Effect of pomegranate peel extract on shelf life of strawberries: computational chemistry approaches to assess antifungal mechanisms involved.

In Italy Botrytis cinerea represents the most significant disease in strawberry crops and causes major quality and quantity losses in postharvest storage. An alternative strategy to the synthetic fungicides in crop defence could be the use of bioactive compounds with high antifungal activity. This research regards the use of Punica granatum peel extract to extend the shelf life of strawberry and the proposal of a possible mechanism for its antifungal activity. In vitro and in vivo tests showed the ability of pomegranate peel extract to control strawberry gray mould. Fourier transform near infrared spectroscopy showed a high correlation between spectra and disease severity then, a putative molecular mechanism for the interaction of punicalagin on ergosterol of fungal membrane was described by means of computational chemistry approaches. Molecular dynamics simulations were performed by using Gromacs to gain multiconformational representations of either punicalagin and an antifungal compound of clinical relevance, i.e. amphotericin B. The use of grid-based procedures, allowed to shed some light on the molecular mechanism featuring the antifungal activity of punicalagin.

Radiationless decay in the region of the 2t2g and 4eg resonances in SF6.

The S 2p Auger spectrum of SF(6) has been studied in the region of the 2t(2g) and 4e(g) resonances. The partial Auger spectra due to the ionization of the 2p spin-orbit components and of a shake-up satellite state have been measured selectively by tuning the photon energy and using the Auger electron-photoelectron coincidence technique. A detailed analysis of the Auger spectrum has also been performed using the Green's function-based second-order algebraic diagrammatic construction method.

Molecular photoionization cross sections by Stieltjes-Chebyshev moment theory applied to Lanczos pseudospectra.

Stieltjes imaging technique is widely used for the ab initio computation of photoionization cross sections and decay widths. The main problem hampering the application of the standard Stieltjes imaging algorithms in conjunction with high-level ab initio methods to polyatomic molecules is the requirement of full diagonalization of excessively large Hamiltonian matrices. Here we show that the full diagonalization bottleneck can be overcome by applying the Stieltjes imaging procedure to Lanczos pseudospectrum of the atomic or molecular Hamiltonian. Using the helium and neon atoms as examples, we demonstrate that the Lanczos pseudospectrum obtained after only a relatively small number of iterations can be used for Stieltjes-type calculations of photoionization cross sections essentially without loss of accuracy. The new technique is applied to the calculation of the total photoionization cross section of benzene within an ab initio approach explicitly taking into account single and double electronic excitations. Good agreement with experimental results is obtained.

A photoelectron and double photoionization study of the valence electronic structure of 1,4-bromofluorobenzene.

Conventional photoelectron and time-of-flight photoelectron-photoelectron coincidence (TOF-PEPECO) spectra have been measured for the outer valence region of the 1,4-bromofluorobenzene molecule. The photoelectron spectra were recorded using HeI alpha radiation from a resonance source, and the TOF-PEPECO spectra were recorded using HeII alpha radiation from a pulsed resonance source. The former provide energies of the cationic states and the latter of the dicationic states. The spectra are adequately interpreted with the aid of accurate Green's function calculations, showing very significant correlation effects. The lowest double ionization energy is found at 23.45 eV associated with the (4b(1))(-2)X (1)A(1) dicationic state.

The Auger spectroscopy of pyrimidine and halogen-substituted pyrimidines.

The C 1s and N 1s Auger spectra of pyrimidine, 2-chloropyrimidine, and 5-bromopyrimidine have been measured in an electron impact experiment at 1000 eV. In the case of the halogen-substituted pyrimidines, also the Cl 2p and Br 3d Auger spectra have been recorded. We have thoroughly analyzed and interpreted all the Auger spectra recorded here with the aid of accurate Green's function calculations with a large basis set. The spectra are extremely complex with thousands of states contributing and almost no single-state feature even near the double ionization threshold. Besides reproducing and explaining with great detail nearly all the main spectral features observed, the calculations have successfully unraveled the interplay among the different C 1s core hole chemical shifts in each molecule and how this affects some fingerprinting details in the composite C 1s Auger spectra.

Double photoionization of thiophene and bromine-substituted thiophenes.

We report the double photoionization spectra of thiophene, 3-bromothiophene, and 3,4-dibromothiophene using a coincidence spectroscopy technique based on electron time-of-flight measurements. Spectra have been recorded between the onset and 40.814 eV using He IIalpha radiation. The He I photoelectron spectrum of 3,4-dibromothiophene has also been measured. All the spectra have been analyzed and interpreted in detail on the basis of theoretical simulations from accurate Green's function calculations.

An experimental and theoretical study of double photoionization of CF4 using time-of-flight photoelectron-photoelectron (photoion-photoion) coincidence spectroscopy.

Single photon double ionization of CF4 has been studied by means of a time-of-flight photoelectron-photoelectron coincidence technique, which has very recently been extended towards ion detection, with energy analysis for the electrons and mass analysis for the ions. The complete single photon double ionization electron spectrum of CF4 up to a binding energy of approximately 51 eV is presented and discussed, also with the aid of accurate ab initio Green's function calculations. From ion detection in coincidence with the ejected electrons, we derive fragmentation pathway-selected double ionization electron spectra of CF4. From the same data we extract the yield of each doubly charged ion or ion pair as a function of the double ionization energy.

Effects of nuclear dynamics in the low-kinetic-energy Auger spectra of CO and CO2.

The CO and CO(2) carbon and oxygen Auger spectra have been measured by electron impact and compared with accurate theoretical calculations accounting for the effects of the dynamics of the nuclei on the energy and linewidth of the Auger bands. The calculations for CO were previously published [L. S. Cederbaum et al., J. Chem. Phys. 95, 6634 (1991)], while for CO(2) they are new and presented here for the first time. For both molecules, particular attention has been paid to the low-kinetic-energy region of the spectra, which corresponds to doubly charged ion states with the two holes mainly localized in the inner valence region. New bands have been observed. It is shown that a proper consideration of the vibrational broadening and shift of the bands due to the dynamics of the nuclei is needed to assign these features. For CO, very large energy shifts between corresponding features in the C 1s and O 1s spectra have been observed, confirming the theoretical predictions of 1991. The new computed spectra of CO(2) allow a very accurate analysis of the experiments over the whole energy range.

Complete valence double photoionization of SF6.

Single photon double ionization of SF(6) has been investigated at the photon energies 38.71, 40.814, and 48.372 eV by using a recently developed time-of-flight photoelectron-photoelectron coincidence spectroscopy technique which gives complete two-dimensional e(-)-e(-) spectra. The first complete single photon double ionization electron spectrum of SF(6) up to a binding energy of approximately 48 eV is presented and accurately interpreted with the aid of Green's function ADC(2) calculations. Spectra which reflect either mainly direct or mainly indirect (via interatomic coulombic decay of F 2s holes) double ionization of SF(6) are extracted from the coincidence map and discussed. A previous, very low value for the onset of double ionization of SF(6) is found to energetically coincide with a peak structure related to secondary inelastic scattering events.