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1.
J Chem Phys ; 148(8): 084302, 2018 Feb 28.
Article in English | MEDLINE | ID: mdl-29495790

ABSTRACT

We report an ab initio study of the low-lying valence and Rydberg states of HBr. The calculations are carried out employing the multireference single- and double-excitation configuration interaction method including the spin-orbit interaction. The first excited adiabatic potential of 1Σ+ symmetry presents two minima which correspond to the Rydberg E1Σ+ and valence V1Σ+ observed states. We calculate the vibrational levels of these two states using a coupled-channel treatment based on the two diabatic potentials deduced from the ab initio adiabatic potentials and the Rydberg-valence interaction. The chaotic energy separations between the observed levels are well reproduced in the calculations. We have also obtained for the first time theoretical data for numerous Rydberg states of HBr lying in the (66-79) × 103 cm-1 excitation energy interval. The calculated spectroscopic parameters are found to be in good agreement with experiment and provide a basis for future studies of radiative and non-radiative processes in the HBr molecule.

2.
J Chem Phys ; 144(14): 144302, 2016 Apr 14.
Article in English | MEDLINE | ID: mdl-27083716

ABSTRACT

We report an ab initio study of the quintet states of molecular oxygen. The calculations are carried out employing the multireference single and double excitation configuration interaction package. Potential energy curves of the six quintet valence states dissociating into ground state atoms and of the four quintet states dissociating to ion-pair atoms were computed. A number of bound quintet Rydberg series converging to the a(4)Πu and b(4)Σg(-) states of the O2(+) cation have been identified.

3.
J Chem Phys ; 140(16): 164303, 2014 Apr 28.
Article in English | MEDLINE | ID: mdl-24784266

ABSTRACT

A special case of predissociation, known as indirect or accidental predissociation observed in the Rydberg E(1)Π bound state of CO is discussed. We resort to ab initio potentials in order to determine the plausible mechanism for this predissociation. Values of the predissociation width for the valence k(3)Π state of CO, as obtained from Fermi's golden rule, are also reported. The predissociation width obtained for the mixed E(1)Π (v = 1, J = 7) state is 0.033 cm(-1) compared to the experimental value of 0.034 cm(-1). The mixed E - E(') state with J = 28, v = 0 is found to be in near resonance condition with the k(3)Π (v = 4, J = 28) state, thus providing the means to indirect predissociation.

4.
Antimicrob Agents Chemother ; 56(4): 2119-21, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22290962

ABSTRACT

During a ß-lactam resistance surveillance study, 12 IMP-18-positive Pseudomonas aeruginosa isolates belonging to 9 different pulsed-field gel electrophoresis groups were identified. In nine isolates, a class I integron with a novel gene array was identified that contained bla(IMP-18) and bla(OXA-224), while in two isolates the class I integron contained bla(IMP-18) and bla(OXA-2) but in a new arrangement. Our findings show the dissemination of two novel class I integrons in P. aeruginosa from different regions of Puerto Rico.


Subject(s)
Integrons/genetics , Pseudomonas Infections/microbiology , Pseudomonas aeruginosa/genetics , beta-Lactamases/genetics , Adult , Aged , Aged, 80 and over , Electrophoresis, Gel, Pulsed-Field , Female , Humans , Infant , Male , Microarray Analysis , Microbial Sensitivity Tests , Middle Aged , Molecular Sequence Data , Polymerase Chain Reaction , Pseudomonas aeruginosa/drug effects , Puerto Rico
5.
J Chem Phys ; 134(20): 204104, 2011 May 28.
Article in English | MEDLINE | ID: mdl-21639421

