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1.
BMC Genomics ; 19(1): 686, 2018 09 19.
Article in English | MEDLINE | ID: mdl-30231871

ABSTRACT

Following the publication of this article [1], the authors informed us of the following error.

2.
Plant Dis ; 102(11): 2341-2351, 2018 11.
Article in English | MEDLINE | ID: mdl-30199327

ABSTRACT

Anthracnose caused by Colletotrichum sublineola is an important disease of cultivated sorghum (Sorghum bicolor) worldwide. Anthracnose is also common on the ubiquitous wild sorghum relative Johnsongrass (S. halepense). Analysis of repetitive molecular fingerprinting markers revealed that isolates of C. sublineola from both hosts in the southeastern United States were genotypically diverse, with relatively few haplotypes found in more than one location. With few exceptions, isolates recovered from S. bicolor belonged to a population that was genetically distinct from the population recovered from S. halepense. Twenty-three isolates from cultivated sorghum were all pathogenic to at least one of 13 heritage inbred lines of S. bicolor. In all, 4 of 10 isolates from S. halepense were also pathogenic to one or more of the lines, while the rest caused no disease in greenhouse assays. The four pathogenic isolates from S. halepense were less aggressive, on average, than isolates from S. bicolor, although the ranges overlapped. Pathogenicity tests involving 15 representative pathogenic isolates from S. bicolor and S. halepense on eight heritage inbred lines of S. bicolor identified 12 races. The combined results of this study demonstrated that C. sublineola comprises two separate host-associated subpopulations in the field, even though some isolates from S. halepense were able to cause disease on S. bicolor under ideal greenhouse conditions. Nonetheless, the apparent existence of infrequent cross-infection events in the field, indicated by molecular fingerprinting, suggests that Johnsongrass has the potential to serve as a refuge and an incubator for genetic diversity in C. sublineola, which can complicate efforts to develop and deploy resistant sweet sorghum varieties in the region.


Subject(s)
Colletotrichum/genetics , Genetic Variation , Plant Diseases/microbiology , Sorghum/microbiology , Cluster Analysis , Colletotrichum/isolation & purification , Colletotrichum/pathogenicity , Genotype , Geography , Haplotypes , Phylogeny , Southeastern United States
3.
BMC Genomics ; 18(1): 67, 2017 01 10.
Article in English | MEDLINE | ID: mdl-28073340

ABSTRACT

BACKGROUND: Colletotrichum graminicola and C. sublineola cause anthracnose leaf and stalk diseases of maize and sorghum, respectively. In spite of their close evolutionary relationship, the two species are completely host-specific. Host specificity is often attributed to pathogen virulence factors, including specialized secondary metabolites (SSM), and small-secreted protein (SSP) effectors. Genes relevant to these categories were manually annotated in two co-occurring, contemporaneous strains of C. graminicola and C. sublineola. A comparative genomic and phylogenetic analysis was performed to address the evolutionary relationships among these and other divergent gene families in the two strains. RESULTS: Inoculation of maize with C. sublineola, or of sorghum with C. graminicola, resulted in rapid plant cell death at, or just after, the point of penetration. The two fungal genomes were very similar. More than 50% of the assemblies could be directly aligned, and more than 80% of the gene models were syntenous. More than 90% of the predicted proteins had orthologs in both species. Genes lacking orthologs in the other species (non-conserved genes) included many predicted to encode SSM-associated proteins and SSPs. Other common groups of non-conserved proteins included transporters, transcription factors, and CAZymes. Only 32 SSP genes appeared to be specific to C. graminicola, and 21 to C. sublineola. None of the SSM-associated genes were lineage-specific. Two different strains of C. graminicola, and three strains of C. sublineola, differed in no more than 1% percent of gene sequences from one another. CONCLUSIONS: Efficient non-host recognition of C. sublineola by maize, and of C. graminicola by sorghum, was observed in epidermal cells as a rapid deployment of visible resistance responses and plant cell death. Numerous non-conserved SSP and SSM-associated predicted proteins that could play a role in this non-host recognition were identified. Additional categories of genes that were also highly divergent suggested an important role for co-evolutionary adaptation to specific host environmental factors, in addition to aspects of initial recognition, in host specificity. This work provides a foundation for future functional studies aimed at clarifying the roles of these proteins, and the possibility of manipulating them to improve management of these two economically important diseases.


