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1.
Postepy Dermatol Alergol ; 38(5): 866-872, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34849136

ABSTRACT

INTRODUCTION: Basal cell carcinoma (BCC) is the most common skin cancer in the Caucasian population. It is believed that infections caused by viruses from the genus betapapillomavirus (ß-HPV) might be associated with the risk of BCC, but the spread of data on the prevalence of the virus in biopsies is significant. AIM: To assess the presence and diversity of ß-HPV in skin samples taken from the tumour and a fragment of healthy skin from the patients with BCC, as well as checking the correlation of factors listed below and presence of ß-HPV infection in the studied patients. MATERIAL AND METHODS: The study was conducted on the skin biopsies from 73 patients with histopathologically confirmed BCC. The following data were collected from patients: sex, age, hair colour and tumour location. Using the polymerase chain reaction (PCR) test, the presence of ß-HPV infection was detected in the tested samples. PCR and reverse hybridization assay were also used to genotype 25 types of ß-HPV. RESULTS: A statistically significant correlation was found between the sex and BCC type, BCC type and tumour location, BCC type and exposure to UV radiation, as well as between the hair colour and tumour location. The correlation between the BCC type and the number of tumours and HPV types detected was also noted. CONCLUSIONS: Preliminary studies suggest that one of the risk factors for development of infiltrating lesions is the presence of a single HPV 93 infection, but further research is needed to confirm these assumptions.

2.
Int J Mol Sci ; 21(8)2020 Apr 11.
Article in English | MEDLINE | ID: mdl-32290479

ABSTRACT

Using Raman microscopy, we investigated epithelial cervical cells collected from 96 women with squamous cell carcinoma (SCC) or belonging to groups I, IIa, IIID-1 and IIID-2 according to Munich III classification (IIID-1 and IIID-2 corresponding to Bethesda LSIL and HSIL groups, respectively). All women were tested for human papillomavirus (HPV) infection using PCR. Subcellular resolution of Raman microscopy enabled to understand phenotypic differences in a heterogeneous population of cervical cells in the following groups: I/HPV-, IIa/HPV-, IIa/HPV-, LSIL/HPV-, LSIL/HPV+, HSIL/HPV-, HSIL/HPV+ and cancer cells (SCC/HPV+). We showed for the first time that the glycogen content in the cytoplasm decreased with the nucleus size of cervical cells in all studied groups apart from the cancer group. For the subpopulation of large-nucleus cells HPV infection resulted in considerable glycogen depletion compared to HPV negative cells in IIa, LSIL (for both statistical significance, ca. 45%) and HSIL (trend, 37%) groups. We hypothesize that accelerated glycogenolysis in large-nucleus cells may be associated with the increased protein metabolism for HPV positive cells. Our work underlines unique capabilities of Raman microscopy in single cell studies and demonstrate potential of Raman-based methods in HPV diagnostics.


Subject(s)
Glycogen/metabolism , Papillomavirus Infections/complications , Uterine Cervical Neoplasms/etiology , Uterine Cervical Neoplasms/metabolism , Carcinoma, Squamous Cell/etiology , Carcinoma, Squamous Cell/metabolism , Carcinoma, Squamous Cell/pathology , Cell Nucleus/metabolism , Cell Nucleus/pathology , Epithelial Cells/metabolism , Female , Glycogenolysis , Histocytochemistry/methods , Humans , Intracellular Space/metabolism , Mucous Membrane/metabolism , Mucous Membrane/virology , Nonlinear Optical Microscopy , Papillomavirus Infections/virology , Uterine Cervical Neoplasms/pathology
3.
Folia Biol (Krakow) ; 62(1): 73-8, 2014.
Article in English | MEDLINE | ID: mdl-24745152

ABSTRACT

One of the factors associated with an increased risk of HPV-related malignant transformation may be bacterial and/or viral infections. The aim of our study was to examine whether the presence of infectious agents commonly detected in the genitourinary tract such as herpesviruses (HSV, CMV), and ureaplasmas (Ureaplasma urealyticum, Ureaplasma parvum) may lead to alterations in the expression of the HPV-16 E6 oncogene. Quantitative RT-PCR analysis was used to assess the level of HPV-16 E6 mRNA expression in SiHa cells. The presence of HSV-1 or HSV-2 in SiHa cells caused a 1.5-fold increase in HPV-16 E6 mRNA expression as compared with non-inoculated SiHa cells. Ureaplasma urealyticum presence but not Ureaplasma parvum stimulated the expression of HPV-16 E6 resulting in a nearly five-fold (4.8) up-regulated E6 mRNA level in SiHa cells. Our study is the first to suggest that infection of Ureaplasma urealyticum in an urogenital tract could increase the risk of cervical cancer by overexpression of the HPV E6 oncogene.