ABSTRACT

In this contribution we first report new ab initio self-consistent field configuration interaction calculations of the first excited adiabatic potential of (1)Σ(+) symmetry, the 2(1)Σ(+) or B(1)Σ(+) state, which presents two minima and can thus be seen as made up of the Rydberg E(1)Σ(+) and the valence V(1)Σ(+) states. Based on the computed 2(1)Σ(+) potential, we devised a theoretical procedure to compute the vibronic structure in order to try to explain the energy levels observed in the region above 76 254.4 cm(-1) which display an irregular vibrational structure, indicative of spectral perturbations. We try to find out which representation of the electronic states, the diabatic or the adiabatic one, is best suited to replicate the lowest observed vibronic levels of the E and V states. To this end, we deduce, from the 2(1)Σ(+) potential and its complementary adiabatic potential, two diabatic potentials. We then carry out a coupled equation treatment based on these diabatic potentials. The results of this treatment indicate that, in the present case, the adiabatic representation is better than the diabatic one to describe the observed vibronic levels. This is due, as expected, to the existence of a strong electrostatic interaction between the two diabatic potentials.

6.
J Chem Phys ; 132(2): 024311, 2010 Jan 14.
Article in English | MEDLINE | ID: mdl-20095678

ABSTRACT

The far-UV spectrum of carbon monoxide presents numerous abnormal (1)Pi rovibronic levels in the region 92,000-105,000 cm(-1) which have been observed by several experimentalists. Yet, and in spite of various attribution attempts carried out over the past two decades, the nature of these levels is poorly understood and they still lack a definitive assignment. The absorption lines in this energy region are characterized by irregular energy level positions and spacings, and odd, smaller than expected, rotational constants. In the current contribution we address this puzzle by relying on recent ab initio calculations of several Rydberg and valence states of CO [G. J. Vazquez, J. M. Amero, H. P. Liebermann, and H. Lefebvre-Brion, J. Phys. Chem. A 113, 13395 (2009)], and on further new calculations in which we compute electronic transition moments between the ground state and several excited (1)Pi states. We focus on the perturbations between the adiabatic (1)Pi states, specifically on the interaction between the second and third potential energy curves, reported in our previous paper. The second adiabatic potential energy curve, which we refer to as E-E('), displays a distorted shape with two minima as a result of an avoided crossing with the third one. We report here the computation of the lowest vibronic levels of a system of two electronic states which undergo a strong Rydberg-valence interaction. Our vibronic calculations proceed as follows: from the second and third computed adiabatic curves we first obtain approximate diabatic curves for the (X (2)Sigma(+))3ppi E (1)Pi Rydberg state and for the valence E(') (1)Pi state. Then we solve a system of 2x2 coupled equations in order to obtain the perturbed vibronic energy levels and wave functions for the interacting E and E(') states. The computed vibronic levels obtained from the coupled equation treatment are compared to the first six observed (1)Pi levels. A good agreement is found with experiment for the four lowest vibronic levels and a reasonable accord for two higher levels.

7.
J Phys Chem A ; 113(47): 13395-401, 2009 Nov 26.
Article in English | MEDLINE | ID: mdl-19757842

ABSTRACT

Ab initio potential energy curves of CO are calculated to address a number of problems remaining in the interpretation of the experimental VUV absorption spectra. The calculations are of the type SCF MRSD-CI. We employed the aug-cc-pVQZ basis set for both carbon and oxygen, augmented with twelve diffuse functions, of s-, p-, and d-type, located on both atomic centers. We focus on the energy region 85,000 cm(-1) < E < 110,000 cm(-1) characterized by strong interactions between Rydberg and valence states. In this work we deal specifically with the (1)Sigma(+), (1)Pi, and (3)Pi states lying in this region. Some of the relevant findings are as follows: The minimum of the C'(1)Sigma(+) valence state is found 1920 cm(-1) above the value inferred from an extrapolation of experimental data. A new (1)Pi valence state, labeled E', is found to perturb strongly the (X(2)Sigma(+))3ppi E(1)Pi Rydberg state. The electrostatic perturbation of the (X(2)Sigma(+))3ppi c(3)Pi Rydberg state by the k(3)Pi valence state is confirmed. The energy position of the (A(2)Pi)3ssigma (3)Pi state, the triplet companion of the W(1)Pi Rydberg state, is predicted.