Subject(s)
Colletotrichum/genetics , Genomics , Host Specificity/genetics , Colletotrichum/physiology , Conserved Sequence/genetics , Evolution, Molecular , Genes, Fungal/genetics , Molecular Sequence Annotation , Multigene Family/genetics , Species Specificity
4.
Plant Dis ; 101(9): 1578-1587, 2017 Sep.
Article in English | MEDLINE | ID: mdl-30677336

ABSTRACT

Sweet sorghum (Sorghum bicolor) has been grown in the southeastern United States for more than 150 years on a relatively limited scale, primarily for forage and for the production of table syrup. However, interest in the crop has increased recently due to its potential as a feedstock for biofuels. Colletotrichum sublineola is the causal agent of anthracnose on cultivated sorghum and on the wild sorghum relative Johnsongrass (S. halepense). Anthracnose is an important disease of grain sorghum worldwide, but little is known about its impact on sweet sorghum in the U.S. The aggressiveness of four C. sublineola isolates collected from sweet and grain sorghum and from Johnsongrass at various locations across Kentucky was measured as disease incidence and severity on the susceptible heirloom sweet sorghum inbred Sugar Drip in inoculated field trials. The isolate from sweet sorghum was the most aggressive, while the two Johnsongrass isolates caused only minimal disease symptoms. Disease incidences of up to 99%, and severities of up to 16.7% of leaf area affected, had no negative effect on the yield of biomass, grain, juice, or Brix. Removal of sorghum seed heads increased Brix in the stalks and leaves, but did not affect susceptibility to anthracnose. The same group of fungal isolates was evaluated for aggressiveness in greenhouse assays on juvenile plants, and in the laboratory on seedlings and detached leaf sheaths. These protocols will be useful for prescreening sorghum germplasm for new sources of resistance or for characterizing the aggressiveness of new fungal isolates.


Subject(s)
Colletotrichum , Plant Diseases , Sorghum , Colletotrichum/physiology , Plant Diseases/microbiology , Plant Diseases/prevention & control , Sorghum/microbiology
5.
Plant Dis ; 100(11): 2194-2203, 2016 Nov.
Article in English | MEDLINE | ID: mdl-30682908

ABSTRACT

Multiple species of Colletotrichum can cause bitter rot disease of apple, but the identities and relative representation of the species causing the disease in Kentucky are unknown. In total, 475 Colletotrichum isolates were collected from diseased apple fruit in 25 counties and characterized both morphologically and by using various molecular approaches. Multigene sequence analyses revealed that sample isolates belonged to several newly erected species within the Colletotrichum acutatum and C. gloeosporioides species complexes. The isolates were identified as C. fioriniae and C. nymphaeae, which reside within the C. acutatum species complex, and C. siamense, C. theobromicola, and C. fructicola, which are placed within the C. gloeosporioides species complex. C. fioriniae was the most common species causing bitter rot in Kentucky, comprising more than 70% of the isolates. Infectivity tests on detached fruit showed that C. gloeosporioides species-complex isolates were more aggressive than isolates in the C. acutatum species complex. However, isolates within the C. acutatum species complex produced more spores on lesions compared with isolates within the C. gloeosporioides species complex. Aggressiveness varied among individual species within a species complex. C. siamense was the most aggressive species identified in this study. Within the C. acutatum species complex, C. fioriniae was more aggressive than C. nymphaeae, causing larger, deeper lesions. Apple cultivar did not have a significant effect on lesion development. However, Colletotrichum spp. produced more spores on 'Red Stayman Winesap' than on 'Golden Delicious'. Fungicide sensitivity tests revealed that the C. acutatum species complex was more tolerant to thiophanate-methyl, myclobutanil, trifloxystrobin, and captan compared with the C. gloeosporioides species complex. The study also revealed that mycelial growth of C. siamense was more sensitive to tested fungicides compared with C. fructicola and C. theobromicola. These research findings emphasize the importance of accurate identification of Colletotrichum spp. within each species complex, because they exhibit differences in pathogenicity and fungicide sensitivity.

