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1.
Article in English | MEDLINE | ID: mdl-38112976

ABSTRACT

Non-obstructive mesenteric ischemia (NOMI) is caused by reduced blood flow to the intestines without physical occlusion in the mesenteric artery. Previous reports show that drug overdose occasionally induces late-onset NOMI; however, in most cases, the reason for the delayed onset is unclear. Here, we present an autopsy case of late-onset NOMI that was induced by a drug overdose. An 80-year-old man was admitted to the intensive care unit because of severe hypotension after an overdose of antihypertensive drugs. He received vasopressor therapy and continuous hemodiafiltration dialysis; however, gastrointestinal decontamination was not performed. He began to recover but developed acute mesenteric ischemia on the evening of day 4 and died on day 5. Autopsy showed discontinuous submucosal bleeding from the duodenum to the colon; there was no thrombus in the mesenteric artery, which led to a diagnosis of NOMI. In the stomach, there was 250 mL of reddish-brown fluid with a muddy brown substance. Histologic examination revealed ischemic necrosis in the small intestine. Quantitative analysis of serum collected during hospitalization revealed that nifedipine and cilostazol levels had peaked on day 3 of hospitalization. The formulation of nifedipine was a controlled-release tablet, and the low water solubility of cilostazol may have caused the tablets to adhere and remain in the stomach. Therefore, the drugs had been released into the blood stream several days after hospitalization, leading to delayed-onset NOMI. In cases of overdose, it is crucial to consider the formulation and properties of the involved drugs when determining medical treatment.

2.
Bioorg Med Chem Lett ; 37: 127835, 2021 04 01.
Article in English | MEDLINE | ID: mdl-33556574

ABSTRACT

Fluorescent biosensors are indispensable tools for molecular imaging, detection, and drug screening. Conventionally, fluorescent biosensors were constructed by incorporating fluorophores into ligands. Here, to develop ligand-independent biosensors, we demonstrated biosensor selection from a fluorophore-modified peptide phage library. In this library, the peptides were designed to form α-helical structures, and one cysteine, the probe modification site, was located at the center of four randomized residues on the same face of the helix. By conjugation with 4-nitrobenzoxadiazole (NBD), we constructed an NBD-modified phage library. We conducted selection against galectin-3 (Gal-3), a galactose-specific lectin associated with various biological events such as tumor metastasis and insulin resistance. After biopanning, we obtained NBD-modified peptides that selectively bind to Gal-3 from the library. The fluorescence intensity of the hit biosensors increased with the concentration of Gal-3, and this fluorescent response was visually observed.


Subject(s)
Biosensing Techniques , Blood Proteins/antagonists & inhibitors , Fluorescent Dyes/pharmacology , Galectins/antagonists & inhibitors , Nitro Compounds/pharmacology , Oxadiazoles/pharmacology , Peptides/pharmacology , Blood Proteins/metabolism , Dose-Response Relationship, Drug , Fluorescent Dyes/chemical synthesis , Fluorescent Dyes/chemistry , Galectins/metabolism , Humans , Molecular Structure , Nitro Compounds/chemistry , Oxadiazoles/chemistry , Peptides/chemical synthesis , Peptides/chemistry , Structure-Activity Relationship
3.
Bioorg Med Chem ; 46: 116345, 2021 09 15.
Article in English | MEDLINE | ID: mdl-34416510

ABSTRACT

Self-assembling peptides are a type of molecule with promise as scaffold materials for cancer cell engineering. We have reported a short self-assembling peptide, (FFiK)2, that had a symmetric structure connected via a urea bond. In this study, we functionalized (FFiK)2 by conjugation with various bioactive sequences for the 3D culture of cancer cells. Four sequences, RGDS and PHSRN derived from fibronectin and AG73 and C16 derived from laminin, were selected as bioactive sequences to promote cell adhesion, proliferation or migration. (FFiK)2, and its derivatives could co-assemble into supramolecular nanofibers displaying bioactive sequences and form hydrogels. MCF-7 cells were encapsulated in functionalized peptide hydrogels without significant cytotoxicity. Encapsulated MCF-7 cells proliferated under 3D culture conditions. MCF-7 cells proliferated with spheroid formation in hydrogels that displayed RGDS or PHSRN sequences, which will be able to be applied to drug screening targeting cancer stem cells. On the other hand, since MCF-7 cells migrated in a 3D hydrogel that displayed AG73, we could construct the metastatic model of breast cancer cells, which is helpful for the elucidation of breast cancer cells and drug screening against cancer cells under metastatic state. Therefore, functionalized (FFiK)2 hydrogels with various bioactive sequences can be used to regulate cancer cell function for tumor engineering and drug screening.