Subject(s)
Gene Expression Regulation, Viral/physiology , Oncogene Proteins, Viral/metabolism , RNA, Messenger/metabolism , Repressor Proteins/metabolism , Cell Line , Cytomegalovirus , Glyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)/genetics , Glyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)/metabolism , Humans , Oncogene Proteins, Viral/genetics , RNA, Messenger/genetics , Repressor Proteins/genetics , Simplexvirus , Ureaplasma
4.
Contemp Oncol (Pozn) ; 16(1): 56-9, 2012.
Article in English | MEDLINE | ID: mdl-23788856

ABSTRACT

AIM OF THE STUDY: To present a case of a patient with cervical carcinoma in stage IIA who was diagnosed with pelvic bone sarcoma 28 years after radiotherapy. CASE PRESENTATION: A 37-year-old woman with IIA cervix cancer was treated with external beam irradiation and brachytherapy. The patient had undergone conventionally fractionated external beam irradiation using the "box" technique, with the total dose of 50 Gy and brachytherapy with radium applicators (intrauterine tube and fornix applicator) with the dose of 60 Gy calculated at point A. After treatment she was followed up for 2 years. Twenty-six years later, inoperable pelvic bone sarcoma was diagnosed within the irradiated field. The clinical course was aggressive and rapid progression during chemotherapy was observed. CONCLUSIONS: For patients receiving radiotherapy, long-term careful follow-up is mandatory due to second cancer risk. In the case of any suspicious symptoms, such patients need proper diagnosis to detect any disease as early as possible.

5.
Biochim Biophys Acta Rev Cancer ; 1877(1): 188646, 2022 01.
Article in English | MEDLINE | ID: mdl-34763025

ABSTRACT

Reinterpretation of the Wartburg effect leads to understanding aerobic glycolysis as a process that provides considerable amount of molecular precursors for the production of lipids, nucleotides and amino acids that are necessary for continuous growth and rapid proliferation characteristic for cancer cells. Human papilloma virus (HPV) is a number one cause of cervical carcinoma with 99% of the cervical cancer patients being HPV positive. This tight link between HPV and cancer raises the question if and how HPV impact cells to reprogram their metabolism? Focusing on early phase proteins E1, E2, E5, E6 and E7 we demonstrate that HPV activates plethora of metabolic pathways and directly influences enzymes of the glycolysis pathway to promote the Warburg effect by increasing glucose uptake, activating glycolysis and pentose phosphate pathway, increasing the level of lactate dehydrogenase A synthesis and inhibiting ß-oxidation. Our considerations lead to conclusion that HPV is substantially involved in metabolic cell reprogramming toward neoplastic phenotype and its metabolic activity is the fundamental reason of its oncogenicity.


Subject(s)
Oncogene Proteins, Viral , Papillomavirus Infections , Uterine Cervical Neoplasms , Female , Glycogen/metabolism , Humans , Lipid Metabolism , Oncogene Proteins, Viral/genetics , Oncogene Proteins, Viral/metabolism , Papillomaviridae , Papillomavirus E7 Proteins/genetics , Papillomavirus E7 Proteins/metabolism , Papillomavirus Infections/complications
6.
Med Sci Monit ; 17(8): CR432-441, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21804462

ABSTRACT

BACKGROUND: The natural history of cytomegalovirus (CMV) infection and disease in transplant recipients prompts researchers to look for other factors contributing to this infection. The ubiquity of lymphotropic herpesviruses (EBV, HHV-6, and HHV-7) and the possibility of their activation during immunosuppression may suggest their participation in progression of CMV infection in patients after hematopoietic stem cell transplantation (HSCT). MATERIAL/METHODS: The presence of CMV, EBV, HHV-6 and HHV-7 was confirmed through detection of viral DNA isolated from leukocytes. Allo-HSCT recipients (n=55) were examined repeatedly within the average period of 14±7.3 months post-transplant. RESULTS: CMV DNA was detected in 24% of samples, while EBV, HHV-6 and HHV-7 were detected in 20%, 15% and 14% of samples, respectively. Based on the presence of CMV infection at particular time-points (months) after transplantation, the recipients were divided into 3 groups: Group I (N=15) with persistent infection, Group II (N=20) with transient infection, and Group III (N=20) without CMV infection. In Group I, the mean CMV load was significantly higher than in Group II, and the clinical condition of Group I patients was poorer. All these patients manifested clinical symptoms, and all had episodes of GvHD. All Group I patients developed multiple infections; EBV in 80%, HHV-6 in 47% and HHV-7 in 87% of patients. In the remaining groups, with the exception of HHV-6 in group II, the frequency of infected patients was lower. In addition, CMV presence was often preceded by another herpesvirus. CONCLUSIONS: The results suggest that other herpesviruses, mainly HHV-7, could predispose CMV to cause chronic infection.


