1-F2 proteins. Some of these residues were more frequently observed in human isolates than in avian isolates and are related to viral antigenicity and receptor binding. Our study provides insight into the ongoing evolution of H5N1 influenza viruses that are transmitting in diverse avian species and at the interface between avian and human hosts.


Subject(s)
Influenza A Virus, H5N1 Subtype/physiology , Influenza A Virus, H5N1 Subtype/pathogenicity , Influenza in Birds/epidemiology , Influenza, Human/epidemiology , Animals , Asia, Southeastern , Birds , Disease Outbreaks , Humans , Indonesia , Influenza A Virus, H5N1 Subtype/classification , Influenza A Virus, H5N1 Subtype/genetics , Molecular Sequence Data , Phylogeny , Vietnam/epidemiology , Zoonoses
15.
Czas Stomatol ; 43(10): 600-3, 1990 Oct.
Article in Polish | MEDLINE | ID: mdl-2104303

ABSTRACT

The habit of applying black lacquer to teeth is widespread in Vietnam. Observations are reported on its effect on the incidence of dental caries and its usefulness in caries treatment.


Subject(s)
Cultural Characteristics , Dental Caries/epidemiology , Lacquer , Humans , Vietnam/epidemiology
16.
Asia Pac J Clin Nutr ; 10(3): 188-93, 2001.
Article in English | MEDLINE | ID: mdl-11708306

ABSTRACT

The dietary patterns of indigenous Fijians are changing rapidly. Dietary relationships in regard to the prevalence of diabetes are poorly studied in Fiji. A survey was conducted to show the relationship of dietary patterns and other lifestyle factors for the development of diabetes among urban indigenous women in Fiji. A sample of 200 Fijian women aged 30-39 who agreed to participate were interviewed by the use of semiquantitative food frequency, 3 day-24 h recall study. Physical activity and ceremonial dietary customs were also taken into consideration. Anthropometry included measurements of height, weight, waist and hip. Total percentage bodyfat measurements and glycosuria tests were also conducted. The results showed high rates of obesity manifested in high percentage bodyfat, high body mass index (BMI) and high waist and hip ratio (WHR). The mean 24 h dietary intake exhibited a moderate intake of protein, high intake of fat and a low intake of carbohydrate. The carbohydrate reduction was a result from the decline in consumption of traditional staples. Consumption of cereals and related products favored the high intake of butter and margarine and also encouraged the use of cooking oil in frying varieties of flour products. The daily intake of anti-oxidant vitamins of beta-carotene and vitamin E were low, however there was a high intake of vitamin C. The food frequency study revealed cassava, bread and sugar were consumed daily as the main carbohydrate foods. Fish and meat were the most frequently consumed protein foods. The main beverage was sweet tea with whole-cream milk. Butter, margarine, coconut cream, cheap lamb flaps and cooking oil provided the main sources of fat. Levels of physical activity included high sedentary lifestyles with a high rate of subjects being overweight and obese. Ceremonial dietary customs showed a high consumption of meat and fish. Fruits were rarely consumed. Glycosuria existed among the age group under study. The impact of dietary transition, coupled with dietary excesses and physical inactivity, seem to be potential risk factors of diabetes among the indigenous women in the urban area.


Subject(s)
Diabetes Mellitus/etiology , Diet/trends , Energy Intake , Feeding Behavior/ethnology , Obesity/complications , Adult , Anthropometry , Diabetes Mellitus/epidemiology , Diabetes Mellitus/ethnology , Exercise , Female , Fiji/epidemiology , Glycosuria , Humans , Interviews as Topic , Knowledge , Life Style , Mental Recall , Metabolic Syndrome , Prevalence , Risk Factors , Urban Population , Women's Health
17.
Hum Genet ; 96(1): 131-2, 1995 Jul.
Article in English | MEDLINE | ID: mdl-7607647

ABSTRACT

We describe here a new sequence variant occurring in the coding region of the neurofibromatosis (NF1) gene (exon 13). This exonic polymorphism can be directly investigated by simple restriction enzyme digestion of RT-PCR (reverse transcription-polymerase chain reaction) products, making it a powerful tool for examining allele-specific mRNA expression levels.