6.
Plant Dis ; 99(11): 1622-1632, 2015 Nov.
Article in English | MEDLINE | ID: mdl-30695966

ABSTRACT

Fusarium graminearum species complex (FGSC) members cause Fusarium head blight (FHB) of wheat (Triticum aestivum L.) and small grains in the United States. The U.S. population is diverse and includes several genetically distinct local emergent subpopulations, some more aggressive and toxigenic than the majority population. Kentucky is a transition zone between the Mid-Atlantic and Midwestern wheat production areas. Sixty-eight Fusarium strains were isolated from symptomatic wheat heads from central and western Kentucky and southern Indiana in 2007. A multilocus genotyping assay and a variety of additional molecular markers, including some novel markers developed using the F. graminearum genome sequence, were used to characterize the pathogen population. Five of the isolates were identified as members of two non-FGSC species, F. acuminatum and F. cf. reticulatum, but they did not cause symptoms in greenhouse tests. All the FGSC isolates belonged to the 15-ADON chemotype of F. graminearum. Comparative genetic analysis using variable nuclear tandem repeat (VNTR) markers indicated that the population in Kentucky and Indiana belonged to the dominant North American population, with some diversification likely due to local evolution. Telomere and RFLP fingerprinting markers based on repetitive sequences revealed a high degree of genetic diversity within the population, with unique genotypes found at each location, and multiple genotypes isolated from the same head.

7.
Encephale ; 38(3): 248-56, 2012 Jun.
Article in French | MEDLINE | ID: mdl-22726413

ABSTRACT

INTRODUCTION: Space and motion discomfort (SMD) refers to various symptoms that occur in environments with unreliable visual and kinesthetic information that do not permit adequate spatial orientation. Some studies have demonstrated that there is a stable and predictable relationship between vestibular dysfunction and anxiety disorders. Further, vestibular dysfunction can predispose or trigger the development of panic disorder with or without agoraphobia (PD/A) or reinforce phobic avoidance. It therefore seems clinically useful to develop and validate instruments for evaluating SMD in various populations. Measuring SMD could facilitate identification of individuals with PD/A who present comorbid vestibular dysfunction. Jacob et al. developed and validated such a questionnaire: the Situational characteristics questionnaire (SitQ). This questionnaire evaluates the presence of symptoms such as dizziness, vertigo, and instability under specific conditions. The SitQ comprises two subscales that measure SMD and one subscale (agoraphobia) that measures agoraphobic avoidance behaviours. The instrument has two sections. The first section is composed of the SMD-I and agoraphobia subscales, containing 19 and seven items, respectively. Each item consists of two contrasting descriptors of a specific situation or environment. The respondent is required to indicate to what extent the two described situations or environments cause discomfort. Each item includes a "criterion" descriptor for the situation (i.e., a descriptor that is presumed to engender SMD) and an alternative (non-criterion) descriptor. The second section comprises the SMD-II scale; this scale is composed of nine criterion situations, for which non-criterion situations are not supplied. The instrument takes approximately 20 minutes to complete. OBJECTIVE: The present study focuses on the validation of the French-language version of the SitQ: the questionnaire des caractéristiques situationnelles (QCS). METHOD: The sample was composed of French Canadians recruited across Quebec from an anxiety disorders treatment clinic, general psychiatric care clinics, a community organization for individuals with anxiety disorders, advertisements in local newspapers, and ads posted in various public locations. The sample included 141 participants who met the criteria for lifetime PD/A. Participants reported current PD/A (n=73) or PD/A in remission (n=68). The control sample was recruited from undergraduate courses in various disciplines. Two hundred and thirty-five (n=235) students completed the questionnaires. Data from 63 (26.8%) participants were excluded from the analyses due to failure to complete all of the research questionnaires. RESULTS: Analysis of the global descriptive data and the descriptive data for each dependent variable revealed that the data were independent of sociodemographic variables and respected the assumptions of normal distribution (skewness and kurtosis). Parametric tests were subsequently conducted. Using the combined data from the control and clinical groups, the internal consistency of the scales was analyzed using Cronbach's alpha. The SMD-I and SMD-II scales demonstrated good homogeneity. The results were comparable or superior to those obtained with the English-language version of the questionnaire. The agoraphobia scale demonstrated weaker internal consistency and corresponding weaker homogeneity. This result was consistent with that of the original version of the agoraphobia scale; this scale was eliminated for the subsequent analyses. Construct validity was analyzed via t-tests comparing clinical and control groups. Effect sizes were estimated using percentage of variance explained. The SMD-I scale demonstrated weak construct validity and was also eliminated from subsequent analyses. The SMD-II scale demonstrated good construct validity and provided an adequate measure of the theoretical construct of SMD. This scale permitted discrimination of participants according to the presence or absence of PD/A. It is therefore possible to identify participants with PD/A by their level of SMD. This result is comparable to that of Jacob et al. CONCLUSION: The results of the present study are generally consistent with the results of the validation of the original version of the questionnaire. However, the SMD-I and agoraphobia scales in the French-language version of the measure did not achieve a level of significance sufficient to definitively establish validity.