Subject(s)
Cytomegalovirus Infections/etiology , Cytomegalovirus Infections/virology , DNA, Viral/blood , Hematopoietic Stem Cell Transplantation/adverse effects , Herpesvirus 6, Human/genetics , Herpesvirus 7, Human/genetics , Adult , Female , Graft vs Host Disease , Herpesviridae Infections/etiology , Humans , Male , Viral Load , Young Adult
7.
Przegl Epidemiol ; 65(3): 409-13, 2011.
Article in Polish | MEDLINE | ID: mdl-22184940

ABSTRACT

Studies on cytomegalovirus (HCMV) infections more often draw attention to the differences in tropism, pathogenicity and virulence of the virus depending on its genotype. The aim of this study was to assess the individual gB genotypes which are encoded in UL55 region of HCMV genome in a population of newborns and infants from Southern Poland. Genotypic analysis was carried out on 53 children (16 newborns and 37 neonates) with confirmed HCMV infection. The children were tested several times. A total of 101 samples, mainly urine, less blood, swabs from the upper respiratory tract, in justified cases, the cerebrospinal fluid were used in our study. Both genotyping and quantitative assessment of HCMV were performed using real time-PCR (rt-PCR). For identification of four major gB genotypes in one reaction, a modification of multiplex rt-PCR was used. Studies confirmed the presence of all major genotypes: gB1, gB2, gB3 and gB4 in the examined groups of children. Only in one case, the genotype could not be determined, perhaps it belonged to subtypes outside the detectable majority ofgB genotypes. Genotype gB1 (63.5%) which was slightly more frequent in infants than in neonates, dominated in our studies. The other genotypes occurred at a rate: gB2 - 15.4%, gB3 - 21.2%, gB4 - 28.8%, respectively. Mixed infections, caused by two genotypes were found in 16 (31%) children, mainly in older infants. There were no statistically significant differences in viral load when comparing a group of newborns with infants and single vs. mixed infection, as well as individual genotypes. The observed differences in the proportional occurrence of different gB genotypes in the two study groups of children may suggest various preferences of particular HCMV genotypes in congenital and acquired infections. Moreover, by monitoring of HCMV infection and determination the genotypes in consecutive samples, it could be identified infection acquired during hospitalization in three children.


Subject(s)
Cytomegalovirus Infections/virology , Cytomegalovirus/genetics , Genetic Variation , Viral Envelope Proteins/genetics , Viral Proteins/genetics , Cytomegalovirus/isolation & purification , Cytomegalovirus Infections/diagnosis , Female , Humans , Infant , Infant, Newborn , Infectious Disease Transmission, Vertical , Male , Poland , Polymerase Chain Reaction , Viral Envelope Proteins/isolation & purification , Viral Proteins/isolation & purification
8.
Ginekol Pol ; 82(6): 441-5, 2011 Jun.
Article in Polish | MEDLINE | ID: mdl-21853934

ABSTRACT

UNLABELLED: Persistent high-risk HPV infection, especially HPV-16, is considered to be an important step in the process of cervical carcinogenesis. Integration of viral DNA into the host genome through the destruction of HPV E2 sequences, increases the expression of viral proteins E6 and E7 and their participation in the transformation of cervical cancer. OBJECTIVE: The aim of this study was to apply real-time PCR (RT-PCR) to assess the prevalence of integrated and episomal HPV-16 DNA and determine viral DNA load in women with cervical intraepithelial lesions and invasive cervical cancer MATERIAL AND METHODS: A total of 84 women infected with HPV-16, including 44 with LSIL, 7 with HSIL and 33 with invasive cervical cancer participated in the study Cervical specimens were collected using the cytobrush. The presence of a sequence of E2 and E6 HPV-16 and human gene RNasy P was detected by quantitative RT-PCR. The viral load presented as the form of the virus genome copy numbers per 1,000 cells. RESULTS: The integrated form of HPV-16 genome was found in 97% of women with cervical cancer. In women with LSIL and HSIL mixed form (simultaneous occurrence of an integrated and episomal form) of the viral genome (84% and 57%, respectively) prevailed. The frequency of the integrated HPV-16 DNA increased with progression of dysplastic lesions of the cervix (p<0.001). Statistically significant differences in average number of copies of the virus in women with LSIL and HSIL compared to patients with cancer (p<0.001) were observed. The highest viral load was detected in women demonstrating an integrated HPV-16 DNA. CONCLUSIONS: Quantitative analysis of the sequence of E2 and E6 HPV-16 tested by RT-PCR can be used to determine the degree of integration of the viral genome and quantitative evaluation of viral load in clinical material. It can also serve as an additional parameter defining risk of progression of transformation in the cervix.