Subject(s)
Alleles , Exons/genetics , Neurofibromatosis 1/genetics , RNA, Messenger/genetics , Base Sequence , Humans , Molecular Sequence Data , Polymerase Chain Reaction , Polymorphism, Genetic , RNA, Neoplasm/genetics
18.
Ann Genet ; 38(1): 27-31, 1995.
Article in English | MEDLINE | ID: mdl-7625756

ABSTRACT

Human Cot1 DNA directly labeled with dUTP-fluorochromes (FITC, Rhodamin) and used as a probe, allowed rapid detection of one or a few human chromosomes in human-hamster hybrid cells by in situ hybridization (FISH). A hybrid cell line containing only a human acrocentric chromosome was isolated (CH35B2D). The DNA from this hybrid was used for PCR amplification with a single Alu (A33) primer. After agarose gel electrophoresis, a continuum of intense bands of between 400-700 bp was observed with A33-PCR products. No amplified product was visible with hamster DNA. FISH on normal human metaphases of biotinylated Alu-PCR products obtained with Alu A33 and compétition with human Cot1 DNA showed decoration, with high specificity for chromosome 15. It was identified after R banding obtained with PI or DAPI in an antifade adjusted to pH11 with NaOH. Under the applied conditions, the Alu (A33) products are expected to be useful for characterization, by specific decoration of chromosome 15 aberrations in pathological cells. CH35B2D could be employed for functional studies of genes located on chromosome 15.


Subject(s)
Cell Line , Chromosomes, Human, Pair 15 , DNA/genetics , Animals , Base Sequence , Cricetinae , Humans , Hybrid Cells , In Situ Hybridization, Fluorescence , Karyotyping , Molecular Sequence Data , Polymerase Chain Reaction
19.
Biosci Biotechnol Biochem ; 60(7): 1152-5, 1996 Jul.
Article in English | MEDLINE | ID: mdl-8782410

ABSTRACT

The mutagenicity and desmutagenicity of extracts of soybeans heated at 225 +/- 5 degrees C were investigated by the Ames test. The soybeans were refluxed in water, methanol, or diethylether for 2 h. The aqueous and methanol extracts (2-4 mg/plate) of the heated soybeans exhibited strong desmutagenic activity of 43-92% against heterocyclic amines (Trp-P-1. Glu-P-2, IQ, MeIQx. PhIP), while no mutagenicity was observed. The desmutagenicity of the heated soybean extracts remained even after denaturation by 0.1 N HCl in vitro and absorption by the rat small intestine. The desmutagenic mechanism for heated soybeans was evaluated, and it was verified that the soybean extract exhibited its desmutagenicity by blocking the mutagenicity of activated Trp-P-1, and not by inhibiting the S9 enzyme system.


Subject(s)
Antimutagenic Agents/pharmacology , Glycine max/chemistry , Mutagens/toxicity , Animals , Carbolines/antagonists & inhibitors , Carbolines/toxicity , In Vitro Techniques , Methanol , Mutagenicity Tests , Plant Extracts/pharmacology , Rats , Salmonella typhimurium/drug effects , Salmonella typhimurium/genetics , Water
20.
Biosci Biotechnol Biochem ; 63(7): 1181-6, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10478445

ABSTRACT

This study investigated the effects of Maillard reaction products (MRPs) on the oxidative cleavage and polymerization of BSA (bovine serum albumin) in an aqueous system. In L-ascorbic acid (AsA) and Cu(II) or Fe(III) reaction system, 50-60% of BSA was cleaved under physiological conditions (37 degrees C, pH 7.2). The oxidative cleavage induced by AsA-Cu(II) system was suppressed to the extent of 32-86% by model melanoidins or brown pigments from amino acids and foodstuffs. In the AsA-Fe(III) system, the oxidative cleavage was inhibited to the extent of 45-93% by melanoidins and brown pigments. However, this cleavage was promoted by amino acid Amadori rearrangement products and brown pigment from soy paste. Therefore, MRPs show both suppression and promotion activity on oxidative cleavage of BSA in the system of AsA and a transition metal. The quantity of Amadori rearrangement moiety (ARM) in melanoidins from Lysine and brown pigments molecules from foods was also measured. From these data, it was estimated that the suppression and/or promotion of oxidative cleavage of BSA did not only depend on the quantity of ARM, but also depended on the chemical structure of ARM in melanoidins or brown pigments.


Subject(s)
Ascorbic Acid/chemistry , Maillard Reaction , Metals/chemistry , Proteins/chemistry , Chromatography, High Pressure Liquid , Copper/chemistry , Electrophoresis, Polyacrylamide Gel , Iron/chemistry , Lysine/analogs & derivatives , Lysine/chemistry , Magnetic Resonance Spectroscopy , Oxidation-Reduction , Pigments, Biological/chemistry , Polymers/chemistry , Serum Albumin, Bovine/chemistry
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