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1.
Eur J Pediatr ; 173(7): 871-8, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24419336

ABSTRACT

UNLABELLED: The present study was conducted to evaluate the burden of pneumococcal meningitis in Austrian children between 2001 and 2008. Clinical outcome was retrospectively analyzed both on discharge and on follow-up investigations. This study was based on a prospective multicentre surveillance study on hospitalized invasive pneumococcal infections in Austrian children with a total annual "study population" of about 399,000 children aged below 5 years per year. Between 2001 and 2008, 74 cases of pneumococcal meningitis were identified in children aged below 5 years. The mean annual incidence rate for pneumococcal meningitis was 2.3 per 100,000 children in this age group. In 57/74 children (mean age on admission 14.5 ± 13.3 months), outcome data on hospital discharge were available: 5 deaths (8.8%), 20 children (35.1%) with sequelae and 32 children (56.1%) without sequelae were observed. Sequelae on discharge included motor impairment in 8 children (14.0%), hearing impairment in 9 children (15.8%) and/or other complications in 14 children (24.6%). In 7/8 children with motor deficits, matching cerebral lesions were identified by neuroimaging: cerebral infarction in five children, cerebral vasculitis and cerebral abscess in one child each. In 40/57 children, long-term outcome (18.9 ± 20.2 months after discharge) could be assessed: 1 child (2.5%) died 9 months after hospital discharge, 11 children (27.5%) had one or two long-term sequelae and 28 children (70.0%) had no sequelae. Long-term sequelae included motor impairment in three children (7.5%), hearing impairment in nine children (22.5%) and other deficits in two children (5.0%). CONCLUSION: Our study confirms that pneumococcal meningitis causes high mortality and severe long-term sequelae. On long-term follow-up, we observed improvements of motor impairment, but not of hearing impairment.


Subject(s)
Meningitis, Pneumococcal/epidemiology , Streptococcus pneumoniae/isolation & purification , Adolescent , Austria/epidemiology , Child , Child, Preschool , Female , Follow-Up Studies , Hospitalization , Humans , Incidence , Infant , Male , Meningitis, Pneumococcal/microbiology , Meningitis, Pneumococcal/mortality , Prognosis , Prospective Studies , Retrospective Studies
2.
Endoscopy ; 41(2): 123-8, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19214890

ABSTRACT

UNLABELLED: SPECIFIC AUTHOR CONTRIBUTIONS: Andreas Vécsei, MD, and Ulrike Graf wrote the manuscript. All authors contributed to study design, data collection and analysis, and approved the final draft for submission. The corresponding author declares that the manuscript is submitted on behalf of all authors. BACKGROUND AND STUDY AIMS: The best mode of follow-up in celiac disease has not yet been established. The intention of this study was to clarify which noninvasive follow-up investigation - serological tests or intestinal permeability test (IPT) - correlates best with histology and whether the interval between diagnosis and follow-up affects the accuracy of these tests. PATIENTS AND METHODS: Data from adult patients with celiac disease (diagnosed between December 1989 and July 2006) followed up with biopsy, IPT, and serological tests [IgG anti-gliadin antibodies (AGA-IgG), AGA-IgA, and endomysial antibodies (EMA)] were retrieved from a computerized database. Results of noninvasive tests were compared with the persistence of villous atrophy on biopsy. Patients were divided into groups A, which comprised patients followed up within 2 years after diagnosis, and B, comprising patients followed up later than 2 years. RESULTS: Forty-seven patients were evaluable. The lactulose/mannitol (L/M) ratio had a sensitivity of 85 % and a specificity of 46.2 % for mucosal atrophy, whereas saccharose excretion showed a sensitivity of 60 % and a specificity of 52.6 %. The sensitivities of AGA-IgA and AGA-IgG were 15 % and 20 %, respectively, while specificity was 100 % for both. Validity of AGA was limited due to low number of positive results. EMA assay was 50 % sensitive and 77.8 % specific. In group A (n = 23) L/M ratio performed best in terms of sensitivity (88.9 %), whereas EMA achieved a higher specificity (71.4 %). In group B, the sensitivity of the L/M ratio decreased to 85.7 %, while the specificity of EMA increased to 91.7 %. CONCLUSIONS: In this study, none of the noninvasive tests was an accurate substitute for follow-up biopsy in detecting severe mucosal damage.