Subject(s)
Carcinoma, Squamous Cell/virology , DNA-Binding Proteins/metabolism , Human papillomavirus 16/genetics , Oncogene Proteins, Viral/metabolism , Uterine Cervical Dysplasia/virology , Uterine Cervical Neoplasms/virology , Adult , Aged , Carcinoma, Squamous Cell/pathology , DNA, Viral/analysis , Female , Human papillomavirus 16/metabolism , Humans , Middle Aged , Papillomavirus Infections/pathology , Papillomavirus Infections/virology , Reverse Transcriptase Polymerase Chain Reaction , Uterine Cervical Neoplasms/pathology , Viral Load , Young Adult , Uterine Cervical Dysplasia/pathology
9.
Acta Biochim Pol ; 68(2): 341-346, 2021 Apr 28.
Article in English | MEDLINE | ID: mdl-33909391

ABSTRACT

The E1 and E2 genes of the human papillomavirus encode the so-called early proteins, their sequences are conserved, and regulatory functions are associated with the viral oncoproteins. The purpose of this study is to determine the HPV16 E1 and E2 mutations appearing in the female population of southern Poland, depending on the severity of cervical pathological changes. We also take into account the number of E1 and E2 mutations detected in the E6 gene variant (350G or 350T). This publication is one of the first in the Central and Eastern Europe to deal with this topic. We identified 4 mutations in the E1 gene and 24 mutations in the E2 gene that have not been described so far. In three cases of squamous cell carcinoma a C3409T mutation occurred, which is widely described as oncogenic. This mutation lies in the 3243-3539 area of the E2 hinge region. Statistical analyses show a possible relationship of mutations in this area with oncogenesis. The discovered dependencies may be important in the context of oncogenesis, however, a study with a larger group of patients is needed in order to confirm this view.


Subject(s)
Human papillomavirus 16/genetics , Oncogene Proteins, Viral/genetics , Papillomavirus Infections/virology , Uterine Cervical Neoplasms/virology , Adult , Carcinogenesis , Carcinoma, Squamous Cell/virology , DNA, Viral/genetics , Female , Human papillomavirus 16/classification , Humans , Middle Aged , Mutation , Poland , Polymorphism, Genetic , Squamous Intraepithelial Lesions/virology
10.
Cancers (Basel) ; 13(9)2021 Apr 21.
Article in English | MEDLINE | ID: mdl-33919178

ABSTRACT

Cellular lipid metabolism is significantly transformed during oncogenesis. To assess how dysplasia development influences lipid cellular metabolisms and what is the molecular background behind it, cervical epithelial cells of 63 patients assigned to seven groups (based on the cytological examination and HPVhr test results) were studied using a multimethodological approach including Raman microscopy and molecular methods. The consistent picture obtained studying the lipid content, cell inflammation, SREBF1 gene methylation (hence SREBP1 inhibition) and level of mitochondrial DNA copies (indirectly the number of mitochondria) showed that changes in lipid metabolism were multidirectional. Cells from patients classified as mildly dysplastic (LSIL) exhibited a unique behavior (the highest level of inflammation and SREBF1 methylation, the lowest lipid content and mitochondrial DNA). On the contrary, cells from severe dysplastic (HSIL) and cancer (SCC) groups showed the opposite characteristics including the lowest SREBF1 gene methylation as well as the highest level of mitochondrial DNA and lipid cellular concentration (for HSIL/HPVhr+ and SCC groups). Following dysplastic progression, the lipid content decreases significantly (compared to the control) for mildly abnormal cells, but then increases for HSIL/HPVhr+ and SCC groups. This intriguing dual switch in lipid metabolism (reflected also in other studied parameters) on the way from normal to squamous carcinoma cells is of potential diagnostic interest.

