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1.
BMC Plant Biol ; 18(1): 130, 2018 Jun 25.
Article in English | MEDLINE | ID: mdl-29940850

ABSTRACT

BACKGROUND: Plastome mutants are ideal resources for elucidating the functions of plastid genes. Numerous studies have been conducted for the function of plastid genes in barley and tobacco; however, related information is limited in Chinese cabbage. RESULTS: A chlorophyll-deficient mutant of Chinese cabbage that was derived by ethyl methanesulfonate treatment on isolated microspores showed uniformly pale green inner leaves and slow growth compared with that shown by the wild type "Fukuda 50' ('FT'). Genetic analysis revealed that cdm was cytoplasmically inherited. Physiological and ultrastructural analyses of cdm showed impaired photosynthesis and abnormal chloroplast development. Utilizing next generation sequencing, the complete plastomes of cdm and 'FT' were respectively re-mapped to the reference genome of Chinese cabbage, and an A-to-C base substitution with a mutation ratio higher than 99% was detected. The missense mutation of plastid ribosomal protein S4 led to valine substitution for glycine at residue 193. The expression level of rps4 was analyzed using quantitative real-time PCR and found lower in than in 'FT'. RNA gel-blot assays showed that the abundance of mature 23S rRNA, 16S rRNA, 5S rRNA, and 4.5S rRNA significantly decreased and that the processing of 23S, 16S rRNA, and 4.5S rRNA was seriously impaired, affecting the ribosomal function in cdm. CONCLUSIONS: These findings indicated that cdm was a plastome mutant and that chlorophyll deficiency might be due to an A-to-C base substitution of the plastome-encoded rps4 that impaired the rRNA processing and affected the ribosomal function.


Subject(s)
Brassica/genetics , Chlorophyll/deficiency , Plant Proteins/genetics , Plastids/genetics , Blotting, Northern , Brassica/metabolism , Brassica/ultrastructure , Chlorophyll/genetics , Chlorophyll/metabolism , Chloroplasts/ultrastructure , DNA, Chloroplast/genetics , Genes, Plant/genetics , Genes, Plant/physiology , Microscopy, Electron, Transmission , Mitochondria/ultrastructure , Mutation, Missense/genetics , Photosynthesis/genetics , Plant Proteins/metabolism , Plant Proteins/physiology , RNA, Ribosomal/genetics , Real-Time Polymerase Chain Reaction , Sequence Analysis, DNA
2.
New Phytol ; 217(2): 828-835, 2018 01.
Article in English | MEDLINE | ID: mdl-29120037

ABSTRACT

The seeds of most heterotrophic plants, commonly referred to as dust seeds, are typically dispersed in the air like dust particles. Therefore, little attention has been paid to how seeds of heterotrophic plants are dispersed, owing to the notion that wind dispersal is the dominant strategy. However, inconspicuous but fleshy, indehiscent fruit can be observed in distantly related plants that have independently evolved full heterotrophy. Here I investigated the seed dispersal system in three unrelated fully heterotrophic plants with fleshy, indehiscent fruits (Yoania amagiensis, Monotropastrum humile and Phacellanthus tubiflorus) by direct observation, a differential exclusion experiment of fruit feeders and investigation on seed viability through the digestive tract. The present study revealed that camel crickets are the major seed disperser in three achlorophyllous plants in the study population. This represents the first evidence of seed dispersal by camel crickets in any angiosperm species. These heterotrophic plants grow in the understorey of densely vegetated forests where wind is probably an ineffective seed dispersal agent. Life-history traits of the achlorophyllous plants associated with heterotrophic lifestyles, such as colonization of dark understorey habitats and dust seeds, could facilitate independent recruitment of the novel endozoochorous seed dispersal system by camel crickets.