Subject(s)
Antineoplastic Agents/pharmacology , Breast Neoplasms/drug therapy , Cell Culture Techniques , Hydrogels/pharmacology , Peptides/pharmacology , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/chemistry , Breast Neoplasms/pathology , Cell Proliferation/drug effects , Dose-Response Relationship, Drug , Drug Screening Assays, Antitumor , Female , Humans , Hydrogels/chemistry , MCF-7 Cells , Macromolecular Substances/chemical synthesis , Macromolecular Substances/chemistry , Macromolecular Substances/pharmacology , Molecular Structure , Peptides/chemical synthesis , Peptides/chemistry , Structure-Activity Relationship , Tumor Cells, Cultured
4.
Bioorg Med Chem Lett ; 30(23): 127605, 2020 12 01.
Article in English | MEDLINE | ID: mdl-33038548

ABSTRACT

Chemically modified peptide ligands were identified from α-helix peptide phage libraries with different types of staple linkers. The hDM2-protein was used as a representative target of protein-protein interactions to screen ligands for p53 binding sites in hDM2. Two types of staple linkers were used for the chemical modification of the peptide phage display libraries before affinity selection. The identified stapled peptides could bind to hDM2 competitively with the p53 peptide. The stapled peptide phage libraries developed in this study will improve the discovery of protein-protein interaction inhibitors through the synergistic effect of peptide units and staple linkers.


Subject(s)
Peptides, Cyclic/chemistry , Protein Multimerization/drug effects , Proto-Oncogene Proteins c-mdm2/antagonists & inhibitors , Amino Acid Sequence , Humans , Molecular Structure , Peptide Library , Peptides, Cyclic/metabolism , Protein Binding , Protein Conformation, alpha-Helical , Proto-Oncogene Proteins c-mdm2/metabolism , Tumor Suppressor Protein p53/metabolism
5.
Toxicol Mech Methods ; 30(2): 139-145, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31550965

ABSTRACT

A neuropsychiatric drug overdose impairs physiological function via central nervous system (CNS) depression. In drug-related deaths, only the drug concentration can currently provide information regarding CNS depression in victims. In this study, using a drug overdose model, we investigated the ability of neurotransmitters in the cerebrospinal fluid (CSF) to serve as biomarkers for CNS depression. Four groups of rats were orally administered diazepam (200 mg/kg) and/or phenobarbital (100 mg/kg) or vehicle. In a hot plate test performed to assess physiological impairment, drug-administered animals showed prolongation of the response latency. Serum drug concentrations were also sufficient to observe the effect of drug overdose. The levels of benzoyl-derivatized neurotransmitters were measured using liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis. Noradrenaline, adrenaline, serotonin, melatonin, phosphoethanolamine, and histamine levels in the CSF decreased as the response latencies in the hot plate test increased. These reduced CSF neurotransmitter levels may represent physiological dysfunction through CNS depression.