11.
Acta Biochim Pol ; 67(2): 189-195, 2020 Jun 08.
Article in English | MEDLINE | ID: mdl-32506870

ABSTRACT

Betapapillomaviruses have been linked to the development of nonmelanoma skin cancers. A great diversity of these viruses in skin specimens requires the use of sensitive and reliable detection methods. There are currently no standardized assays for diagnostic purposes. A combination of several molecular methods has great practical significance and gives the opportunity to broaden the spectrum of detected Beta-HPV types. In the present study, different molecular methods for Beta-HPVs detection and genotyping were used: PCRs with different sets of primers, PCR followed by reverse hybridization and direct sequencing of PCR amplimers; all performed in skin biopsies from lesions and perilesional healthy area of 118 patients with NMSC or precancerous lesions. Beta-HPVs were detected in 41% of 261 biopsies examined. The RHA for 25 types of Beta-HPVs showed a significantly higher sensitivity than PCR-based methods and allowed to detect 172 genotypes in 86 samples, including 39 with multiple infections. The most frequently identified types were HPV23, HPV24 and HPV93. HPV5 and HPV8, considered high-risk carcinogen types, were detected only in a small percentage of samples. Direct sequencing confirmed the presence of Beta-HPV genotypes from outside of RHA panel in the analysed biopsies. This allowed detecting thirty-two additional genotypes in 5 samples, that were positive only in RHA with the universal probe, which failed to identify the virus genotypes. Our findings confirmed the need to apply different methods to detect Beta-HPV infections.


Subject(s)
Betapapillomavirus/genetics , Papillomavirus Infections/diagnosis , Polymerase Chain Reaction/methods , Precancerous Conditions/diagnosis , Sequence Analysis, DNA/methods , Skin Neoplasms/diagnosis , Adult , Aged , Aged, 80 and over , Biopsy , DNA Primers , DNA, Viral/genetics , Female , Genotype , Humans , Male , Middle Aged , Papillomavirus Infections/pathology , Papillomavirus Infections/virology , Precancerous Conditions/pathology , Precancerous Conditions/virology , Sensitivity and Specificity , Skin/pathology , Skin Neoplasms/pathology
12.
Przegl Epidemiol ; 63(1): 97-101, 2009.
Article in Polish | MEDLINE | ID: mdl-19522235

ABSTRACT

Cervical carcinogenesis is a complex problem where papillomavirus is widely accepted as a causative agent. The correlation of CMV, EBV, HSV-1, HSV-2 with precancerous and cancer cervical lesions was investigated in 125 women with different diagnosis: LSIL- 44, HSIL- 12, cervical carcinoma-27 vs. 42 women without abnormality in cytology (control group). Cervical secretion samples were submitted for DNA extraction and determined by PCR and nPCR. HPV DNA genotyping was performed with the reverse hybridisation line probe assay. Among HPV-positive specimen,CMV was detected in 32% of samples, EBV in 14% and HSV-1 in 3%. The presence of CMV and EBV DNA was more frequent in cervical cancer specimen than in other study groups (p<0.001). The prevalence of EBV infection was increasing with the severity of cervical smear abnormality and was associated with HPV-16 (p=0.009). The risk for HPV-16 infection was 6.4 fold higher for CMV positive women (OR=6.44;95% CI 2.68-15.48; p=0.001) and 4.5 fold higher for EBV positive women (OR=4.58; 95% CI 1.45-14.46;p=0.009). HSV-1 and/or HSV-2 infections were detected rarely and only in the women with LSIL and in the control group. Our data suggest that EBV and/or CMV may be associated with HPV in cervical carcinogenesis.


Subject(s)
Cervix Uteri/virology , Herpesviridae/isolation & purification , Uterine Cervical Dysplasia/virology , Uterine Cervical Neoplasms/virology , Adult , Aged , Cell Transformation, Neoplastic , Cervix Uteri/pathology , DNA, Viral/analysis , Female , Herpesviridae/pathogenicity , Herpesvirus 1, Human/isolation & purification , Herpesvirus 2, Human/isolation & purification , Herpesvirus 4, Human/isolation & purification , Humans , Middle Aged , Polymerase Chain Reaction , Prognosis , Uterine Cervical Neoplasms/pathology , Vaginal Smears , Women's Health , Young Adult , Uterine Cervical Dysplasia/pathology
13.
Ginekol Pol ; 90(2): 104-108, 2019.
Article in English | MEDLINE | ID: mdl-30860278

ABSTRACT

In the world, there are many tests that allow the detection of HPV infection. These tests are based on different operating principles and have different levels of sensitivity. The first test to detect HPV infection was approved by the Food and Drug Administration in 2003. Since then, the FDA has approved five more commercial tests for this purpose, the last one in 2018. This paper discusses the principles of molecular tests to detect HPV, which have been approved by the FDA, the main differences between them, as well as their advantages and disadvantages.