Subject(s)
Agoraphobia/psychology , Kinesthesis , Motion Sickness/psychology , Orientation , Panic Disorder/psychology , Space Perception , Surveys and Questionnaires , Adult , Agoraphobia/diagnosis , Female , Humans , Language , Male , Middle Aged , Motion Sickness/diagnosis , Panic Disorder/diagnosis , Psychometrics/statistics & numerical data , Quebec , Reference Values , Reproducibility of Results , Risk Factors , Translating
8.
Fungal Genet Biol ; 45(6): 973-83, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18448365

ABSTRACT

A transposon-based split-marker protocol was used to produce insertional mutations in the fadA ortholog of the maize anthracnose pathogen Colletotrichum graminicola. The mutants grew more slowly in culture, produced fewer oval spores, produced fusiform rather than falcate phialospores, lost their normal clockwise spiral growth pattern in culture, and were significantly reduced in their pathogenicity to maize stalks and leaves. The differential effect of the fadA mutation on oval spore versus phialospore production suggests that there are differences in the signaling pathways that regulate these two types of sporulation. It has been suggested that oval spores function in anthracnose lesion extension. In maize stalks, production of oval spores appeared to be relatively unaffected in the mutant strains, but production of vegetative hyphae and elongation of primary lesions were both reduced. This suggests that vegetative hyphae play a more important role than oval spores in primary lesion development. However, production of discontinuous secondary lesions in maize stalks infected by mutant strains did not appear to be seriously affected, and thus oval spores may play a more important role in that process.


Subject(s)
Colletotrichum/growth & development , Colletotrichum/pathogenicity , Fungal Proteins/metabolism , Plant Diseases/microbiology , Zea mays/microbiology , Amino Acid Sequence , Base Sequence , Blotting, Northern , Cloning, Molecular , Colletotrichum/genetics , Colletotrichum/metabolism , Fungal Proteins/chemistry , Fungal Proteins/genetics , Genetic Complementation Test , Molecular Sequence Data , Mutagenesis, Insertional , Mutation , Phenotype , Plant Leaves/growth & development , Plant Leaves/microbiology , Plant Stems/growth & development , Plant Stems/microbiology , Sequence Alignment , Spores, Fungal/cytology , Spores, Fungal/growth & development , Zea mays/growth & development
9.
Phytopathology ; 97(4): 438-47, 2007 Apr.
Article in English | MEDLINE | ID: mdl-18943284

ABSTRACT

ABSTRACT Colonization of wounded maize stalks by a wild-type strain of Colletotrichum graminicola was compared with colonization by a C. graminicola mutant that is avirulent on maize leaves, and by a wild-type strain of C. sublineolum that is normally a pathogen of sorghum but not maize. Local infection by all strains at the wound site resulted in formation of primary lesions consisting of disintegrated parenchyma cells beneath an intact rind and epidermis. However, subsequent rapid longitudinal expansion of the primary lesion occurred only in infections with the wild-type C. graminicola strain, and proceeded specifically through the fiber cells associated with the vascular bundles and the rind. Hyphae emerged from the fiber cells to produce discontinuous secondary lesions. There was no evidence that C. graminicola is a vascular wilt pathogen. Resistance of wounded cv. Jubilee maize stalks to the mutant strain of C. graminicola and to C. sublineolum was associated with restriction of colonization and spread of the pathogen through the fibers, as well as with the limitation of localized destruction of parenchyma cells at the wound site.