Subject(s)
Chlorophyll/deficiency , Gryllidae/physiology , Magnoliopsida/physiology , Seed Dispersal/physiology , Animals , Feces , Feeding Behavior , Fruit/anatomy & histology , Magnoliopsida/anatomy & histology , Seeds , Species Specificity
3.
Plant Cell Environ ; 41(6): 1427-1437, 2018 06.
Article in English | MEDLINE | ID: mdl-29498070

ABSTRACT

The photosynthetic, optical, and morphological characteristics of a chlorophyll-deficient (Chl-deficient) "yellow" soybean mutant (MinnGold) were examined in comparison with 2 green varieties (MN0095 and Eiko). Despite the large difference in Chl content, similar leaf photosynthesis rates were maintained in the Chl-deficient mutant by offsetting the reduced absorption of red photons by a small increase in photochemical efficiency and lower non-photochemical quenching. When grown in the field, at full canopy cover, the mutants reflected a significantly larger proportion of incoming shortwave radiation, but the total canopy light absorption was only slightly reduced, most likely due to a deeper penetration of light into the canopy space. As a consequence, canopy-scale gross primary production and ecosystem respiration were comparable between the Chl-deficient mutant and the green variety. However, total biomass production was lower in the mutant, which indicates that processes other than steady state photosynthesis caused a reduction in biomass accumulation over time. Analysis of non-photochemical quenching relaxation and gas exchange in Chl-deficient and green leaves after transitions from high to low light conditions suggested that dynamic photosynthesis might be responsible for the reduced biomass production in the Chl-deficient mutant under field conditions.


Subject(s)
Chlorophyll/deficiency , Glycine max/genetics , Glycine max/physiology , Mutation/genetics , Photosynthesis , Plant Leaves/physiology , Biomass , Carbon Dioxide/metabolism , Oxygen/metabolism , Photons , Photosystem II Protein Complex/metabolism , Plant Transpiration , Glycine max/growth & development , Time Factors
4.
J Pineal Res ; 64(1)2018 Jan.
Article in English | MEDLINE | ID: mdl-29149482

ABSTRACT

Melatonin is involved in the regulation of carbohydrate metabolism and induction of cold tolerance in plants. The objective of this study was to investigate the roles of melatonin in modulation of carbon assimilation of wild-type wheat and the Chl b-deficient mutant ANK32B in response to elevated CO2 concentration ([CO2 ]) and the transgenerational effects of application of exogenous melatonin (hereafter identified as melatonin priming) on the cold tolerance in offspring. The results showed that the melatonin priming enhanced the carbon assimilation in ANK32B under elevated [CO2 ], via boosting the activities of ATPase and sucrose synthesis and maintaining a relatively higher level of total chlorophyll concentration in leaves. In addition, melatonin priming in maternal plants at grain filling promoted the seed germination in offspring by accelerating the starch degradation and improved the cold tolerance of seedlings through activating the antioxidant enzymes and enhancing the photosynthetic electron transport efficiency. These findings suggest the important roles of melatonin in plant response to future climate change, indicating that the melatonin priming at grain filling in maternal plants could be an effective approach to improve cold tolerance of wheat offspring at seedling stage.


Subject(s)
Chlorophyll/chemical synthesis , Chlorophyll/deficiency , Melatonin/pharmacology , Triticum/metabolism , Carbon/metabolism , Carbon Dioxide/metabolism , Chlorophyll/metabolism , Triticum/drug effects
5.
Photosynth Res ; 130(1-3): 251-266, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27023107

ABSTRACT

The effects of high temperature on CO2 assimilation rate, processes associated with photosynthetic electron and proton transport, as well as photoprotective responses, were studied in chlorophyll b-deficient mutant lines (ANK-32A and ANK-32B) and wild type (WT) of wheat (Triticum aestivum L.). Despite the low chlorophyll content and chlorophyll a-to-b ratio, the non-stressed mutant plants had the similar level of CO2 assimilation and photosynthetic responses as WT. However, in ANK mutant plants exposed to prolonged high temperature episode (42 °C for ~10 h), we observed lower CO2 assimilation compared to WT, especially when a high CO2 supply was provided. In all heat-exposed plants, we found approximately the same level of PSII photoinhibition, but the decrease in content of photooxidizable PSI was higher in ANK mutant plants compared to WT. The PSI damage can be well explained by the level of overreduction of PSI acceptor side observed in plants exposed to high temperature, which was, in turn, the result of the insufficient transthylakoid proton gradient associated with low non-photochemical quenching and lack of ability to downregulate the linear electron transport to keep the reduction state of PSI acceptor side low enough. Compared to WT, the ANK mutant lines had lower capacity to drive the cyclic electron transport around PSI in moderate and high light; it confirms the protective role of cyclic electron transport for the protection of PSI against photoinhibition. Our results, however, also suggest that the inactivation of PSI in heat stress conditions can be the protective mechanism against photooxidative damage of chloroplast and cell structures.