Subject(s)
Molecular Diagnostic Techniques , Papillomaviridae , Papillomavirus Infections/diagnosis , Female , Humans , Papillomaviridae/genetics , Papillomaviridae/isolation & purification , United States , United States Food and Drug Administration , Uterine Cervical Neoplasms/prevention & control
14.
Acta Biochim Pol ; 55(4): 687-92, 2008.
Article in English | MEDLINE | ID: mdl-19015776

ABSTRACT

Human papillomavirus (HPV) is widely accepted as a causative agent of cervical cancer. The distribution and prevalence of HPV types depend on geographic region and demographic factors. The aim of this study was to investigate the relationship between the presence of various HPV types and the outcome of cytological examination. Cervical smears were obtained from 125 women from southern Poland: low grade squamous intraepithelial lesions (LSIL) - 44, high grade squamous intraepithelial lesions (HSIL) - 12, cervical carcinoma - 27 and 42 women without abnormality in cytology as a control group. DNA was extracted from the smears and broad-spectrum HPV DNA amplification and genotyping was performed with the SPF 10 primer set and reverse hybridisation line probe assay (INNO-LiPA HPV Genotyping, Innogenetics). HPV DNA was detected in approximately 72% cases, more frequently in women with squamous intraepithelial lesions and cervical carcinoma than in the control group (P < 0.0005). The most frequent type found was HPV 16 (37%), followed by HPV 51 (28%) and HPV 52 (17%). A single HPV type was detected in 51% positive cases, more frequently in cervical cancer specimens. Multiple HPV infection was dominant in women with LSIL and normal cytology. Prevalence of HPV 16 increased with the severity of cervical smear abnormality. For women HPV 16 positive, the relative risk (odds ratio) of the occurrence of HSIL and cervical cancer versus LSIL was 14.4 (95% CI, 3.0-69.2; P=0.001) and 49.4 (95% CI, 6.5-372.8; P < 0.001), respectively. Genotyping of HPV will allow better classification of women with cervical abnormalities into different risk groups and could be useful in therapy.


Subject(s)
Alphapapillomavirus/isolation & purification , Cervix Uteri/virology , Uterine Cervical Dysplasia/virology , Uterine Cervical Neoplasms/virology , Vaginal Smears , Adult , Aged , Alphapapillomavirus/genetics , Case-Control Studies , DNA, Viral/genetics , Female , Genotype , Humans , Middle Aged , Polymerase Chain Reaction
15.
Folia Biol (Krakow) ; 56(3-4): 269-71, 2008.
Article in English | MEDLINE | ID: mdl-19055056

ABSTRACT

Multiplex PCR with specific primers for E2/E6 genes was used to assess the viral integration status of HPV-16 in women with low and high grade squamous intraepithelial lesions (LSIL and HSIL, respectively) in comparison to cervical cancer patients. Women with confirmed HPV-16 infection were examined: 30 with LSIL, 12 with HSIL and 23 with cervical cancer. The PCR products were separated electrophoretically in agarose gels and densitometric analysis was performed using Bio-Rad Quantity One software. E2 and E6 sequences of HPV-16 were detected in 91% of the women. The free episomal viral genome was not detected in the cervical carcinoma group. Twenty six percent of the samples obtained from this group harboured the integrated form, whereas the remaining samples possessed a mixture, i.e. episomal and integrated forms of viral DNA. The free episomal form dominated in women with LSIL and HSIL. In 6 cases the episomal and integrated forms were detected simultaneously. HPV-16 integration occurred in a subset of LSILs and HSILs, not only in the cervical cancer patients and correlated with progression of cytological changes. The assessment of the status of HPV-16 may be the molecular factor preceding the morphological features leading to malignancy.


Subject(s)
Cervix Uteri/virology , DNA-Binding Proteins/genetics , Human papillomavirus 16/genetics , Oncogene Proteins, Viral/genetics , Papillomavirus Infections/virology , Repressor Proteins/genetics , Adult , Aged , Cervix Uteri/pathology , DNA Primers/genetics , Female , Humans , Middle Aged , Polymerase Chain Reaction
16.
Przegl Epidemiol ; 62(2): 447-52, 2008.
Article in Polish | MEDLINE | ID: mdl-18807493

ABSTRACT

The aim of the study was to estimate the incidence of Ureaplasma urealyticum (U.u.) and Ureaplasma parvum (Up.) in 168 women diagnosed with LSIL infected and not infected with HPV vs. 82 women with no cytological abnormalities in the cervix (control group). The material used in the study were cervical secretions samples. PCR was used to confirm the presence of HPV and to identify the species of ureaplasmas. U.p. was significantly more frequent in both groups of women. In the study group, ureaplasmas were more frequently isolated in the HPV infected (31%) vs. HPV negative (16%) women. No direct relationship was found between ureaplasmas and LSIL. Statistical analysis showed, that infection with HPV occurred more frequently in the presence of ureaplasmas (OR = 1.79; 95% PU 0.90-3.53; p = 0.093). The above relationship was most evident for U.u. The risk for HPV infection in that case was 6.5 fold higher. Infections with ureaplasmas, especially U.u should be considered as a factor increasing the risk of HPV infection of the cervical epithelial cells.