Subject(s)
Celiac Disease/pathology , Immunoglobulin A/blood , Immunoglobulin G/blood , Intestinal Absorption/physiology , Intestinal Mucosa/pathology , Adolescent , Adult , Aged , Aged, 80 and over , Celiac Disease/blood , Celiac Disease/diet therapy , Female , Follow-Up Studies , Gliadin/immunology , Humans , Male , Middle Aged , Predictive Value of Tests , Reproducibility of Results , Serologic Tests , Time Factors , Young Adult
3.
Comput Biol Med ; 102: 221-226, 2018 11 01.
Article in English | MEDLINE | ID: mdl-29739614

ABSTRACT

A large amount of digital image material is routinely captured during esophagogastroduodenoscopies but, for the most part, is not used for confirming the diagnosis process of celiac disease which is primarily based on histological examination of biopsies. Recently, considerable effort has been undertaken to make use of image material by developing semi- or fully-automated systems to improve the diagnostic workup. Recently, focus was especially laid on developing state-of-the-art deep learning architectures, exploiting the endoscopist's expert knowledge and on making systems fully automated and thereby completely observer independent. In this work, we summarize recent trends in the field of computer-aided celiac disease diagnosis based on upper endoscopy and discuss about recent progress, remaining challenges, limitations currently prohibiting a deployment in clinical practice and future efforts to tackle them.


Subject(s)
Celiac Disease/diagnostic imaging , Deep Learning , Diagnosis, Computer-Assisted/methods , Endoscopy , Image Processing, Computer-Assisted/methods , Algorithms , Automation , Biopsy , Decision Making , Duodenum/diagnostic imaging , Gastroscopy , Humans , Image Interpretation, Computer-Assisted/methods , Machine Learning , Neural Networks, Computer , Observer Variation , Pattern Recognition, Automated
4.
Clin Microbiol Infect ; 22(4): 381.e1-381.e8, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26711435

ABSTRACT

Reactivation of persistent human adenoviruses (HAdVs) is associated with high morbidity and mortality in paediatric haematopoietic stem cell transplant (HSCT) recipients. Although invasive HAdV infections mainly arise from the gastrointestinal (GI) tract, the specific sites of HAdV persistence are not well characterised. We prospectively screened biopsies from 143 non-HSCT paediatric patients undergoing GI endoscopy and monitored serial stool specimens from 148 paediatric HSCT recipients for the presence of HAdV by real-time PCR. Persistence of HAdV in the GI tract was identified in 31% of children, with the highest prevalence in the terminal ileum. In situ hybridisation and immunohistochemistry identified HAdV persistence in lymphoid cells of the lamina propria, whereas biopsies from five transplant recipients revealed high numbers of replicating HAdV in intestinal epithelial cells. The prevalence of HAdV species, the frequencies of persistence in the GI tract and reactivations post transplant indicated a correlation of intestinal HAdV shedding pre-transplant with high risk of invasive infection. HAdV persistence in the GI tract is a likely origin of infectious complications in immunocompromised children. Intestinal lymphocytes represent a reservoir for HAdV persistence and reactivation, whereas the intestinal epithelium is the main site of viral proliferation preceding dissemination. The findings have important implications for assessing the risk of life-threatening invasive HAdV infections.


Subject(s)
Adenoviruses, Human/isolation & purification , Adenoviruses, Human/physiology , Gastrointestinal Tract/virology , Virus Activation , Adenoviridae Infections , Adolescent , Biopsy , Child , Child, Preschool , Feces/virology , Female , Hematopoietic Stem Cell Transplantation , Humans , Immunocompromised Host , Infant , Intestinal Mucosa/virology , Lymphocytes/virology , Male , Prospective Studies , Real-Time Polymerase Chain Reaction , Young Adult
5.
Wien Klin Wochenschr ; 111(10): 410-3, 1999 May 21.
Article in German | MEDLINE | ID: mdl-10413835

ABSTRACT

We report the case of an infant in whom congenital syphilis was diagnosed at the age of 5 weeks. The case is remarkable because of (a) the negative venereal disease laboratory test from the cord blood, (b) the incidental diagnosis of the disease in the fifth week of life, (c) pneumonia alba being one of the symptoms, (d) the occurrence of a mild Jarisch-Herxheimer reaction after initiation of penicillin therapy and (e) the successful treatment of infection related anaemia with recombinant human erythropoietin.


Subject(s)
Neonatal Screening/methods , Syphilis, Congenital/diagnosis , False Negative Reactions , Fetal Blood/microbiology , Humans , Infant , Infant, Newborn , Male , Pneumonia/diagnostic imaging , Pneumonia/drug therapy , Pneumonia/etiology , Radiography , Syphilis, Congenital/complications
6.
Wien Klin Wochenschr ; 113(3-4): 102-6, 2001 Feb 15.
Article in English | MEDLINE | ID: mdl-11253734