Subject(s)
Drug Overdose/cerebrospinal fluid , GABA Modulators/adverse effects , Neurotransmitter Agents/cerebrospinal fluid , Administration, Oral , Animals , Biomarkers/cerebrospinal fluid , Carboxymethylcellulose Sodium/administration & dosage , Carboxymethylcellulose Sodium/adverse effects , Chromatography, Liquid , Diazepam/administration & dosage , Diazepam/adverse effects , Disease Models, Animal , GABA Modulators/administration & dosage , Male , Phenobarbital/administration & dosage , Phenobarbital/adverse effects , Rats, Wistar , Tandem Mass Spectrometry
6.
Bioorg Med Chem ; 26(12): 3126-3132, 2018 07 23.
Article in English | MEDLINE | ID: mdl-29699909

ABSTRACT

We recently developed an amphiphilic peptide, E1Y9 (Ac-E-YEYKYEYKY-NH2), that self-assembles into nanofibers and forms a hydrogel in the presence of Ca2+ ion. Four E1Y9-derivatives (E1Y9-ALK, E1Y9-DGR, E1Y9-PRG and E1Y9-RGD) were designed as conjugates of E1Y9 with bioactive peptide sequences named as ALK (ALKRQGRTLYGF), DGR (DGRDSVAYG), PRG (PRGDSGYRGDS) and RGD (RGDS), respectively, and stimulated osteoblast cells growth as well as differentiation. In this study, E1Y9/E1Y9-derivative mixed hydrogels were constructed to serve as scaffolds for osteoblastic differentiation of MC3T3-E1 cells. E1Y9 and E1Y9-derivatives co-assembled into networked nanofibers and formed hydrogels in response to Ca2+ ion. The pre-osteoblast cell line MC3T3-E1 was cultured and differentiated on mixed hydrogels. An E1Y9/E1Y9-ALK mixed hydrogel exhibited the highest cell proliferation and differentiation activity among the peptide hydrogels. The peptide sequence ALK promoted expression of RUNX2 and osteopontin, a key transcription factor and bone tissue matrix protein, respectively, during the differentiation stage. During the later stage, localization of RUNX2 and osteopontin was regulated in the cytosol and extracellularly, respectively, indicating that the E1Y9/E1Y9-ALK mixed hydrogel controlled the differentiation of MC3T3-E1 cells. Thus, the E1Y9/E1Y9-ALK mixed hydrogel developed in this study showed potential for the culture and regulation of differentiation of osteoblast cells for bone regeneration.


Subject(s)
Hydrogels/chemistry , Peptides/chemistry , Amino Acid Sequence , Animals , Calcium/metabolism , Cell Adhesion/drug effects , Cell Differentiation/drug effects , Cell Line , Cell Proliferation/drug effects , Core Binding Factor Alpha 1 Subunit/metabolism , Mice , Osteoblasts/cytology , Osteoblasts/metabolism , Osteopontin/metabolism , Peptides/chemical synthesis , Peptides/pharmacology
7.
Biopolymers ; 106(4): 476-83, 2016 Nov 04.
Article in English | MEDLINE | ID: mdl-26501895

ABSTRACT

We recently developed a self-assembling peptide, E1Y9, that self-assembles into nanofibers and forms a hydrogel in the presence of Ca(2+) . E1Y9 derivatives conjugated with functional peptide sequences derived from extracellular matrices (ECMs) reportedly self-assemble into peptide nanofibers that enhance cell adhesion and differentiation. In this study, E1Y9/E1Y9-IKVAV-mixed hydrogels were constructed to serve as artificial ECMs that promote cell differentiation. E1Y9 and E1Y9-IKVAV co-assembled into networked nanofibers, and hydrogels with disk and string shapes were formed in response to Ca(2+) treatment. The neuronal differentiation of PC12 cells was facilitated on hydrogels of both shapes that contained the IKVAV motifs. Moreover, long neurites extended along the long axis of the string-shaped gel, suggesting that the structure of hydrogels of this shape can affect cellular orientation. Thus, E1Y9 hydrogels can potentially be used as artificial ECMs with desirable bioactivities and shapes that could be useful in tissue engineering applications. © 2015 Wiley Periodicals, Inc. Biopolymers (Pept Sci) 106: 476-483, 2016.