10.
Mycologia ; 99(3): 368-77, 2007.
Article in English | MEDLINE | ID: mdl-17883028

ABSTRACT

The maize anthracnose stalk-rot fungus Colletotrichum graminicola infects its host primarily through wounds in the stalks that are caused by insects. However it also can cause stalk-rot disease without wounding. It is not known how the pathogen enters stalks in the absence of wounds. Studies have suggested that direct invasion through the highly lignified rind tissues is not a viable means of entry. A cytological approach was used to investigate the ability of C. graminicola to penetrate and colonize intact maize stalks. The pathogen had a significant capacity for direct penetration, but this mechanism of infection was much slower and less efficient than penetration through wounds. The fungus breached the lignified rind fibers by passing through small openings in the cell walls via narrow hyphal connections. Epidermal cells and rind fiber cells did not appear to become rotted. Rotting only occurred once the pathogen had penetrated into the pith parenchyma cells. To our surprise the closely related fungus C. sublineolum, which is not normally a pathogen of maize, also was capable of infecting intact maize stalks, although to a lesser degree than C. graminicola. The two species also were observed on intact roots and leaves, and C. sublineolum was incapable of infecting those tissues whereas C. graminicola efficiently colonized both. This suggests the interesting possibility that nonhost resistance to C. sublineolum is conditional and perhaps also tissue-specific.


Subject(s)
Colletotrichum/pathogenicity , Plant Diseases/microbiology , Zea mays/microbiology , Colletotrichum/growth & development , Plant Leaves/microbiology , Plant Roots/microbiology , Plant Stems/microbiology , Virulence
11.
Encephale ; 33(5): 738-43, 2007 Oct.
Article in French | MEDLINE | ID: mdl-18357843

ABSTRACT

This paper reviews the literature on the links between panic disorder with or without agoraphobia and vestibular dysfunction. To date, it has been established that these conditions are encountered in high proportions in psychiatric samples and in patients consulting for equilibrium problems. Three models have tried to hypothesize the mechanisms underlying this co-occurrence. Agoraphobic avoidance and high anxiety level seem to be characteristics of individuals affected by both conditions. Moreover, vestibular dysfunctions appear to be predicted by individuals feeling uncomfortable in situations characterized by spatial and/or motor particularities. Additional studies on that topic would be beneficial. Further studies should try to better understand people with both panic disorder and dysfunctions of the equilibrium system. These individuals who suffer from both conditions may avoid activities that particularly call upon the equilibrium system, such as walking on uneven surfaces or undertaking some forms of transportation. The cognitive substrates pertaining to the feared consequences of the physical symptoms may also differentiate this group from uncomplicated anxiety disorder patients. For example, these individuals with uncomplicated panic disorder may fear having a heart attack or suffocating as a result of a panic attack, whereas individuals suffering from both conditions may be more prone to apprehending falling or vomiting. The paper also proposes (1) the analysis of characteristics of individuals in remission from both conditions so that effective components of treatment are emphasized, and (2) targets for treatment for these comorbid patients.


Subject(s)
Panic Disorder/epidemiology , Panic Disorder/etiology , Vertigo , Vestibule, Labyrinth/physiopathology , Humans , Prevalence , Psychophysiologic Disorders/diagnosis , Psychophysiologic Disorders/epidemiology , Psychophysiologic Disorders/psychology , Vertigo/epidemiology , Vertigo/physiopathology , Vertigo/psychology
12.
Genetics ; 146(2): 541-51, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9178005

ABSTRACT

The genes defining multiple B mating types in the wood-rotting mushroom Schizophyllum commune are predicted to encode multiple pheromones and pheromone receptors. These genes are clustered in each of two recombinable and independently functioning loci, B alpha and B beta. A difference in specificity at either locus between a mated pair of individuals initiates an identical series of events in sexual morphogenesis. The B alpha 1 locus was recently found to contain genes predicted to encode three lipopeptide pheromones and a pheromone receptor with a seven-transmembrane domain. These gene products interact in hetero-specific pairs, the pheromone of one B alpha specificity with the receptor of any one of the other eight B alpha specificities, and are likely to activate a signaling cascade similar to that known for mating in Saccharomyces cerevisiae. We report here that the B beta 1 locus also contains at least three pheromone genes and one pheromone receptor gene, which function similarly to the genes in the B alpha 1 locus, but only within the series of B beta specificities. A comparison of the DNA sequences of the B alpha 1 and B beta 1 loci suggests that each arose from a common ancestral sequence, allowing us to speculate about the evolution of this unique series of regulatory genes.


