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1.
Diabetes Obes Metab ; 26(6): 2412-2421, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38558508

ABSTRACT

AIM: To evaluate the equivalence of immunogenicity, safety and efficacy of Gan & Lee (GL) Glargine (Basalin®; Gan & Lee Pharmaceutical) with that of the reference product (Lantus®) in adult participants with type 2 diabetes mellitus. METHODS: This was a phase 3, multicenter, open-label, equivalence trial conducted across 57 sites. In total, 567 participants with type 2 diabetes mellitus were randomized in a 1:1 ratio to undergo treatment with either GL Glargine or Lantus® for 26 weeks. The primary endpoint was the proportion of participants in each treatment arm who manifested treatment-induced anti-insulin antibodies (AIA). Secondary endpoints included efficacy and safety metrics, changes in glycated haemoglobin levels, and a comparative assessment of adverse events. Results were analysed using an equivalence test comparing the limits of the 90% confidence interval (CI) for treatment-induced AIA development to the prespecified margins. RESULTS: The percentages of participants positive for treatment-induced glycated haemoglobin by week 26 were similar between the GL Glargine (19.2%) and Lantus® (21.3%) treatment groups, with a treatment difference of -2.1 percentage points and a 90% CI (-7.6%, 3.5%) (predefined similarity margins: -10.7%, 10.7%). The difference in glycated haemoglobin was -0.08% (90% CI, -0.23, 0.06). The overall percentage of participants with any treatment-emergent adverse events was similar between the GL Glargine (80.1%) and Lantus® (81.6%) treatment groups. CONCLUSIONS: GL Glargine was similar to Lantus® in terms of immunogenicity, efficacy, and safety, based on the current study.


Subject(s)
Biosimilar Pharmaceuticals , Diabetes Mellitus, Type 2 , Glycated Hemoglobin , Hypoglycemic Agents , Insulin Glargine , Adult , Aged , Female , Humans , Male , Middle Aged , Biosimilar Pharmaceuticals/therapeutic use , Biosimilar Pharmaceuticals/adverse effects , Blood Glucose/drug effects , Blood Glucose/metabolism , Diabetes Mellitus, Type 2/drug therapy , Diabetes Mellitus, Type 2/blood , Diabetes Mellitus, Type 2/immunology , Glycated Hemoglobin/drug effects , Glycated Hemoglobin/metabolism , Glycated Hemoglobin/analysis , Hypoglycemia/chemically induced , Hypoglycemic Agents/therapeutic use , Hypoglycemic Agents/adverse effects , Insulin Antibodies/blood , Insulin Glargine/therapeutic use , Insulin Glargine/adverse effects , Therapeutic Equivalency , Treatment Outcome
2.
Chembiochem ; 24(23): e202300565, 2023 12 01.
Article in English | MEDLINE | ID: mdl-37737964

ABSTRACT

Proteins represent powerful biomacromolecules due to their unique functionality and broad utility both in the cell and in non-biological applications. The genetic encoding of non-canonical amino acids (ncAAs) facilitates functional diversification of these already powerful proteins. Specifically, ncAAs have been demonstrated to provide unique functional handles to bioorthogonally introduce novel functionality via conjugation reactions. Herein we examine the ability of a single ncAA to serve as a handle to generate multivalent bioconjugates to introduce two or more additional components to a protein, yielding a multivalent conjugate. To accomplish this aim, p-bromopropargyloxyphenyalanine (pBrPrF) was genetically encoded into both superfolder green fluorescent protein (sfGFP) and ubiquitin model proteins to serve as a conjugation handle. A sequential bioconjugation sequence involving a copper-assisted cycloaddition reaction coupled with a subsequent Sonogashira cross-coupling was then optimized. The linkage of two additional molecules to the model protein via these reactions yielded the desired multivalent bioconjugate. This domino approach using a single ncAA has a plethora of applications in both therapeutics and diagnostics as multiple unique moieties can be introduced into proteins in a highly controlled fashion.