Subject(s)
Cell Differentiation/drug effects , Hydrogels , Nanofibers/chemistry , Neurons/metabolism , Peptides , Animals , Hydrogels/chemistry , Hydrogels/pharmacology , PC12 Cells , Peptides/chemistry , Peptides/pharmacology , Rats
8.
Org Biomol Chem ; 12(26): 4673-81, 2014 Jul 14.
Article in English | MEDLINE | ID: mdl-24867193

ABSTRACT

Cell-penetrating peptides (CPPs) are able to be taken up by cells and can deliver macromolecular cargos. However, the mechanism of this internalization is not yet fully understood. Recent theories suggest that the binding of cationic CPPs to negatively charged extracellular glycosaminoglycans, such as heparan sulfate (HS), is a possible mechanism of cellular uptake (CU). Our group has screened the CU activities of 54 systematically designed amphiphilic α-helical peptides in HeLa cells. Notably, a mutation in even a single residue significantly alters the CU ability of a peptide. To determine the structure-CU activity relationship of CPPs, four peptides, which contain a difference in one or two amino acids (i.e., Arg/Glu and Ala/Phe), were chosen from our CPP library to examine their interactions with HS. Fluorescence spectroscopy, isothermal titration calorimetry (ITC) and dynamic light scattering analysis indicated that the HS-binding affinities and HS-clustering abilities of the four CPPs correlated well with their CU activities in HeLa and A549 cells. The heat capacities of the CPPs, determined using ITC and binding free energy decomposition analyses in molecular dynamics simulations, revealed that electrostatic interactions were more dominant in the HS-binding processes of Arg-containing peptides in comparison to Glu-containing peptides, whereas hydrophobic contributions were the primary mode of interaction of Phe-containing peptides in comparison to Ala-containing peptides. Furthermore, it was implied that hydrophobic interactions may be more favourable than electrostatic interactions during the CU process.


Subject(s)
Cell-Penetrating Peptides/chemistry , Cell-Penetrating Peptides/metabolism , Heparitin Sulfate/metabolism , Surface-Active Agents/chemistry , Surface-Active Agents/metabolism , Amino Acid Sequence , Amino Acids/chemistry , Calorimetry , Circular Dichroism , HeLa Cells , Heparitin Sulfate/chemistry , Humans , Kinetics , Least-Squares Analysis , Light , Molecular Dynamics Simulation , Molecular Sequence Data , Nonlinear Dynamics , Protein Structure, Secondary , Scattering, Radiation , Spectrometry, Fluorescence , Static Electricity , Thermodynamics
9.
Biopolymers ; 100(6): 731-7, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23893249

ABSTRACT

There is an increasing need for the development of functional artificial extracellular matrices (ECMs) for tissue engineering. Recently, we have successfully designed a self-assembling peptide, named E1Y9, to construct functional ECMs. We describe here an enhancement of abilities of E1Y9 materials to promote cell adhesion and differentiation, using functional peptide sequences derived from natural extracellular matrix proteins. We designed functionalized self-assembling peptides, RGDS-conjugated E1Y9 (E1Y9-RGDS) and IKVAV-conjugated E1Y9 (E1Y9-IKVAV). E1Y9-RGDS and E1Y9-IKVAV formed peptide nanofibers in a similar manner to E1Y9, with ß-sheet secondary structures. Surfaces coated with peptide nanofibers displayed the higher bioactivities of E1Y9-RGDS for cell adhesion and E1Y9-IKVAV for cell differentiation than those of E1Y9, with the activities being dependent on the concentrations of the functional peptides. These functionalized peptides will be useful for the construction of functional ECMs in cell and tissue engineering.


Subject(s)
Cell Adhesion , Nanofibers , Cell Differentiation , Nanofibers/chemistry , Peptides/chemistry , Tissue Engineering
10.
Bioorg Med Chem Lett ; 23(17): 4940-3, 2013 Sep 01.
Article in English | MEDLINE | ID: mdl-23871221

ABSTRACT

A monosaccharide-modified ß-loop peptide library displayed on phage has been constructed and used for the screening of glycopeptide ligands against a carbohydrate-binding protein. The ß-loop peptide library was designed and modified with a mannose derivative on phage. The glycopeptide ligands to concanavalin A (ConA), a mannose-binding protein, were obtained from the mannose-modified peptide phage library. The amino acids neighboring the mannose unit of glycopeptides not only reinforced the binding affinity but also gave diverse binding characteristics.