ABSTRACT

Visceral leishmaniasis is usually fatal if left untreated. In Europe it is mainly caused by Leishmania infantum which is endemic in the whole Mediterranean region. While visceral leishmaniasis classically affects children, adults increasingly suffer infections in regions which are known to be endemic for HIV. Nowadays up to 70% of the patients with visceral leishmaniasis in southern Europe are HIV-infected adults. The diagnosis is known to be especially difficult to establish in this group of patients because of a frequently atypical clinical presentation, but even in non-HIV-infected patients visceral leishmaniasis often represents a diagnostic challenge particularly when the patient is living in a non-endemic region. We report on four children with visceral leishmaniasis diagnosed at St. Anna Children's Hospital, Vienna, in the last decade. Diagnostic difficulties arose (1) from inexperience with this rare disease, (2) from a long incubation period (6 to 8 months) and (3) from a travel history apparently unsuspicious for the contraction of what is considered a 'tropical' disease. In one case, specific problems resulted (4) from clinical appearance and laboratory data mimicking hemophagocytic lymphohistiocytosis. Consequently even in regions where leishmaniasis is not endemic, diagnostic efforts should be undertaken to rule out this disease especially in patients with the presumptive diagnosis of hemophagocytic lymphohistiocytosis.


Subject(s)
Leishmaniasis, Visceral/epidemiology , Adult , Age Factors , Animals , Antibodies, Protozoan/analysis , Austria/epidemiology , Child, Preschool , Diagnosis, Differential , Female , Fluorescent Antibody Technique, Indirect , Humans , Immunoglobulin G/analysis , Infant , Leishmania donovani/immunology , Leishmaniasis, Visceral/diagnosis , Male , Travel
7.
Comput Methods Programs Biomed ; 112(3): 694-712, 2013 Dec.
Article in English | MEDLINE | ID: mdl-23981585

ABSTRACT

Due to the optics used in endoscopes, a typical degradation observed in endoscopic images are barrel-type distortions. In this work we investigate the impact of methods used to correct such distortions in images on the classification accuracy in the context of automated celiac disease classification. For this purpose we compare various different distortion correction methods and apply them to endoscopic images, which are subsequently classified. Since the interpolation used in such methods is also assumed to have an influence on the resulting classification accuracies, we also investigate different interpolation methods and their impact on the classification performance. In order to be able to make solid statements about the benefit of distortion correction we use various different feature extraction methods used to obtain features for the classification. Our experiments show that it is not possible to make a clear statement about the usefulness of distortion correction methods in the context of an automated diagnosis of celiac disease. This is mainly due to the fact that an eventual benefit of distortion correction highly depends on the feature extraction method used for the classification.


Subject(s)
Automation , Celiac Disease/classification , Celiac Disease/diagnosis , Humans
8.
Med Image Anal ; 16(1): 75-86, 2012 Jan.
Article in English | MEDLINE | ID: mdl-21624846

ABSTRACT

In this work we propose a novel method to describe local texture properties within color images with the aim of automated classification of endoscopic images. In contrast to comparable Local Binary Patterns operator approaches, where the respective texture operator is almost always applied to each color channel separately, we construct a color vector field from an image. Based on this field the proposed operator computes the similarity between neighboring pixels. The resulting image descriptor is a compact 1D-histogram which we use for a classification using the k-nearest neighbors classifier. To show the usability of this operator we use it to classify magnification-endoscopic images according to the pit pattern classification scheme. Apart from that, we also show that compared to previously proposed operators we are not only able to get competitive classification results in our application scenario, but that the proposed operator is also able to outperform the other methods either in terms of speed, feature compactness, or both.


Subject(s)
Algorithms , Colonic Polyps/pathology , Color , Colorimetry/methods , Endoscopy, Gastrointestinal/methods , Image Interpretation, Computer-Assisted/methods , Pattern Recognition, Automated/methods , Artificial Intelligence , Humans , Image Enhancement/methods , Reproducibility of Results , Sensitivity and Specificity
9.
Comput Methods Programs Biomed ; 107(3): 565-81, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22325257

ABSTRACT

In this work we propose a method to extract shape-based features from endoscopic images for an automated classification of colonic polyps. This method is based on the density of pits as used in the pit pattern classification scheme which is commonly used for the classification of colonic polyps. For the detection of pits we employ a noise-robust variant of the LBP operator. To be able to be robust against local texture variations we extend this operator by an adaptive thresholding. Based on the detected pit candidates we compute a Delaunay triangulation and use the edge lengths of the resulting triangles to construct histograms. These are then used in conjunction with the k-NN classifier to classify images. We show that, compared to a previously developed method, we are not only able to almost always get higher classification results in our application scenario, but that the proposed method is also able to significantly outperform the previously developed method in terms of the computational demand.