Subject(s)
Amino Acids , Amino Acids/chemistry , Green Fluorescent Proteins/chemistry
3.
Prehosp Emerg Care ; 27(6): 838-840, 2023.
Article in English | MEDLINE | ID: mdl-37040305

ABSTRACT

Non-exertional heat stroke is defined as exposure to high outdoor temperatures, core body temperature >40 °C, and alteration of mentation. Early identification and treatment are imperative to reduce morbidity and mortality in these patients. Cold water immersion therapy is the most efficient and efficacious modality in treating heat stroke, yet it is rarely initiated in the prehospital setting. We outline a case of an 82-year-old man found unconscious outside during a regional heat wave with a temperature >107 °F. He was treated with cold water immersion using a body bag in the back of the ambulance and cooled to 104.1 °F during transport. During the 9-minute transport, the patient regained consciousness, followed basic commands, and answered basic questions. This case highlights the novel use of body bag cold water immersion as early initiation of treatment for heat stroke patients.


Subject(s)
Emergency Medical Services , Heat Stroke , Male , Humans , Aged, 80 and over , Exercise , Heat Stroke/therapy , Cold Temperature , Body Temperature , Water , Immersion
4.
Nucleic Acids Res ; 47(11): 5892-5905, 2019 06 20.
Article in English | MEDLINE | ID: mdl-30957850

ABSTRACT

The phenotypic adjustments of Mycobacterium tuberculosis are commonly inferred from the analysis of transcript abundance. While mechanisms of transcriptional regulation have been extensively analysed in mycobacteria, little is known about mechanisms that shape the transcriptome by regulating RNA decay rates. The aim of the present study is to identify the core components of the RNA degradosome of M. tuberculosis and to analyse their function in RNA metabolism. Using an approach involving cross-linking to 4-thiouridine-labelled RNA, we mapped the mycobacterial RNA-bound proteome and identified degradosome-related enzymes polynucleotide phosphorylase (PNPase), ATP-dependent RNA helicase (RhlE), ribonuclease E (RNase E) and ribonuclease J (RNase J) as major components. We then carried out affinity purification of eGFP-tagged recombinant constructs to identify protein-protein interactions. This identified further interactions with cold-shock proteins and novel KH-domain proteins. Engineering and transcriptional profiling of strains with a reduced level of expression of core degradosome ribonucleases provided evidence of important pleiotropic roles of the enzymes in mycobacterial RNA metabolism highlighting their potential vulnerability as drug targets.


Subject(s)
Mycobacterium tuberculosis/metabolism , Polyribonucleotide Nucleotidyltransferase/metabolism , RNA/analysis , DEAD-box RNA Helicases/metabolism , Endoribonucleases/metabolism , Escherichia coli/genetics , Escherichia coli Proteins/metabolism , Multienzyme Complexes , Mycobacterium smegmatis/metabolism , Polyribonucleotide Nucleotidyltransferase/genetics , Proteome , Proteomics , RNA/chemistry , RNA Helicases/metabolism , RNA Stability , RNA, Bacterial/metabolism , Ribonuclease III/metabolism , Ribonucleases/metabolism , Thiouridine/chemistry , Transcriptome
5.
Molecules ; 26(16)2021 Aug 21.
Article in English | MEDLINE | ID: mdl-34443661

ABSTRACT

Protein methyltransferases are vital to the epigenetic modification of gene expression. Thus, obtaining a better understanding of and control over the regulation of these crucial proteins has significant implications for the study and treatment of numerous diseases. One ideal mechanism of protein regulation is the specific installation of a photolabile-protecting group through the use of photocaged non-canonical amino acids. Consequently, PRMT1 was caged at a key tyrosine residue with a nitrobenzyl-protected Schultz amino acid to modulate protein function. Subsequent irradiation with UV light removes the caging group and restores normal methyltransferase activity, facilitating the spatial and temporal control of PRMT1 activity. Ultimately, this caged PRMT1 affords the ability to better understand the protein's mechanism of action and potentially regulate the epigenetic impacts of this vital protein.