9.
J Parasitol ; 69(2): 277-9, 1983 Apr.
Article in English | MEDLINE | ID: mdl-6854469

ABSTRACT

Eggs of Schistosoma mansoni and livers with numerous granulomata were preserved at -70 C in 1.7% salt solution plus an equal volume of water-soluble jelly. The eggs were suitable for circumoval tests after at least 1 yr of preservation and the livers supplied adequate eggs for the tests for at least 6 mo after preservation. This procedure may be useful where such storage facilities are available, and the COP test is used for diagnosis.


Subject(s)
Liver/parasitology , Precipitin Tests , Preservation, Biological , Schistosoma mansoni/physiology , Schistosomiasis/diagnosis , Animals , Cold Temperature , Female , Freezing , Ovum/immunology , Time Factors
10.
P R Health Sci J ; 18(2): 99-103, 1999 Jun.
Article in English | MEDLINE | ID: mdl-10461315

ABSTRACT

Malaria is no longer endemic in Puerto Rico, however, imported cases of the disease are occasionally reported to the Health Department of the Island. This is a report of a 45-year-old female patient who traveled to Kenya and Niger and was admitted to a San Juan area hospital with an 8 day history of daily chills and fever, myalgia, nausea and vomiting. Upon admission, peripheral blood displayed multiple intra-erythrocytic ring-shape trophozoites, highly suggestive of Plasmodium falciparum. The polymerase chain reaction was used as a complementary method for the detection of malaria parasites and confirmation of post-treatment parasite clearance. This report presents an imported case of malaria in Puerto Rico and showed the use of a molecular technique to diagnose Plasmodium.


Subject(s)
Malaria, Falciparum/diagnosis , Polymerase Chain Reaction , Travel , Animals , Base Sequence , Blood/parasitology , DNA, Protozoan/analysis , Electrophoresis, Agar Gel , Female , Humans , Malaria, Falciparum/parasitology , Middle Aged , Molecular Sequence Data , Plasmodium falciparum/genetics , Plasmodium falciparum/isolation & purification
11.
Rev Argent Microbiol ; 28(3): 118-22, 1996.
Article in Spanish | MEDLINE | ID: mdl-9026821

ABSTRACT

Bacillus megaterium accumulates poly-(3-hydroxybutyrate) (PHB) as a reserve material in intracellular granules. In this work we described a method for the preparation of PHB granules from B. megaterium PV447 and the analysis by polyacrylamide gel electrophoresis of the associated proteins. By comparison with another species a function is proposed for some of these proteins.


Subject(s)
Bacillus megaterium/chemistry , Bacterial Proteins/isolation & purification , Cytoplasmic Granules/chemistry , Hydroxybutyrates/analysis , Plant Lectins , Polyesters/analysis , Acyltransferases/isolation & purification , Bacillus megaterium/enzymology , Bacillus megaterium/ultrastructure , Cell Fractionation , Chromatium/enzymology , Electrophoresis, Polyacrylamide Gel , Lectins/isolation & purification , Species Specificity
13.
J Chem Phys ; 126(16): 164302, 2007 Apr 28.
Article in English | MEDLINE | ID: mdl-17477597

ABSTRACT

Ab initio electronic structure calculations of a relatively large number of Rydberg states of the CH radical were carried out employing the multireference single and double excitation configuration interaction (MRD-CI) method. A Gaussian basis set of cc-pV5Z quality augmented with 12 diffuse functions was used together with an extensive treatment of electron correlation. The main focus of this contribution is to investigate the 3d Rydberg complex assigned by Watson [Astrophys. J. 555, 472 (2001)] to three unidentified interstellar bands. The authors' calculations reproduce quite well the absolute excitation energies of the three components of the 3d complex, i.e., 2Sigma+(3dsigma), 2Pi(3dpi), and 2Delta(3ddelta), but not the energy ordering inferred from a rotational assignment of the 3d<--X 2Pi laboratory spectrum. The computation of the 4d complex is reported for the first time along with a number of other higher lying Rydberg species with an X 1Sigma+ core. The lowest Rydberg states belonging to series converging to the a 3Pi and A 1Pi excited states of CH+ are also calculated.