Subject(s)
Chemoreceptor Cells , Genes, Fungal , Genes, Mating Type, Fungal , Pheromones/genetics , Schizophyllum/genetics , Amino Acid Sequence , Blotting, Northern , Blotting, Southern , Cell Nucleus/metabolism , Chemoreceptor Cells/chemistry , Chemoreceptor Cells/metabolism , Cloning, Molecular , Evolution, Molecular , Molecular Sequence Data , Pheromones/chemistry , Pheromones/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Schizophyllum/chemistry , Schizophyllum/physiology , Sequence Analysis, DNA , Transformation, Genetic , Up-Regulation
13.
Genetics ; 158(4): 1491-503, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11514441

ABSTRACT

Schizophyllum commune has thousands of mating types defined in part by numerous lipopeptide pheromones and their G-protein-coupled receptors. These molecules are encoded within multiple versions of two redundantly functioning B mating-type loci, B alpha and B beta. Compatible combinations of pheromones and receptors, produced by individuals of different B mating types, trigger a pathway of fertilization required for sexual development. Analysis of the B beta 2 mating-type locus revealed a large cluster of genes encoding a single pheromone receptor and eight different pheromones. Phenotypic effects of mutations within these genes indicated that small changes in both types of molecules could significantly alter their specificity of interaction. For example, a conservative amino acid substitution in a pheromone resulted in a gain of function toward one receptor and a loss of function with another. A two-amino-acid deletion from a receptor precluded the mutant pheromone from activating the mutant receptor, yet this receptor was activated by other pheromones. Sequence comparisons provided clues toward understanding how so many variants of these multigenic loci could have evolved through duplication and mutational divergence. A three-step model for the origin of new variants comparable to those found in nature is presented.


Subject(s)
Chemoreceptor Cells/metabolism , Pheromones/metabolism , Schizophyllum/metabolism , Schizophyllum/physiology , Alanine/chemistry , Amino Acid Sequence , Amino Acids/chemistry , Blotting, Southern , Cell Membrane/metabolism , Cell Nucleus/metabolism , Cysteine/chemistry , DNA/metabolism , Gene Library , Genes, Fungal , Genes, Mating Type, Fungal , Models, Genetic , Molecular Sequence Data , Mutagenesis, Site-Directed , Mutation , Polymerase Chain Reaction , Reproduction , Sequence Homology, Amino Acid
14.
Mol Plant Microbe Interact ; 13(12): 1356-65, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11106028

ABSTRACT

We have developed a restriction enzyme-mediated insertional mutagenesis (REMI) system for the maize pathogen Colletotrichum graminicola. In this report, we demonstrate the utility of a REMI-based mutagenesis approach to identify novel pathogenicity genes. Use of REMI increased transformation efficiency by as much as 27-fold over transformations with linearized plasmid alone. Ninety-nine transformants were examined by Southern analysis, and 51% contained simple integrations consisting of one copy of the vector integrated at a single site in the genome. All appeared to have a plasmid integration at a unique site. Sequencing across the integration sites of six transformants demonstrated that in all cases the plasmid integration occurred at the corresponding restriction enzyme-recognition site. We used an in vitro bioassay to identify two pathogenicity mutants among 660 transformants. Genomic DNA flanking the plasmid integration sites was used to identify corresponding cosmids in a wild-type genomic library. The pathogenicity of one of the mutants was restored when it was transformed with the cosmids.