Subject(s)
Chlorophyll/metabolism , Triticum/metabolism , Carbon Dioxide/metabolism , Chlorophyll/deficiency , Hot Temperature , Mutation , Oxidation-Reduction , Photosynthesis , Photosystem II Protein Complex/metabolism
6.
Theor Appl Genet ; 129(10): 1961-73, 2016 Oct.
Article in English | MEDLINE | ID: mdl-27435733

ABSTRACT

KEY MESSAGE: The cucumber chlorophyll-deficient golden leaf mutation is due to a single nucleotide substitution in the CsChlI gene for magnesium chelatase I subunit which plays important roles in the chlorophyll biosynthesis pathway. The Mg-chelatase catalyzes the insertion of Mg(2+) into the protoporphyrin IX in the chlorophyll biosynthesis pathway, which is a protein complex encompassing three subunits CHLI, CHLD, and CHLH. Chlorophyll-deficient mutations in genes encoding the three subunits have played important roles in understanding the structure, function and regulation of this important enzyme. In an EMS mutagenesis population, we identified a chlorophyll-deficient mutant C528 with golden leaf color throughout its development which was viable and able to set fruits and seeds. Segregation analysis in multiple populations indicated that this leaf color mutation was recessively inherited and the green color showed complete dominance over golden color. Map-based cloning identified CsChlI as the candidate gene for this mutation which encoded the CHLI subunit of cucumber Mg-chelatase. The 1757-bp CsChlI gene had three exons and a single nucleotide change (G to A) in its third exon resulted in an amino acid substitution (G269R) and the golden leaf color in C528. This mutation occurred in the highly conserved nucleotide-binding domain of the CHLI protein in which chlorophyll-deficient mutations have been frequently identified. The mutant phenotype, CsChlI expression pattern and the mutated residue in the CHLI protein suggested the mutant allele in C528 is unique among mutations identified so far in different species. This golden leaf mutant not only has its potential in cucumber breeding, but also provides a useful tool in understanding the CHLI function and its regulation in the chlorophyll biosynthesis pathway as well as chloroplast development.


Subject(s)
Chlorophyll/deficiency , Cucumis sativus/genetics , Lyases/genetics , Amino Acid Sequence , Chromosome Mapping , Cucumis sativus/enzymology , DNA, Plant/genetics , Exons , Mutation , Nucleotides/genetics , Phenotype , Phylogeny , Plant Leaves/genetics , Sequence Alignment , Sequence Analysis, DNA
7.
Planta ; 235(5): 1023-33, 2012 May.
Article in English | MEDLINE | ID: mdl-22134781

ABSTRACT

Residual chlorophyll in chlorophyll-deficient (albino) areas of variegated leaves of Ficus benjamina originates from guard cell chloroplasts. Photosynthetic features of green and albino sectors of F. benjamina were studied by imaging the distribution of the fluorescence decrease ratio Rfd within a leaf calculated from maximum (Fm) and steady-state leaf chlorophyll fluorescence (Fs) at 690 and 740 nm. Local areas of albino sectors demonstrated an abnormally high Rfd(740)/Rfd(690) ratio. Fluorescence transients excited in albino sectors at red (640 and 690 nm) wavelengths showed an abrupt decrease of the Rfd values (0.4 and 0.1, correspondingly) as compared with those excited at blue wavelengths (1.7-2.4). This "Red Drop" was not observed for green sectors. Normal and chlorophyll-deficient leaf sectors of F. benjamina were also tested for linear and cyclic electron transport in thylakoids. The tests have been performed studying fluorescence at a steady-state phase with CO(2)-excess impulse feeding, photoacoustic signal generated by pulse light source at wavelengths selectively exciting PSI, fluorescence kinetics under anaerobiosis and fluorescence changes observed by dual-wavelength excitation method. The data obtained for albino sectors strongly suggest the possibility of a cyclic electron transport simultaneously occurring in guard cell thylakoids around photosystems I and II under blue light, whereas linear electron transport is absent or insufficient.