14.
Antimicrob Agents Chemother ; 17(2): 280-5, 1980 Feb.
Article in English | MEDLINE | ID: mdl-7387148

ABSTRACT

Endocarditis was produced in rabbits with a methicillin-resistant Staphylococcus epidermidis isolate. Subpopulations resistant to other semisynthetic penicillins and cephalosporins were detected in the isolate. Their presence was probably responsible for the increase in minimum bactericidal concentrations and minimum inhibitory concentrations when tests with high inocula, rather than low inocula were pursued. Rabbits were treated for either 2 or 7 days with nafcillin, cephalothin, cefamandole, vancomycin, rifampin, or gentamicin. Spontaneous death was uncommon in either controls (84% survival) or treated animals (80 to 94% survival). There was no significant difference in the number of bacteria in vegetations of rabbits treated for 7 days with cephalothin, cefamandole, nafcillin, or no antibiotic (control). There was a significant reduction in total bacteria in vegetations of rabbits given vancomycin, gentamicin, or rifampin for 7 days as compared with cephalothin, cefamandole, nafcillin or control. Gentamicin or rifampin sterilized significantly more vegetations after 7 days than cephalothin, cefamandole, nafcillin, or control; rifampin was more effective in sterilizing vegetations than either gentamycin or vancomycin after 2 days. Mutants resistant to 10 mug of rifampin per ml comprised the total bacterial population cultured from vegetations of 2 of 17 rabbits treated with this antibiotic for 7 days; there was no change in the susceptibility of vegetation isolates to other antibiotics. Rifampin, vancomycin, or gentamicin may prove to be more effective in humans than cephalosporins or semisynthetic penicillins in the treatment of methicillin-resistant S. epidermidis endocarditis.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Endocarditis, Bacterial/drug therapy , Staphylococcal Infections/drug therapy , Animals , Drug Resistance, Microbial , Endocarditis, Bacterial/microbiology , Microbial Sensitivity Tests , Rabbits , Staphylococcus/drug effects
15.
Curr Microbiol ; 42(5): 345-9, 2001 May.
Article in English | MEDLINE | ID: mdl-11400055

ABSTRACT

The molecular analysis of a genomic region of B. megaterium revealed the presence of a gene coding for the enzyme phosphotransbutyrylase (Ptb). The enzyme activity was measured throughout the different phases of growth in B. megaterium, and its activity was found to be maximal in the late exponential growth phase. The branched amino acids isoleucine and valine activated Ptb expression. PtbBm was capable of using butyryl-CoA and 2-methyl-propionyl CoA as substrates. ActBm, a final sigma54 regulator from B. megaterium whose gene is situated upstream from the ptb gene, activated its expression.


Subject(s)
Bacillus megaterium/enzymology , Bacillus megaterium/growth & development , DNA-Binding Proteins , Gene Expression Regulation, Bacterial , Phosphate Acetyltransferase/genetics , Phosphate Acetyltransferase/metabolism , Amino Acids, Branched-Chain/pharmacology , Bacillus megaterium/genetics , Culture Media/chemistry , DNA-Directed RNA Polymerases/metabolism , Kinetics , RNA Polymerase Sigma 54 , Sigma Factor/metabolism
16.
J Infect Dis ; 142(5): 725-31, 1980 Nov.
Article in English | MEDLINE | ID: mdl-7462687