Subject(s)
Epigenesis, Genetic/radiation effects , Protein Methyltransferases/genetics , Protein-Arginine N-Methyltransferases/genetics , Repressor Proteins/genetics , Amino Acid Sequence/genetics , Amino Acids , Epigenesis, Genetic/genetics , Gene Expression/radiation effects , Humans , Methylation/radiation effects , Protein Methyltransferases/radiation effects , Protein-Arginine N-Methyltransferases/radiation effects , Repressor Proteins/radiation effects , Transcription Factors/genetics , Tyrosine/chemistry , Ultraviolet Rays
6.
Chembiochem ; 21(3): 310-314, 2020 02 03.
Article in English | MEDLINE | ID: mdl-31298807

ABSTRACT

Protein bioconjugates have many critical applications, especially in the development of therapeutics. Consequently, the design of novel methodologies to prepare protein bioconjugates is of great importance. Herein we present the development and optimization of a novel strategy to prepare bioconjugates through a genetically encoded [2+2+2] cycloaddition reaction. To do this, a novel unnatural amino acid (UAA) containing a dipropargyl amine functionality was synthesized and incorporated site specifically. This UAA-containing protein was reacted with an alkyne-containing fluorophore to afford a covalently linked, well-defined protein bioconjugate. This reaction is convenient with an optimized reaction time of just two hours at room temperature and yields a stable, polysubstituted benzene ring. Overall, this work contributes a new bioconjugation strategy to the growing toolbox of reactions to develop protein bioconjugates, which have a myriad of applications.


Subject(s)
Alkynes/chemistry , Amines/chemistry , Amino Acids/chemistry , Proteins/chemistry , Proteins/genetics , Cycloaddition Reaction , Models, Molecular , Molecular Structure
7.
Nature ; 514(7523): 494-7, 2014 Oct 23.
Article in English | MEDLINE | ID: mdl-25141181

ABSTRACT

Modern strains of Mycobacterium tuberculosis from the Americas are closely related to those from Europe, supporting the assumption that human tuberculosis was introduced post-contact. This notion, however, is incompatible with archaeological evidence of pre-contact tuberculosis in the New World. Comparative genomics of modern isolates suggests that M. tuberculosis attained its worldwide distribution following human dispersals out of Africa during the Pleistocene epoch, although this has yet to be confirmed with ancient calibration points. Here we present three 1,000-year-old mycobacterial genomes from Peruvian human skeletons, revealing that a member of the M. tuberculosis complex caused human disease before contact. The ancient strains are distinct from known human-adapted forms and are most closely related to those adapted to seals and sea lions. Two independent dating approaches suggest a most recent common ancestor for the M. tuberculosis complex less than 6,000 years ago, which supports a Holocene dispersal of the disease. Our results implicate sea mammals as having played a role in transmitting the disease to humans across the ocean.


Subject(s)
Caniformia/microbiology , Genome, Bacterial/genetics , Mycobacterium tuberculosis/genetics , Tuberculosis/history , Tuberculosis/microbiology , Zoonoses/history , Zoonoses/microbiology , Animals , Bone and Bones/microbiology , Europe/ethnology , Genomics , History, Ancient , Human Migration/history , Humans , Peru , Phylogeny , Tuberculosis/transmission , Zoonoses/transmission
8.
Org Biomol Chem ; 17(13): 3396-3402, 2019 03 27.
Article in English | MEDLINE | ID: mdl-30869108

ABSTRACT

The Glaser-Hay bioconjugation has recently emerged as an efficient and attractive method to generate stable, useful bioconjugates with numerous applications, specifically in the field of therapeutics. Herein, we investigate the mechanism of the aqueous Glaser-Hay coupling to better understand optimization strategies. In doing so, it was identified that catalase is able to minimize protein oxidation and improve coupling efficiency, suggesting that hydrogen peroxide is produced during the aqueous Glaser-Hay bioconjugation. Further, several new ligands were investigated to minimize protein oxidation and maximize coupling efficiency. Finally, two novel strategies to streamline the Glaser-Hay bioconjugation and eliminate the need for secondary purification have been developed.