Subject(s)
Papillomaviridae/isolation & purification , Papillomavirus Infections/epidemiology , Precancerous Conditions/epidemiology , Ureaplasma Infections/epidemiology , Ureaplasma/isolation & purification , Uterine Cervical Dysplasia/epidemiology , Adult , Case-Control Studies , DNA, Bacterial/analysis , Female , Humans , Incidence , Middle Aged , Papillomavirus Infections/microbiology , Polymerase Chain Reaction/methods , Precancerous Conditions/microbiology , Risk Factors , Ureaplasma/classification , Ureaplasma Infections/microbiology , Ureaplasma urealyticum/isolation & purification , Uterine Cervical Dysplasia/microbiology , Vaginal Smears/methods
17.
J Cancer Res Clin Oncol ; 144(1): 63-73, 2018 Jan.
Article in English | MEDLINE | ID: mdl-29043437

ABSTRACT

PURPOSE: To evaluate the impact of HPV16 load (VL-the number of virus genome copies per cell) and P16 expression on prognosis of patients with squamous cell carcinomas (SCCs) of head and neck (HN). MATERIALS AND METHODS: HPV16 presence was assessed in the group of 109 patients with HNSCCs by quantitative polymerase chain reaction (qPCR). VL (assessed by qPCR) and P16 expression (evaluated by immunohistochemistry) were analysed only in the subgroup of HPV16-positive tumours. These features were correlated with 5-year overall survival (OS) and disease-free survival (DFS). RESULTS: HPV16 infection was found in 36 tumours (33.0%). Virus-positive patients had better OS and DFS than those without infection (P = 0.041 and 0.005). Among HPV16-positive HNSCCs, 18 (50.0%) had higher VL (median value > 6764.3 copies/cell) and 25 (73.5%) P16 over expression. The significant differences in OS and DFS (P = 0.008 and 0.004) were noticed according to VL, wherein 100% DFS was found for patients with higher VL. According to P16 expression, significant difference was found only for OS (P = 0.020). In multivariate analysis, VL (P = 0.045; HR = 2.795; CI 0.121-1.060) and the level of smoking (P = 0.023, HR = 2.253; CI 1.124-4.514) were independent factors affecting DFS of HPV16-positive patients. CONCLUSION: On the basis of viral load, it is possible to differentiate prognosis of patients with HPV16-positive HNSCCs. In this subgroup, viral load has stronger prognostic potential than P16 expression.


Subject(s)
Carcinoma, Squamous Cell/virology , Head and Neck Neoplasms/virology , Human papillomavirus 16/isolation & purification , Papillomavirus Infections/virology , Carcinoma, Squamous Cell/pathology , Cyclin-Dependent Kinase Inhibitor p16/biosynthesis , Cyclin-Dependent Kinase Inhibitor p16/genetics , Female , Gene Dosage , Genome, Viral , Head and Neck Neoplasms/pathology , Human papillomavirus 16/genetics , Human papillomavirus 16/metabolism , Humans , Immunohistochemistry , Male , Middle Aged , Papillomavirus Infections/pathology , Polymerase Chain Reaction , Prognosis , Squamous Cell Carcinoma of Head and Neck , Viral Load
18.
Acta Biochim Pol ; 64(1): 143-149, 2017.
Article in English | MEDLINE | ID: mdl-27801430

ABSTRACT

The aim of this study was to analyse the correlation between HPV16 E6 variants and the physical status of viral genome (integrated, mixed, episomal) among patients with cervical cancer (n=40) and low-grade squamous intraepithelial lesions - LSIL (n=40). The study was performed on 80 HPV16 positive samples. HPV16 E6 variants were identified using PCR and DNA sequencing. Nucleotide sequences of E6 were compared with the prototype sequence (EUR-350T). The physical state of HPV DNA was determined as the ratio of E2/E6 copy number per cell. Twelve different intratypic variants were identified as belonging to European (in 77 samples) and North-American 1 (in 3 samples) sublineages. The most prevalent non-synonymous variant was EUR-350G, which occurred with similar frequency in cervical cancer and LSIL. The frequencies of additional mutations in variants with EUR-350T or EUR-350G sequences differed significantly. For the first time, missense mutations G122A, C153T and G188A were discovered in EUR-350G variant. The integrated viral genome was predominant in women with cervical cancer. The EUR-350T prototype and EUR-350G without additional mutations variants were prevalent in cervical cancer samples with the HPV16 characterized by integrated DNA. In summary, European variants of HPV16 E6 dominated in both cancer and LSIL group. The presence of EUR-350G favoured the occurrence of additional nucleotide changes. We showed that nucleotide changes occur significantly more often in the mixed form of viral DNA and in LSIL group and that the variants without additional mutations may promote integration of HPV16 genome.