ABSTRACT

Antibiotic prophylaxis for the prevention of endocarditis due to methicillin-resistant Staphylococcus epidermidis (MRSE) was evaluated in a modified rabbit endocarditis model and compared with results obtained with methicillin-sensitive S. epidermidis (MSSE). One dose of nafcillin, cefamandole, cephalothin, or vancomycin neither prevented endocarditis nor sterilized the blood of rabbits challenged with each of two MRSE or two MSSE isolates. One dose of gentamicin protected greater than or equal to 80% of animals challenged with three of the four isolates, and one dose of rifampin protected greater than or equal to 90% challenged with any of the four isolates. Multiple doses of any of the antibiotics prevented endocarditis in greater than or equal to 80% of rabbits challenged with MSSE, and four doses of vancomycin protected rabbits challenged with MRSE. However, MRSE endocarditis was prevented in less than or equal to 25% of animals given six doses of nafcillin or cephalosporins. Thus, nafcillin and cephalosporins were ineffective prophylaxis for MRSE endocarditis, whereas vancomycin, gentamicin, and rifampin were effective.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Endocarditis, Bacterial/prevention & control , Staphylococcal Infections/prevention & control , Animals , Cefamandole/therapeutic use , Cephalothin/therapeutic use , Female , Gentamicins/therapeutic use , Male , Methicillin/pharmacology , Nafcillin/therapeutic use , Penicillin Resistance , Rabbits , Rifampin/therapeutic use , Staphylococcus/drug effects , Vancomycin/therapeutic use
17.
Rev Infect Dis ; 5 Suppl 3: S538-42, 1983.
Article in English | MEDLINE | ID: mdl-6556710

ABSTRACT

Rifampin in combination with other antibiotics has been used successfully in the treatment of serious infections due to Staphylococcus epidermidis. The authors evaluated the efficacy of rifampin in combination with either cephalothin, nafcillin, gentamicin, or vancomycin to determine in vitro synergistic or antagonistic interactions of the combinations and to determine the role of the second antibiotic in preventing the emergence of rifampin-resistant mutants. The authors found that among 10 isolates of methicillin-resistant S. epidermidis, synergy was found in checkerboard studies (inoculum, 10(5) colony-forming units/ml) for only two isolates and only with nafcillin and rifampin; antagonism was present with one combination for each of four different isolates. Time-kill studies showed each antibiotic capable of preventing the emergence of rifampin-resistant mutants for all 10 isolates, but no synergy or antagonism was present. In experimental endocarditis, however, the addition of cephalothin did not prevent the emergence of rifampin-resistant mutants, and rifampin-resistant mutants were as capable of causing endocarditis as were their rifampin-sensitive parents. Thus, rifampin was a bactericidal antibiotic against methicillin-resistant S. epidermidis. The benefit of a second antibiotic in vitro was the prevention of the emergence of rifampin-resistant mutants. However, in vivo results with a beta-lactam antibiotic did not confirm in vitro observations. More animal and human studies should be performed with antibiotic combinations including rifampin against methicillin-resistant S. epidermidis.


Subject(s)
Methicillin , Rifampin/therapeutic use , Staphylococcal Infections/drug therapy , Animals , Cephalothin/therapeutic use , Drug Therapy, Combination , Gentamicins/therapeutic use , Male , Penicillin Resistance , Rabbits , Staphylococcus epidermidis
18.
Appl Environ Microbiol ; 67(11): 5331-4, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11679365

ABSTRACT

Genes responsible for the synthesis of poly(3-hydroxybutyrate) (PHB) in Azotobacter sp. FA8 were cloned and analyzed. A PHB polymerase gene (phbC) was found downstream from genes coding for beta-ketothiolase (phbA) and acetoacetyl-coenzyme A reductase (phbB). A PHB synthase mutant was obtained by gene inactivation and used for genetic studies. The phbC gene from this strain was introduced into Ralstonia eutropha PHB-4 (phbC-negative mutant), and the recombinant accumulated PHB when either glucose or octanoate was used as a source of carbon, indicating that this PHB synthase cannot incorporate medium-chain-length hydroxyalkanoates into PHB.