Subject(s)
Hydrogen Peroxide/metabolism , Proteins/metabolism , Hydrogen Peroxide/chemistry , Ligands , Molecular Structure , Oxidation-Reduction , Proteins/chemistry , Water/chemistry , Water/metabolism
9.
Bioorg Med Chem Lett ; 28(2): 81-84, 2018 01 15.
Article in English | MEDLINE | ID: mdl-29248298

ABSTRACT

The prevalence of 1,3-dipolar cycloadditions of azides and alkynes within both biology and chemistry highlights the utility of these reactions. However, the use of a copper catalyst can be prohibitive to some applications. Consequently, we have optimized a copper-free microwave-assisted reaction to alleviate the necessity for the copper catalyst. A small array of triazoles was prepared to examine the scope of this approach, and the methodology was translated to a protein context through the use of unnatural amino acids to demonstrate one of the first microwave-mediated bioconjugations involving a full length protein.


Subject(s)
Alkynes/chemistry , Azides/chemistry , Microwaves , Triazoles/chemical synthesis , Cycloaddition Reaction , Models, Molecular , Molecular Structure , Triazoles/chemistry
10.
Bioorg Chem ; 76: 326-331, 2018 02.
Article in English | MEDLINE | ID: mdl-29227916

ABSTRACT

The efficient preparation of protein bioconjugates represents a route to novel materials, diagnostics, and therapeutics. We previously reported a novel bioorthogonal Glaser-Hay reaction for the preparation of covalent linkages between proteins and a reaction partner; however, deleterious protein degradation was observed under extended reaction conditions. Herein, we describe the systematic optimization of the reaction to increase coupling efficiency and decrease protein degradation. Two optimized conditions were identified varying either the pH of the reaction or the bidentate ligand employed, allowing for more rapid conjugations and/or less protein oxidation.


Subject(s)
Alkynes/chemical synthesis , Chemistry Techniques, Synthetic/methods , Green Fluorescent Proteins/chemistry , Cell Line, Tumor , Copper/chemistry , Green Fluorescent Proteins/genetics , Humans , Iodides/chemistry , Ligands , Phenylalanine/analogs & derivatives , Phenylalanine/genetics , Rhodamines/chemical synthesis , Temperature
11.
Bioorg Med Chem Lett ; 27(1): 30-33, 2017 01 01.
Article in English | MEDLINE | ID: mdl-27894869

ABSTRACT

The ability to introduce or modify protein function has widespread application to multiple scientific disciplines. The introduction of unique unnatural amino acids represents an excellent mechanism to incorporate new functionality; however, this approach is limited by ability of the translational machinery to recognize and incorporate the chemical moiety. To overcome this potential limitation, we aimed to exploit the functionality of existing unnatural amino acids to perform bioorthogonal reactions to introduce the desired protein modification, altering its function. Specifically, via the introduction of a terminal alkyne containing unnatural amino acid, we demonstrated chemically programmable protein modification through the Glaser-Hay coupling to other terminal alkynes, altering the function of a protein. In a proof-of-concept experiment, this approach has been utilized to modify the fluorescence spectrum of green fluorescent protein.


Subject(s)
Alkynes/chemistry , Amino Acids/chemistry , Green Fluorescent Proteins/metabolism , Green Fluorescent Proteins/chemistry , Models, Molecular , Molecular Structure
12.
Molecules ; 22(7)2017 Jul 16.
Article in English | MEDLINE | ID: mdl-28714902

ABSTRACT

The ability to modulate protein function through minimal perturbations to amino acid structure represents an ideal mechanism to engineer optimized proteins. Due to the novel spectroscopic properties of green fluorescent protein, it has found widespread application as a reporter protein throughout the fields of biology and chemistry. Using site-specific amino acid mutagenesis, we have incorporated various fluorotyrosine residues directly into the fluorophore of the protein, altering the fluorescence and shifting the pKa of the phenolic proton associated with the fluorophore. Relative to wild type GFP, the fluorescence spectrum of the protein is altered with each additional fluorine atom, and the mutant GFPs have the potential to be employed as pH sensors due to the altered electronic properties of the fluorine atoms.