Subject(s)
Colletotrichum/genetics , Colletotrichum/pathogenicity , Zea mays/microbiology , Blotting, Southern , Genetic Complementation Test , Mutagenesis, Insertional , Plant Diseases , Plant Leaves/microbiology , Plasmids , Protoplasts/physiology , Restriction Mapping , Transformation, Bacterial
15.
Mol Plant Microbe Interact ; 15(2): 120-8, 2002 Feb.
Article in English | MEDLINE | ID: mdl-11876424

ABSTRACT

Colletotrichum graminicola causes anthracnose leaf blight and stalk rot of maize. We used restriction-enzyme mediated insertional (REMI) mutagenesis to identify a gene in this fungus that is required for pathogenicity to both stalks and leaves. The predicted polypeptide encoded by this gene, which we have named CPR1, is similar to a family of proteins that comprise one subunit of the eukaryotic microsomal signal peptidase. The nonpathogenic CPR1 REMI mutant contains a plasmid integration in the 3' untranslated region of the gene, 19 bp downstream from the stop codon. The result is a significant reduction in transcript levels in comparison to the wild type, perhaps as a result of increased transcript instability. We were unable to knock out the CPR1 gene, and it may be essential for viability. Microscopic examination of the REMI mutant on maize leaves revealed that it is fully capable of penetrating and colonizing host cells during the initial, biotrophic phases of the disease interaction but, unlike the wild type, it appears to be unable to switch to a necrotrophic mode of growth. We suggest that the CPR1 REMI mutant may be unable to secrete sufficient quantities of degradative enzymes to support that transition. The CPR1 REMI mutant provides us with a useful tool for future studies of the role of fungal protein transport in this important stalk rot disease of maize.


Subject(s)
Geotrichum/genetics , Membrane Proteins , Serine Endopeptidases/genetics , Zea mays/microbiology , Amino Acid Sequence , Base Sequence , Geotrichum/enzymology , Geotrichum/pathogenicity , Molecular Sequence Data , Plant Leaves/microbiology , Plant Proteins/genetics , Plant Stems/microbiology , Restriction Mapping , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Sequence Homology, Amino Acid , Virulence
16.
Hum Pathol ; 24(11): 1168-74, 1993 Nov.
Article in English | MEDLINE | ID: mdl-8244316

ABSTRACT

We report the clinicopathologic, immunohistochemical, and electron microscopic study of two cases of juxtaglomerular cell tumor of the kidney with a hitherto unreported dominant papillary pattern. Both tumors were associated with high blood pressure that did not respond to medical therapy, but that returned to normal after removal of the kidney. They were well delineated, tan, and had no necrosis. The cores of the papillary structures consisted of polygonal cells found to express renin by immunohistochemistry and to contain renin protogranules by electron microscopy. The papillary fronds were covered by one layer of cuboidal epithelial cells that did not stain for renin and had ultrastructural features reminiscent of the collecting duct epithelium. These tumors must be differentiated from malignant papillary tumors of the kidney, such as papillary clear cell carcinoma, transitional cell carcinoma, and collecting duct carcinoma.


Subject(s)
Adenocarcinoma/diagnosis , Adenocarcinoma/pathology , Kidney Neoplasms/diagnosis , Kidney Neoplasms/pathology , Adenocarcinoma/chemistry , Adult , Carcinoma/diagnosis , Carcinoma/pathology , Carcinoma, Transitional Cell/diagnosis , Carcinoma, Transitional Cell/pathology , Diagnosis, Differential , Epithelium/chemistry , Epithelium/pathology , Humans , Immunohistochemistry , Kidney Neoplasms/chemistry , Male , Microscopy, Electron , Renin/analysis
17.
Org Lett ; 2(17): 2655-8, 2000 Aug 24.
Article in English | MEDLINE | ID: mdl-10990420

ABSTRACT

[reaction: see text](-)-Sparteine-mediated lithiation/transmetalation/substitution of N-Boc allylic amines provides anti-configured homoaldol precursors in yields of 38-85% and enantiomeric ratios of 83:17-99:1. Subsequent O-protection and hydrolysis allows access to O-protected homoaldol adducts in good yields. The absolute configurations of the homoaldol products have been assigned by calculation of optical rotations and by X-ray crystallography of derivatives. A stereochemical course of reaction for the lithiation/transmetalation/substitution sequence is proposed.