Subject(s)
Acetyl-CoA C-Acyltransferase/genetics , Acyltransferases/genetics , Alcohol Oxidoreductases/genetics , Azotobacter/genetics , Hydroxybutyrates/metabolism , Polyesters/metabolism , Acetyl-CoA C-Acyltransferase/metabolism , Acyltransferases/metabolism , Alcohol Oxidoreductases/metabolism , Azotobacter/growth & development , Azotobacter/metabolism , Cloning, Molecular , Gene Deletion , Genes, Bacterial , Molecular Sequence Data , Sequence Analysis, DNA
19.
Appl Microbiol Biotechnol ; 49(6): 737-42, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9684307

ABSTRACT

A Bacillus megaterium genomic fragment, which encoded an activator homologous to sigma 54 regulators and which was capable of activating Escherichia coli ato genes in trans, was detected in a gene library of B. megaterium screened for beta-ketothiolase activity. The fragment presented only one complete open reading frame (ORF1), which encoded a protein of 398 amino acids. The recombinant plasmid complemented mutations in the Escherichia coli atoC regulatory gene. The constitutive expression of the E. coli ato operon mediated by ORF1 could be useful for the synthesis of polyhydroxyalkanoates with different flexibility properties by recombinant E. coli strains.


Subject(s)
Bacillus megaterium/physiology , Escherichia coli/genetics , Genes, Bacterial , Polyesters/metabolism , Transcriptional Activation , Amino Acid Sequence , Escherichia coli/metabolism , Gene Expression Regulation, Bacterial , Molecular Sequence Data , Open Reading Frames , Plasmids/genetics , Sequence Alignment , Sequence Homology, Amino Acid
20.
Clin Infect Dis ; 31(4): 1084-92, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11049793

ABSTRACT

To evaluate the efficacy of paromomycin for the treatment of symptomatic cryptosporidial enteritis in human immunodeficiency virus-infected adults, we conducted a prospective, randomized, double-blind, placebo-controlled trial before the widespread introduction of highly active antiretroviral therapy (HAART). Seven units under the auspices of the AIDS Clinical Trials Group enrolled 35 adults with CD4 cell counts of < or = 150/mm(3). Initially, 17 patients received paromomycin (500 mg 4 times daily) and 18 received matching placebo for 21 days. Then all patients received paromomycin (500 mg q.i.d.) for an additional 21 days. Clinical definitions of response were measured by an average number of bowel movements per day in association with concurrent need for antidiarrheal agents that was lower than that before study entry. There was no treatment response during the placebo-controlled phase of the study according to protocol-defined criteria (P=.88). Three paromomycin recipients (17.6%) versus 2 placebo recipients (14.3%) responded completely. Rates of combined partial and complete responses in the paromomycin arm (8 out of 17, 47.1%) and the placebo arm (5 out of 14, 35.7%) of the study were also similar (P=.72). The clinical course of cryptosporidiosis was quite variable. Paromomycin was not shown to be more effective than placebo for the treatment of symptomatic cryptosporidial enteritis. However, inadequate statistical power prevents definitive rejection of the usefulness of paromomycin as therapy for this infection.


Subject(s)
AIDS-Related Opportunistic Infections/complications , AIDS-Related Opportunistic Infections/drug therapy , Amebicides/therapeutic use , Cryptosporidiosis/complications , Cryptosporidiosis/drug therapy , Cryptosporidium parvum , Paromomycin/therapeutic use , AIDS-Related Opportunistic Infections/immunology , Adult , Animals , CD4 Lymphocyte Count , Cryptosporidiosis/immunology , Cryptosporidium parvum/isolation & purification , Diarrhea/complications , Diarrhea/drug therapy , Double-Blind Method , Feces/parasitology , Female , Humans , Male , Prospective Studies
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