Subject(s)
Amino Acids/chemistry , Fluorescence , Green Fluorescent Proteins/chemistry , Biosensing Techniques , Fluorescent Dyes/chemistry , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Halogenation , Models, Molecular , Molecular Conformation , Mutation , Spectrometry, Fluorescence/methods
13.
J Org Chem ; 81(24): 12520-12524, 2016 12 16.
Article in English | MEDLINE | ID: mdl-27978730

ABSTRACT

The Glaser-Hay coupling of terminal alkynes is a useful synthetic reaction for the preparation of polyynes; however, chemoselectivity issues have precluded its widespread utilization. Conducting the reaction on a solid-support provides a mechanism to alleviate the chemoselectivity issues and provide products in high purities and yields. Moreover, the polyyne core is a key component to several natural products. Herein, we describe the application of a solid-supported Glaser-Hay reaction in the preparation of several natural products. These compounds were then screened for antibacterial activity, illustrating the utility of the methodology.


Subject(s)
Alkynes/chemistry , Biological Products/chemical synthesis , Carbon-13 Magnetic Resonance Spectroscopy , Catalysis , Mass Spectrometry , Proton Magnetic Resonance Spectroscopy
14.
Tetrahedron Lett ; 57(42): 4709-4712, 2016 Oct 19.
Article in English | MEDLINE | ID: mdl-28533567

ABSTRACT

Reversing a bioconjugation in a spatial and temporal fashion has widespread applications, especially toward targeted drug delivery. We report the synthesis and incorporation of an unnatural amino acid with an alkyne modified dimethoxy-ortho-nitrobenzyl caging group. This unnatural amino acid can be utilized in a Glaser-Hay conjugation to generate a bioconjugate, but also is able to disrupt the bioconjugate when irradiated with light. These combined features allow for the preparation of bioconjugates with a high degree of site-specificity and allow for the separation of the two components if necessary.

15.
Nucleic Acids Res ; 42(13): 8320-9, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24957601

ABSTRACT

Chromatin immunoprecipitation identified 191 binding sites of Mycobacterium tuberculosis cAMP receptor protein (CRP(Mt)) at endogenous expression levels using a specific α-CRP(Mt) antibody. Under these native conditions an equal distribution between intragenic and intergenic locations was observed. CRP(Mt) binding overlapped a palindromic consensus sequence. Analysis by RNA sequencing revealed widespread changes in transcriptional profile in a mutant strain lacking CRP(Mt) during exponential growth, and in response to nutrient starvation. Differential expression of genes with a CRP(Mt)-binding site represented only a minor portion of this transcriptional reprogramming with ∼ 19% of those representing transcriptional regulators potentially controlled by CRP(Mt). The subset of genes that are differentially expressed in the deletion mutant under both culture conditions conformed to a pattern resembling canonical CRP regulation in Escherichia coli, with binding close to the transcriptional start site associated with repression and upstream binding with activation. CRP(Mt) can function as a classical transcription factor in M. tuberculosis, though this occurs at only a subset of CRP(Mt)-binding sites.