Subject(s)
Genome, Viral/genetics , Human papillomavirus 16/genetics , Oncogene Proteins, Viral/genetics , Polymorphism, Genetic , Repressor Proteins/genetics , Uterine Cervical Neoplasms/virology , Adult , Aged , Aged, 80 and over , DNA, Viral/genetics , Europe/epidemiology , Female , Humans , Middle Aged , Mutation/genetics , North America/epidemiology , Poland , Risk , Uterine Cervical Dysplasia/virology
19.
Acta Biochim Pol ; 53(3): 603-7, 2006.
Article in English | MEDLINE | ID: mdl-17019439

ABSTRACT

The purpose of this study was to compare hybrid capture assay with PCRs using different primers for the L1, E6-E7 regions for the detection of human papillomavirus (HPV) genome. One hundred twenty-five cervical smears with normal (n=42) and abnormal (n=83) cytology were investigated. Those at high-risk for HPV were studied by hybridization antibody capture assay and PCR with the pU-1M/pU-2R primers. Target DNA from the HPV L1 region was amplified by SPF10 primer set and home-PCR with MY09/MY11 primers. The presence of HPV DNA in cervical smears was detected by SPF10 (in 72% of cases), MY09/MY11 (58%), hybrid capture (55%) and pU-1M/pU-2R (39%). Results obtained with the SPF10 and MY09/MY11 consensus primer sets as well as hybrid capture and pU-1M/pU-2R specific for high-risk types differed significantly (chi2, P<0.0005). The correlation between assays with the use of SPF10 and MY09/MY11 was 86% and between hybrid capture and the pU-1M/pU2R technique--78%. In 49% of samples HPV DNA was detected by the four methods, whereas in 12% only by the SPF10 primers. The most sensitive technique was found to be PCR with the use of SPF10 primers, while the most specific--the MY09/11 PCR method. It seems that home-PCR with MY09/MY11 primers could be applied in screening tests.


Subject(s)
Cervix Uteri/virology , DNA, Viral/analysis , Papillomaviridae/isolation & purification , Papillomavirus Infections/virology , Vaginal Smears , Animals , Antibodies, Antinuclear , Cervix Uteri/cytology , DNA Primers , DNA Probes, HPV , Female , Genotype , Humans , Nucleic Acid Hybridization/methods , Papillomaviridae/genetics , Polymerase Chain Reaction/methods , RNA Probes , Sensitivity and Specificity
20.
Przegl Epidemiol ; 60(1): 87-92, 2006.
Article in Polish | MEDLINE | ID: mdl-16758744

ABSTRACT

OBJECTIVE: Assessment of frequency and clinical course of EBV infection in patients that underwent non-manipulated allo-HCT from matched-related donors. METHODS: Active EBV infection was confirmed based on the presence of anti-EA antibodies (ELISA) and/or viral DNA (nPCR) isolated from peripheral leukocytes. For positive DNA-isolations semi-quantitative analysis were done. Patients were examined repeatedly, the time of monitoring was approximately 6 +/- 5 months. RESULTS: Active EBV infection was confirmed in 27 among 56 examined allo-HCT recipients. Primary infection was detected in 5 patients, in the remaining patients it was probably the result of virus reactivation. In most cases EBV-load was approximately 200 copies per 1 million of leukocytes, 1 patient with lymphoproliferative disorder (PTLD) had 2 million copies. EBV infection was asymptomatic in most cases (17), in 7 cases aminotransferase levels were insignificantly increased, in 2--diarrhea was observed and in 4 patients GvHD was intensified. CONCLUSIONS: In recipients without risk of PTLD, permanent monitoring of the EBV-load has no clinical justification.


Subject(s)
Epstein-Barr Virus Infections/diagnosis , Epstein-Barr Virus Infections/virology , Hematopoietic Stem Cell Transplantation/adverse effects , Herpesvirus 4, Human/isolation & purification , Adult , DNA, Viral/blood , Enzyme-Linked Immunosorbent Assay , Epstein-Barr Virus Nuclear Antigens/isolation & purification , Female , Humans , Male , Middle Aged , Transplantation, Homologous , Viral Load
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