Subject(s)
Concanavalin A/metabolism , Glycopeptides/metabolism , Mannose/metabolism , Peptide Library , Amino Acid Sequence , Glycopeptides/chemistry , Mannose/chemistry , Models, Molecular , Molecular Sequence Data
11.
Forensic Sci Int ; 353: 111872, 2023 Dec.
Article in English | MEDLINE | ID: mdl-38775734

ABSTRACT

Analysis of volatile hydrocarbons in blood from fire-related deaths provides useful information such as whether the victim inhaled smoke from the fire before death or whether an accelerant was used in the fire. In this study, we used headspace gas chromatography-mass spectrometry to quantify volatile hydrocarbons in post-mortem heart blood from 121 fire victims. The cases were classified into the following four groups according to the detected volatile hydrocarbons: construction fires without accelerants, kerosene fires, gasoline fires, and a group with no fire-related hydrocarbons detected (other fires). We investigated the relationships between blood concentrations of carboxyhemoglobin (COHb) and volatile hydrocarbons, and between various volatile hydrocarbons. The mean COHb concentrations were higher in the construction fire group than in the kerosene and gasoline fire groups. In the construction fire group, there was a high correlation coefficient between the concentrations of benzene and COHb and relatively high coefficient correlations between the concentrations of benzene and toluene, benzene and xylene, toluene and styrene, and ethylbenzene and styrene. Our results indicate that the relationships between benzene, xylene, and toluene concentrations could be used to distinguish between deaths in construction fires, kerosene fires, and gasoline fires.


Subject(s)
Carboxyhemoglobin , Fires , Gas Chromatography-Mass Spectrometry , Hydrocarbons , Humans , Carboxyhemoglobin/analysis , Male , Female , Adult , Middle Aged , Aged , Kerosene , Young Adult , Aged, 80 and over , Adolescent , Gasoline , Volatile Organic Compounds/blood , Volatile Organic Compounds/analysis , Child
12.
Bioorg Med Chem Lett ; 22(22): 6825-7, 2012 Nov 15.
Article in English | MEDLINE | ID: mdl-23046965

ABSTRACT

Gold nanoparticles (GNPs) conjugated with monosaccharide-modified peptides have been developed as optical probes for lectin detection. Mannose-modified peptides were designed and conjugated with GNPs. The GNPs with mannose-modified peptide showed remarkable red shift of absorption maximum due to the aggregation with concanavalin A (ConA), a mannose-binding lectin. The aggregation activity of glycopeptide-modified GNPs with ConA depended on the amino acid sequence around the mannose unit of glycopeptides.


Subject(s)
Concanavalin A/analysis , Gold/chemistry , Mannose/chemistry , Metal Nanoparticles/chemistry , Peptides/chemistry , Spectrometry, Fluorescence
13.
Biochemistry ; 50(34): 7311-20, 2011 Aug 30.
Article in English | MEDLINE | ID: mdl-21797259

ABSTRACT

Antibiotic resistance is increasingly seen as a serious problem that threatens public health and erodes our capacity to effectively combat disease. So-called non-iron metalloporhyrins have shown promising antibacterial properties against a number of pathogenic bacteria including Staphylococcus aureus. However, little is known about the molecular mechanism(s) of action of these compounds and in particular how they reach the interior of the bacterial cells. A popular hypothesis indicates that non-iron metalloporphyrins infiltrate into bacterial cells like a "Trojan horse" using heme transport systems. Iron-regulated surface determinant (Isd) is the best characterized heme transport system of S. aureus. Herein we studied the molecular mechanism by which the extracellular heme-receptor IsdH-NEAT3 of Isd recognizes antimicrobial metalloporphyrins. We found that potent antibacterial porphyrins Ga(III)-protoporphyrin IX (PPIX) and Mn(III)-PPIX closely mimicked the properties of the natural ligand heme, namely (i) stable binding to IsdH-NEAT3 with comparable affinities for the receptor, (ii) nearly undistinghuishable three-dimensional structure when complexed with IsdH-NEAT3, and (iii) similar transfer properties to a second receptor IsdA. On the contrary, weaker antibacterial porphyrins Mg(II)-PPIX, Zn(II)-PPIX, and Cu(II)-PPIX were not captured effectively by IsdH-NEAT3 under our experimental conditions and displayed lower affinities. Moreover, reduction of Fe(III)-PPIX to Fe(II)-PPIX with dithionite abrogated stable binding to receptor. These data revealed a clear connection between oxidation state of metal and effective attachment to IsdH-NEAT3. Also, the strong correlation between binding affinity and reported antimicrobial potency suggested that the Isd system may be used by these antibacterial compounds to gain access to the interior of the cells. We hope these results will increase our understanding of Isd system of S. aureus and highlight its biomedical potential to deliver new and more efficient antibacterial treatments.