Subject(s)
Bacterial Proteins/metabolism , Cyclic AMP Receptor Protein/metabolism , Gene Expression Regulation, Bacterial , Mycobacterium tuberculosis/genetics , Transcription Initiation Site , Binding Sites , Chromosome Mapping , Genome, Bacterial , Mycobacterium tuberculosis/metabolism , Transcription, Genetic
16.
Eur Respir J ; 45(2): 473-82, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25359354

ABSTRACT

Treatment of persons with latent tuberculosis (TB) infection at greatest risk of reactivation is an important component of TB control and elimination strategies. Biomarkers evaluating the effectiveness of treatment of latent TB infection have not yet been identified. This information would enhance control efforts and assist the evaluation of new treatment regimes. We designed a two-group, two-arm, randomised clinical study of tuberculin skin test-positive participants: 26 with documented contact with TB patients and 34 with non-documented contact. Participants in each group were randomly assigned to the immediate- or deferred-isoniazid treatment arms. Assays of in vitro interferon (IFN)-γ secretion in response to recombinant Rv1737 and overlapping synthetic peptide pools from various groups of immunodominant proteins were performed. During isoniazid therapy, a significant increase from baseline in the proportion of IFN-γ responders to the 10-kDa culture filtrate protein, Rv2031, Rv0849, Rv1986, Rv2659c, Rv2693c and the recombinant Rv1737 protein was observed (p⩽0.05). The peptide pool of Rv0849 and Rv1737 recombinant proteins induced the highest percentage of IFN-γ responders after isoniazid therapy. The in vitro IFN-γ responses to these proteins might represent useful markers to evaluate changes associated with treatment of latent TB infection.


Subject(s)
Antigens, Bacterial/chemistry , Bacterial Proteins/chemistry , Interferon-gamma/metabolism , Isoniazid/therapeutic use , Latent Tuberculosis/blood , Latent Tuberculosis/microbiology , Adolescent , Adult , Biomarkers/blood , Female , Humans , Hypoxia , Leukocytes, Mononuclear/cytology , Male , Mexico , Middle Aged , Peptides/chemistry , Protein Transport , Recombinant Proteins/chemistry , Tuberculin Test , Young Adult
17.
Bioconjug Chem ; 26(9): 1884-9, 2015 Sep 16.
Article in English | MEDLINE | ID: mdl-26287719

ABSTRACT

The utilization of unnatural amino acids (UAAs) in bioconjugations is ideal due to their ability to confer a degree of bioorthogonality and specificity. In order to elucidate optimal conditions for the preparation of bioconjugates with UAAs, we synthesized 9 UAAs with variable methylene tethers (2-4) and either an azide, alkyne, or halide functional group. All 9 UAAs were then incorporated into green fluorescent protein (GFP) using a promiscuous aminoacyl-tRNA synthetase. The different bioconjugations were then analyzed for optimal tether length via reaction with either a fluorophore or a derivatized resin. Interestingly, the optimal tether length was found to be dependent on the type of reaction. Overall, these findings provide a better understanding of various parameters that can be optimized for the efficient preparation of bioconjugates.


Subject(s)
Amino Acids/chemistry , Amino Acids/chemical synthesis , Green Fluorescent Proteins/chemistry , Alkynes/chemistry , Azides/chemistry , Chemistry Techniques, Synthetic , Halogens/chemistry , Models, Molecular , Protein Structure, Secondary
18.
J Sex Med ; 12(12): 2401-12, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26597311