Subject(s)
Amines/chemical synthesis , Lithium/chemistry , Sparteine/chemistry , Amines/chemistry , Crystallography, X-Ray , Indicators and Reagents , Molecular Conformation , Stereoisomerism , Titanium/chemistry
18.
Phytopathology ; 93(12): 1471-7, 2003 Dec.
Article in English | MEDLINE | ID: mdl-18943610

ABSTRACT

ABSTRACT Sphaeropsis sapinea is the causal agent of Sphaeropsis tip blight disease of pines. Past surveys of diseased and symptomless Austrian and Scots pines revealed that latent infections of symptomless shoots by S. sapinea are common. The role of these latent infections in the tip blight disease is unknown. A sampling technique and nested-polymerase chain reaction (PCR) protocol were developed to detect latent S. sapinea in symptomless pine shoots. The sampling protocol was designed to be minimally destructive to the shoot so it could be preserved for further studies. The primers that were developed were specific for S. sapinea DNA and did not amplify DNA from any of 13 other endophytic fungal species that were commonly isolated from symptomless pine shoots. The PCR primers also amplified DNA of Botryosphaeria obtusa, which was, however, rare in symptomless Austrian pine tissues. The protocol detected as little as 0.93 pg of S. sapinea DNA in terminal bud samples and 10.4 pg of DNA in bark samples. Correlation (chi-square) analyses indicated that the nested-PCR protocol detected latent S. sapinea infections in both bud and bark samples with an efficiency that was statistically equivalent to isolating the fungus from the tissue. The nested-PCR protocol will make it possible to more quickly identify latent S. sapinea infections in symptomless pine shoots and should be useful in future studies of the latency phenomenon.

19.
Phytopathology ; 92(7): 803-12, 2002 Jul.
Article in English | MEDLINE | ID: mdl-18943278

ABSTRACT

ABSTRACT Observations were made of the ultrastructure of infection and colonization of leaves of a susceptible maize inbred by Colletotrichum graminicola and by a C. graminicola pathogenicity mutant. The mutant causes no symptoms on either maize leaves or stalks. Prior evidence suggested that it is deficient in production of signal peptidase, responsible for cleavage of signal peptides from proteins destined for transport through the endoplasmic reticulum. There was no significant difference in the process of infection or colonization by the mutant and wild-type strains up to 48 h after inoculation. Both the mutant and the wild type produced globose, melanized appressoria within 24 h after inoculation on the host surface. By 36 h, both strains had penetrated the host epidermal cells directly. The host cells frequently formed papillae in response to appressoria, but these were not usually successful in preventing fungal ingress in either case. Penetration was followed by formation of irregularly shaped, swollen infection hyphae. Infection hyphae of both strains grew biotrophically for a relatively short time (less than 12 h). One or more hyphal branches was produced from each infection hypha, and these invaded adjacent mesophyll cells. Both strains of the fungus grew cell-to-cell, setting up new biotrophic interactions in each cell, between 36 and 48 h after inoculation. Papillae were frequently formed by the mesophyll cells, but these were not successful in preventing fungal ingress. The first noticeable difference between the mutant and the wild type was related to their interaction with mesophyll cells. Cells invaded by the wild type died relatively quickly, whereas those infected by the mutant appeared to survive longer. The most dramatic difference between the mutant and wild type occurred when the mutant completely failed to make a transition to necrotrophic growth, while the wild type made that switch at 48 to 72 h after inoculation. The mutant may be unable to secrete sufficient quantities of one or more proteins that are necessary to support the switch between biotrophy and necrotrophy.

20.
Phytopathology ; 91(6): 558-64, 2001 Jun.
Article in English | MEDLINE | ID: mdl-18943944

ABSTRACT

ABSTRACT We investigated the relationship between physical characteristics of artificial surfaces, spore attachment, and spore germination in Colletotrichum graminicola. Surface hydrophobicity and surface rigidity were both signals for breaking dormancy and initiating spore germination, but spore attachment alone was not an important inducing signal. The presence of a carbon source overrode the necessity for a rigid, hydrophobic substrate for spore germination. Spore attachment was typically stronger to more hydrophobic surfaces, but certain hydrophilic surfaces also proved to be good substrates for spore attachment. In contrast to spore germination, appressorial induction was more dependent on attachment to a rigid substrate than it was on surface hydrophobicity. Appressoria were induced efficiently on hydrophilic surfaces, as long as there was significant conidial attachment to those surfaces.

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