Subject(s)
Anti-Bacterial Agents/metabolism , Antigens, Bacterial/chemistry , Antigens, Bacterial/metabolism , Heme/metabolism , Metalloporphyrins/metabolism , Receptors, Cell Surface/chemistry , Receptors, Cell Surface/metabolism , Staphylococcus aureus/metabolism , Anti-Bacterial Agents/pharmacology , Biological Transport , Cell Membrane/drug effects , Cell Membrane/metabolism , Ligands , Metalloporphyrins/pharmacology , Models, Molecular , Oxidation-Reduction , Protein Binding , Protein Structure, Tertiary , Staphylococcus aureus/cytology , Staphylococcus aureus/drug effects , Static Electricity
14.
Leg Med (Tokyo) ; 48: 101830, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33422759

ABSTRACT

We report a sudden death of an infant due to mirtazapine poisoning. A 15-day-old newborn boy was found dead when he was sleeping beside his mother who had suffered from panic disorder for approximately 1 year. After giving birth, she complained of palpitations and shaky hands, and was prescribed mirtazapine. The deceased newborn weighed 3,282 g and his height was 55 cm. There were no autopsy findings related to the death. The mirtazapine concentration as quantitated by liquid chromatography-tandem mass spectrometry analysis was 620 ng/mL in right heart blood, and was approximately 10 times higher than the therapeutic level in adults. Because transfer of mirtazapine into breast milk is low, mirtazapine was likely administered intentionally to the newborn. Based on the newborn's immature renal, liver, and blood-brain barrier function, the cause of death was attributed to mirtazapine poisoning. Poison-related homicide in the infant is rare. We report the first case of intentional mirtazapine poisoning case in a newborn.


Subject(s)
Forensic Medicine , Homicide , Infant, Newborn , Mirtazapine/blood , Mirtazapine/poisoning , Adult , Chromatography, Liquid , Depression, Postpartum , Female , Humans , Male , Panic Disorder , Postpartum Period , Psychotic Disorders , Tandem Mass Spectrometry , Young Adult
15.
Nat Commun ; 12(1): 3412, 2021 06 07.
Article in English | MEDLINE | ID: mdl-34099696

ABSTRACT

De novo designed self-assembling peptides (SAPs) are promising building blocks of supramolecular biomaterials, which can fulfill a wide range of applications, such as scaffolds for tissue culture, three-dimensional cell culture, and vaccine adjuvants. Nevertheless, the use of SAPs in intracellular spaces has mostly been unexplored. Here, we report a self-assembling peptide, Y15 (YEYKYEYKYEYKYEY), which readily forms ß-sheet structures to facilitate bottom-up synthesis of functional protein assemblies in living cells. Superfolder green fluorescent protein (sfGFP) fused to Y15 assembles into fibrils and is observed as fluorescent puncta in mammalian cells. Y15 self-assembly is validated by fluorescence anisotropy and pull-down assays. By using the Y15 platform, we demonstrate intracellular reconstitution of Nck assembly, a Src-homology 2 and 3 domain-containing adaptor protein. The artificial clusters of Nck induce N-WASP (neural Wiskott-Aldrich syndrome protein)-mediated actin polymerization, and the functional importance of Nck domain valency and density is evaluated.