ABSTRACT

INTRODUCTION: Previous data have shown that intravaginal dehydroepiandrosterone (DHEA, prasterone) improved all the domains of sexual function, an effect most likely related to the local formation of androgens from DHEA. AIMS: To confirm in a placebo-controlled, prospective, double-blind and randomized study the benefits of daily intravaginal DHEA for 12 weeks on sexual function using the Female Sexual Function Index (FSFI) questionnaire. METHODS: Placebo was administered daily to 157 women while 325 women received 0.50% (6.5 mg) DHEA daily for 12 weeks. All women were postmenopausal meeting the criteria of vulvovaginal atrophy (VVA), namely moderate to severe dyspareunia as their most bothersome symptom of VVA in addition to having ≤5% of vaginal superficial cells and vaginal pH > 5.0. The FSFI questionnaire was filled at baseline (screening and day 1), 6 weeks and 12 weeks. Comparison between DHEA and placebo of the changes from baseline to 12 weeks was made using the analysis of covariance test, with treatment group as the main factor and baseline value as the covariate. MAIN OUTCOME MEASURES: The six domains and total score of the FSFI questionnaire were evaluated. RESULTS: The FSFI domain desire increased over placebo by 0.24 unit (+49.0%, P = 0.0105), arousal by 0.42 unit (+56.8%, P = 0.0022), lubrication by 0.57 unit (+36.1%, P = 0.0005), orgasm by 0.32 unit (+33.0%, P = 0.047), satisfaction by 0.44 unit (+48.3%, P = 0.0012), and pain at sexual activity by 0.62 unit (+39.2%, P = 0.001). The total FSFI score, on the other hand, has shown a superiority of 2.59 units in the DHEA group over placebo or a 41.3% greater change than placebo (P = 0.0006 over placebo). CONCLUSION: The present data show that all the six domains of the FSFI are improved over placebo (from P = 0.047 to 0.0005), thus confirming the previously observed benefits of intravaginal DHEA on female sexual dysfunction by an action exerted exclusively at the level of the vagina, in the absence of biologically significant changes of serum steroids levels.


Subject(s)
Dehydroepiandrosterone/administration & dosage , Dyspareunia/drug therapy , Vagina/drug effects , Vagina/pathology , Vulva/drug effects , Vulva/pathology , Administration, Intravaginal , Adult , Aged , Atrophy , Double-Blind Method , Dyspareunia/etiology , Dyspareunia/psychology , Female , Humans , Middle Aged , Orgasm , Personal Satisfaction , Postmenopause/drug effects , Prospective Studies , Surveys and Questionnaires
19.
Bioorg Med Chem Lett ; 25(3): 470-3, 2015 Feb 01.
Article in English | MEDLINE | ID: mdl-25563892

ABSTRACT

The incorporation of unnatural amino acids represents a unique mechanism for the modulation of protein function. This approach has been utilized to generate photoswitchable GFP mutants, capable of demonstrating modulated fluorescence upon exposure to UV irradiation. Overall these photosensitive GFP mutants can be employed in various biosensing and diagnostic techniques to better understand protein function and processing.


Subject(s)
Amino Acids/metabolism , Azo Compounds/chemistry , Green Fluorescent Proteins/metabolism , Amino Acids/chemistry , Escherichia coli/metabolism , Green Fluorescent Proteins/chemistry , Green Fluorescent Proteins/genetics , Protein Engineering , Protein Structure, Tertiary , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Spectrometry, Fluorescence , Ultraviolet Rays
20.
Bioorg Med Chem Lett ; 25(22): 5277-80, 2015 Nov 15.
Article in English | MEDLINE | ID: mdl-26421994

ABSTRACT

The site-specific incorporation of unnatural amino acids into proteins has a wide range of biological implications. Of particular interest is the incorporation of fluorescent probes as a mechanism to track protein function, transport, and folding. Thus, the development of a novel system for the incorporation of new fluorescent unnatural amino acids has significant utility. Specifically, we have elucidated an aminoacyl-tRNA synthetase capable of recognizing a terphenyl UAA derivative, and charging a cognate tRNA with this amino acid for protein incorporation. Moreover, we have successfully incorporated this fluorescent UAA into GFP at several key residues, demonstrating a novel means to modulate fluorescence within the protein.


Subject(s)
Amino Acyl-tRNA Synthetases/metabolism , Biphenyl Compounds/chemical synthesis , Fluorescent Dyes/chemical synthesis , Green Fluorescent Proteins/metabolism , Phenylalanine/analogs & derivatives , Terphenyl Compounds/chemical synthesis , Amino Acid Substitution , Amino Acyl-tRNA Synthetases/genetics , Biphenyl Compounds/metabolism , Escherichia coli , Fluorescent Dyes/metabolism , Green Fluorescent Proteins/genetics , Mutagenesis, Site-Directed , Mutation , Phenylalanine/chemical synthesis , Phenylalanine/metabolism , Protein Structure, Tertiary , Terphenyl Compounds/metabolism
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