Subject(s)
Colonic Polyps/diagnosis , Colonoscopy/methods , Aged , Algorithms , Automation , Colonic Polyps/pathology , Computer Simulation , Endoscopes , Endoscopy/methods , Humans , Image Processing, Computer-Assisted/methods , Medical Informatics , Middle Aged , Models, Statistical , Normal Distribution , Pattern Recognition, Automated/methods , Polyps , Reproducibility of Results
10.
Comput Biol Med ; 41(6): 313-25, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21513927

ABSTRACT

Automated classification of duodenal texture patches with histological ground truth in case of pediatric celiac disease is proposed. The classical focus of classification in this context is a two-class problem: mucosa affected by celiac disease and unaffected duodenal tissue. We extend this focus and apply classification according to a modified Marsh scheme into four classes. In addition to other techniques used previously for classification of endoscopic imagery, we apply local binary pattern (LBP) operators and propose two new operator types, one of which adapts to the different properties of wavelet transform subbands. The achieved results are promising in that operators based on LBP turn out to achieve better results compared to many other texture classification techniques as used in earlier work. Specifically, the proposed wavelet-based LBP scheme achieved the best overall accuracy of all feature extraction techniques considered in the two-class case and was among the best in the four-class scheme. Results also show that a classification into four classes is feasible in principle however when compared to the two-class case we note that there is still room for improvement due to various reasons discussed.


Subject(s)
Celiac Disease/classification , Celiac Disease/pathology , Diagnosis, Computer-Assisted/methods , Image Processing, Computer-Assisted/methods , Algorithms , Case-Control Studies , Child , Databases, Factual , Endoscopy, Gastrointestinal , Humans , Intestinal Mucosa/pathology
11.
Vaccine ; 27(30): 3963-8, 2009 Jun 19.
Article in English | MEDLINE | ID: mdl-19393711

ABSTRACT

This study monitors the epidemiology of invasive pneumococcal diseases (IPD) in hospitalized children up to 60 months of age before (February 2001-October 2004) and after (November 2004-January 2007) the introduction of a national risk group immunization program with "Prevenar" in Austria. The IPD incidence rates, per 100,000, for IPD were 7.6 before and 6.4 after the risk group immunization program, while there was a significant reduction (p<0.05) for meningitis, 3.1 before and 1.6 after. Overall, the most commonly observed serotypes were 14 (34.2%), 6B (11.7%), and 23F (6.7%). 71.7% of the identified strains were vaccine types; 12.5% were vaccine-related serotypes. No clinically relevant changes in the incidence rate of IPDs or shift/replacement of serotypes was documented. Antimicrobial resistance predominated against erythromycin (32.5%) and clarithromycin (26.7%). Our data show that this risk group vaccination program had no impact on the incidence of IPD in young children.


Subject(s)
Health Policy , Immunization Programs , Pneumococcal Infections/epidemiology , Pneumococcal Infections/prevention & control , Pneumococcal Vaccines/administration & dosage , Pneumococcal Vaccines/immunology , Vaccination/statistics & numerical data , Animals , Anti-Bacterial Agents/pharmacology , Austria/epidemiology , Child, Preschool , Clarithromycin/pharmacology , Drug Resistance, Bacterial , Erythromycin/pharmacology , Female , Heptavalent Pneumococcal Conjugate Vaccine , Humans , Incidence , Infant , Male , Meningitis, Pneumococcal/epidemiology , Meningitis, Pneumococcal/microbiology , Meningitis, Pneumococcal/prevention & control , Pneumococcal Infections/microbiology , Serotyping , Streptococcus pneumoniae/classification , Streptococcus pneumoniae/isolation & purification
12.
Pediatr Nephrol ; 16(11): 898-900, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11685597

ABSTRACT

We report an 8-year-old Caucasian boy who presented with steroid-resistant nephrotic syndrome. Renal biopsy showed the cellular variant of focal segmental glomerulosclerosis (FSGS). Within 1 year he received a series of therapies that have induced remission in other patients with this disease, all to no avail (conventional-dose cyclosporin A, methylprednisolone pulse therapy, high-dose cyclosporin A, and therapy with mycophenolate mofetil). He achieved remission after five sessions of plasma exchange. This case argues for aggressive therapy of resistant nephrotic syndrome in the native kidney. Plasma exchange should be considered as a possible rescue therapy arm in future study protocols.


Subject(s)
Glomerulosclerosis, Focal Segmental/therapy , Mycophenolic Acid/analogs & derivatives , Plasmapheresis , Child , Cyclosporine/administration & dosage , Cyclosporine/therapeutic use , Dose-Response Relationship, Drug , Drug Resistance , Glucocorticoids/therapeutic use , Humans , Immunosuppressive Agents/administration & dosage , Immunosuppressive Agents/therapeutic use , Male , Methylprednisolone/therapeutic use , Mycophenolic Acid/therapeutic use , Remission Induction
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