Subject(s)
Adaptor Proteins, Signal Transducing/metabolism , Biocompatible Materials/metabolism , Oncogene Proteins/metabolism , Peptides/metabolism , Actins/metabolism , Animals , Biocompatible Materials/chemistry , COS Cells , Chlorocebus aethiops , HEK293 Cells , Humans , Peptide Biosynthesis, Nucleic Acid-Independent , Peptides/chemistry , Protein Conformation, beta-Strand , Protein Domains , Protein Multimerization , Wiskott-Aldrich Syndrome Protein, Neuronal/metabolism
16.
Bioorg Med Chem ; 18(18): 6771-5, 2010 Sep 15.
Article in English | MEDLINE | ID: mdl-20708407

ABSTRACT

Structure-activity relationship studies were conducted on HIV integrase (IN) inhibitory peptides which were found by the screening of an overlapping peptide library derived from HIV-1 gene products. Since these peptides located in the second helix of Vpr are considered to have an alpha-helical conformation, Glu-Lys pairs were introduced into the i and i+4 positions to increase the helicity of the lead compound possessing an octa-arginyl group. Ala-scan was also performed on the lead compound for the identification of the amino acid residues responsible for the inhibitory activity. The results indicated the importance of an alpha-helical structure for the expression of inhibitory activity, and presented a binding model of integrase and the lead compound.


Subject(s)
HIV Integrase Inhibitors/chemistry , Peptides/chemistry , vpr Gene Products, Human Immunodeficiency Virus/chemistry , Amino Acid Sequence , Cell Line , Circular Dichroism , Glutamic Acid/chemistry , HIV Integrase Inhibitors/pharmacology , Humans , Lysine/chemistry , Molecular Sequence Data , Peptides/pharmacology , Structure-Activity Relationship
17.
ACS Omega ; 5(11): 5666-5674, 2020 Mar 24.
Article in English | MEDLINE | ID: mdl-32226843

ABSTRACT

A stapled α-helix peptide library was designed and constructed using a chemically modified phage display system for screening stapled-peptide ligands against target proteins. The α-helix peptide library, with two cysteine residues on the opposite side of the randomized face, was modified with a rigid hydrocarbon staple linker on a phage. The stapled α-helix peptide phage library was screened against galectin-3 (Gal-3), a cancer-related galactose-binding protein. The obtained stapled peptides showed a high binding affinity (K d = 0.45 µM) despite being nonsugar ligands. The stapled modification played important roles in stabilizing the α-helical structure that contributed to the high binding affinity to Gal-3. In addition, the best stapled peptide ligands showed specific binding to Gal-3 among various carbohydrate-binding proteins. Thus, the designed α-helix peptide phage library with a constrained structure by the staple linker will advance the discovery of peptide ligands with improved specificity and affinity.

18.
Blood Coagul Fibrinolysis ; 31(3): 198-206, 2020 Apr.
Article in English | MEDLINE | ID: mdl-32004201

ABSTRACT

: The effects of rapid hemorrhage on coagulopathy have been reported. However, the effects of different hemorrhage speeds on the blood coagulation/fibrinolysis system have not been investigated. This study aimed to compare different hemorrhage speeds for clarifying their effects on the coagulation/fibrinolysis system and circulation disorders in rats. Male Sprague-Dawley rats (301-396 g) were randomly assigned to five groups depending on hemorrhage speed and length of procedure: first, rapid (1.4 ml/min, 30-min bleeding); second, rapid-L (1.4 ml/min, 30-min bleeding and observation until 6 h); third, slow (0.1 ml/min, intermittently, 6-h bleeding); fourth, control (30-min observation); and fifth, control-L (6-h observation). Hemorrhage was induced by withdrawing blood until 40% of the estimated blood volume from the femoral artery. We measured vital signs, hematology, general chemistry, blood gas status, coagulation parameters, fibrinolytic markers [tissue-type plasminogen activator and plasminogen activator inhibitor one (PAI-1)], vascular endothelial damage (syndecan-1), and liver PAI-1 mRNA expression. Rapid hemorrhage induced elevation of lactate and syndecan-1 levels and prolonged prothrombin time and activated partial thromboplastin time in the rapid group. In contrast, slow hemorrhage did not induce these changes. Hemorrhage speed had no effect on plasma tissue-type plasminogen activator and hematology. Plasma PAI-1 levels were significantly increased in the rapid-L group, while liver PAI-1 mRNA levels were increased in the slow group. This study shows changes in the circulatory and fibrinolysis systems, depending on the hemorrhage speed. Hemorrhage might promote production of PAI-1, while tissue hypoxia due to rapid hemorrhage might promote release of PAI-1.


