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1.
Mar Pollut Bull ; 200: 116111, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38325198

ABSTRACT

Eight heavy metal concentrations were analyzed from a 60.35-m-long sediment core in the Jiangsu intertidal area, China. Based on the lithofacies characteristics, mean grain size, downcore distributions of elements, and accelerator mass spectrometry (AMS) 14C and optically stimulated luminescence (OSL) data, the sediments in the core were divided into three units that formed during marine isotope stages 4 (MIS 4), MIS 3, and MIS 1. Except for Cd, all the other heavy metals had the lowest average concentrations in U3, which formed during MIS 4 with the coarsest sediment, representing a fluvial deposit. Most of the heavy metals were positively correlated with Al, Fe, and the total organic carbon (TOC), indicating these metals had the same sources. Pearson's correlation coefficient, enrichment factor, geoaccumulation index, and principal component analysis suggested that there was no element enrichment or contamination in the core sediments and that all heavy metals were naturally sourced.


Subject(s)
Metals, Heavy , Water Pollutants, Chemical , Geologic Sediments/chemistry , Water Pollutants, Chemical/analysis , Environmental Monitoring/methods , Metals, Heavy/analysis , China , Risk Assessment
2.
BMC Med Genomics ; 13(1): 145, 2020 10 06.
Article in English | MEDLINE | ID: mdl-33023625

ABSTRACT

BACKGROUND: Identification of master regulators (MRs) using transcriptome data in cervical cancer (CC) could help us to develop biomarkers and find novel drug targets to fight this disease. METHODS: We performed differential expression (DE) analyses of public microarray and RNA-seq transcriptome data of CC and normal cervical tissues (N). Virtual Inference of Protein activity by Enriched Regulon analysis (VIPER) was used to convert the DE outcomes to differential activity (DA) signature for MRs. Synergy analysis was conducted to study synergistic effect of MR-pairs. TCGA and microarray data were used to test the association of expression of a MR and a clinical feature or a molecular feature (e.g. somatic mutations). Various bioinformatic tools/websites (DAVID, GEPIA2, Oncomine, cBioPortal) were used to analyze the expression of the top MRs and their regulons. RESULTS: Ten DE and 10 DA signatures were generated for CC. Two MRs, DNA topoisomerase II alpha (TOP2A) and centromere protein F (CENPF) were found to be up-regulated, activated and synergistic in CC compared to N across the 10 datasets. The two MRs activate a common set of genes (regulons) with functions in cell cycle, chromosome, DNA damage etc. Higher expression of CENPF was associated with metastasis. High expression of both MRs is associated with somatic mutation of a set of genes including tumor suppressors (TP53, MSH2, RB1) and genes involved in cancer pathways, cell cycle, DNA damage and repair. The magnitude of up-regulation and the absolute expression level of both MRs in CC are significantly higher compared to many other cancer types. CONCLUSION: TOP2A and CENPF are a synergistic pair of MRs that are overexpressed and activated in CC. Their high expression is correlated with some prognosis features (e.g. metastasis) and molecular features (e.g. somatic mutations) and distinctly high in CC vs. many other cancer types. They may be good biomarkers and anticancer drug targets for CC.


Subject(s)
Biomarkers, Tumor/genetics , Chromosomal Proteins, Non-Histone/genetics , DNA Topoisomerases, Type II/genetics , Gene Expression Regulation, Neoplastic , Gene Regulatory Networks , Microfilament Proteins/genetics , Poly-ADP-Ribose Binding Proteins/genetics , Uterine Cervical Neoplasms/genetics , Uterine Cervical Neoplasms/pathology , Computational Biology , Female , Gene Expression Profiling , Humans
3.
Cancer Manag Res ; 11: 5857-5869, 2019.
Article in English | MEDLINE | ID: mdl-31303792

ABSTRACT

Objective: This study aimed to investigate the feasibility of utilizing CytoSorter® system to detect circulating tumor cells (CTCs) and clinical value of CTCs in patients with locally advanced head and neck squamous cell carcinoma (LAHNSCC). Methods: 31 patients with LAHNSCC, 12 healthy volunteers, and 6 patients with benign tumor serving as controls were enrolled in this study. CTCs were enriched with the CytoSorter®, a microfluidic based immune capture system. CTC detection was performed before and after induction chemotherapy, as well as after surgery and/or radiotherapy. Correlations between CTC enumerations at different time points and survival outcome and recurrence risk were evaluated. The correlation between CTCs and clinicopathological characteristics was appraised. Follow-up of patients continued until March 2019. Results: While CTCs were not found in the controls, they were detected in 24 of 31 LAHNSCC patients. CTCs could be used to distinguish diseased people from the healthy (P<0.0001). CTCs were statistically associated with patient age (P=0.037, >60 years old vs<60 years old) and lymph node metastasis (P= 0.034, N0N1 VS N2N3). Most patients had significantly reduced CTCs at the end of treatment. Patients with partial remission of tumor after induction therapy had more CTCs than those with complete remission of tumor. Patients with higher CTCs counts prior to treatment had higher chance of developing local recurrence of tumor after treatment (P=0.0187). Conclusion: CTCs were successfully isolated in LAHNSCC patients using CytoSorter® system with better sensibility. CTCs can be used to differentiate LAHNSCC patients from those with benign HNSCC tumor or healthy volunteers, and as markers to monitor patient's response to treatment and predict the local tumor recurrence after treatment. CTC detection at baseline has the greatest prognostic potency in LAHNSCC patients.

4.
Zhongguo Zhen Jiu ; 30(6): 478-80, 2010 Jun.
Article in Zh | MEDLINE | ID: mdl-20578386

ABSTRACT

OBJECTIVE: To observed the clinical efficacy on dry eye syndrome treated with acupuncture on the acupoints around the eyes. METHODS: Fifty-six cases of dry eye syndrome were divided into two groups, acupuncture group and western medicine group, 28 cases in each one. In acupuncture group, acupuncture was applied to Jingming (BL 1), Cuanzhu (BL 2), Sizhukong (TE 23), Tongziliao (GB 1), etc. In western medicine group, the topical artificial tear eye drops were administered. The corneal fluorescein staining, breaking-up time (BUT), tear volume and the symptom score were observed before and after treatment in two groups. RESULTS: In comparison before and after treatment in acupuncture group, the statistical significant difference presented in BUT, tear volume and the symptom score (all P < 0.01). In comparison before and after treatment in western medicine group, the statistical significant difference presented in corneal staining, BUT and the symptom score (P < 0.01). The improvements in BUT, tear volume and the symptom score in acupuncture group were superior to those in western medicine group (P < 0.01). CONCLUSION: Acupuncture on the acupoints around the eyes achieves a quite good efficacy on dry eye syndrome.


Subject(s)
Acupuncture Therapy , Dry Eye Syndromes/therapy , Acupuncture Points , Adult , Aged , Dry Eye Syndromes/metabolism , Female , Humans , Male , Middle Aged , Tears/metabolism , Young Adult
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