Subject(s)
Blood Coagulation/drug effects , Fibrinolysis/drug effects , Hemodynamics/drug effects , Hemorrhage/physiopathology , Animals , Humans , Male , Rats , Rats, Sprague-Dawley
19.
Drug Test Anal ; 11(4): 601-609, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30328685

ABSTRACT

The misuse of psychotropic drugs intended for medical treatment represents a recent worldwide public health concern. Quenchbody (Q-body) is a novel fluoroimmunosensor that can detect an antigen immediately without additional reagents or washing steps. Here, we describe creating Q-bodies for the detection of the antidepressant fluvoxamine (FLV) and determining optimal conditions to achieve the highest fluorescence intensity (FI). We prepared five Q-bodies with the fluorophore labeled at either the N- or C- terminus and with different linker lengths. Fluorescence was measurable within minutes, indicating the interaction of Q-bodies with FLV. The normalized FI (FI ratio) of the N-terminus labeled Q-body increased approximately 1.5-fold upon FLV addition; Q-bodies labeled at the C-terminus did not significantly increase FI. Among the fluorescence dyes used in this study, Rhodamine 6G labeled Q-body showed the best FI ratio. EC50 values of the N-terminus labeled Q-bodies were similar (23.2-224nM) regardless of linker length or labeling dye. We examined whether the Q-body could be applicable to serum matrix instead of phosphate-buffered saline. The intact serum interfered strongly with the Q-body fluorescence. However, the FI ratios of the Q-body for FLV-spiked serum filtrate, for which proteins were removed by filtration, showed a dose-dependency for detecting FLV levels. Deproteinization, which does not interfere with Q-body fluorescence measurements, is likely necessary to detect serum FLV with high sensitivity. This study demonstrates the potential of Q-body probes as a tool towards developing creative immunoassay applications.


Subject(s)
Antidepressive Agents, Second-Generation/blood , Biosensing Techniques/methods , Fluorescent Dyes/chemistry , Fluvoxamine/blood , Immunoconjugates/chemistry , Rhodamines/chemistry , Antidepressive Agents, Second-Generation/analysis , Drug Monitoring/methods , Fluvoxamine/analysis , Humans , Selective Serotonin Reuptake Inhibitors/analysis , Selective Serotonin Reuptake Inhibitors/blood
20.
Bioconjug Chem ; 19(9): 1917-20, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18707146

ABSTRACT

Development of CXCR4-specific ligands is an important issue in chemotherapy of HIV infection, cancer metastasis, and rheumatoid arthritis, and numerous potential ligands have been developed to date. However, it is difficult to assess their binding mode and specificity because of uncertainties in the structure of the CXCR4-ligand complexes. To address this problem, we have synthesized fluorophore labeled Ac-TZ14011, which is derived from T140, a powerful CXCR4 antagonist. Binding of Ac-TZ14011 to CXCR4 on the cell membrane was observed by fluorescence microscope, and analysis of the binding data produced IC 50 values of several ligands comparable to those obtained in RI-based assays. This fluorescence-based assay is applicable to explore new pharmacophores of CXCR4-specific ligands with high-throughput screening and also to screening of the other GPCR binding ligands.


Subject(s)
Biosensing Techniques/methods , Cell Membrane/metabolism , Fluorescent Dyes/chemical synthesis , Microscopy, Fluorescence/methods , Oligopeptides/chemistry , Receptors, CXCR4/metabolism , Binding Sites , Cell Membrane/chemistry , Ligands , Receptors, CXCR4/chemistry , Staining and Labeling
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