Subject(s)
Chlorophyll/deficiency , Chloroplasts/metabolism , Ficus/physiology , Plant Leaves/cytology , Plant Leaves/metabolism , Plant Stomata/physiology , Chlorophyll/metabolism , Electron Transport , Ficus/cytology , Fluorescence , Kinetics , Light , Photosynthesis , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Pigmentation , Thylakoids
8.
Yi Chuan ; 34(2): 223-9, 2012 Feb.
Article in Zh | MEDLINE | ID: mdl-22382064

ABSTRACT

A yellow-leaf mutant (yl11) with chlorophyll-deficient in rice (Oryza sativa L.) was selected from the progeny of a japonica rice variety "Jiahua 1" treated with 60Co γ-radiation. In comparison with the wild-type parent, "Jiahua 1", the mutant had yellow-leaves at whole growth stages and displayed significantly decreased in chlorophyll content and net photosynthetic rate. Underdeveloped chloroplast and alterations of the major agronomic traits, such as plant-heights, were also observed in the mutant. Genetic analysis confirmed that the yellow-leaf mutant trait was controlled by a single recessive nuclear gene (yl11). Using SSR and In/Del molecular markers and 920 F2 and F3 plants from the cross of yl11 with the indica variety Peiai 64S, the yl11 was mapped between the molecular markers MM2199 and InDel21039 with a physical distance of 110 kb on the long arm of chromosome 11, in which no known functional genes for chlorophyll synthesis or chloroplast development in rice has been found. These findings will provide a foundation for the cloning and functional analysis of this gene in the future.


Subject(s)
Chlorophyll/deficiency , Chromosome Mapping , Mutation , Oryza/genetics , Chlorophyll/biosynthesis
9.
New Phytol ; 189(3): 790-796, 2011 Feb.
Article in English | MEDLINE | ID: mdl-20964694

ABSTRACT

• Achlorophyllous variants of some forest orchids are known to reach almost the same size as their green forms. These vegetative albino forms cover their entire carbon (C) demand through fungi that simultaneously form ectomycorrhizae with trees, while green variants partially draw on C from photosynthesis and C from fungal hosts. Here, we investigate whether the amount of C derived from either source is proportional to leaf chlorophyll concentration. The discovery of two Cephalanthera damasonium populations with variegated leaves enabled a continuous bridging of leaf chlorophyll concentrations between green and albino forms. • Leaves of 27 green, variegated and albino individuals of C. damasonium were compared for chlorophyll concentrations, C sources (as characterized by (13)C abundances) and total C and nitrogen (N) concentrations. • We found a linear relationship between leaf chlorophyll concentrations and the proportional reliance on fungi as a C source. Furthermore, we show that the shift in C gain through mycoheterotrophic means significantly changes leaf total C and N concentrations. • Our results document that partial mycoheterotrophy in C. damasonium is not a static nutritional mode but a flexible mechanism related inter alia to leaf chlorophyll concentrations. The change in proportional reliance on fungi as a C source affects leaf chemical composition.


Subject(s)
Carbon/metabolism , Chlorophyll/analysis , Heterotrophic Processes/physiology , Mycorrhizae , Orchidaceae/metabolism , Photosynthesis , Plant Leaves/metabolism , Carbon Isotopes , Chlorophyll/deficiency , Nitrogen/metabolism , Orchidaceae/chemistry , Orchidaceae/physiology , Plant Leaves/chemistry , Plant Roots/microbiology , Trees
10.
Proc Natl Acad Sci U S A ; 105(10): 4050-5, 2008 Mar 11.
Article in English | MEDLINE | ID: mdl-18316743

ABSTRACT

Hyperspectral confocal fluorescence imaging provides the opportunity to obtain individual fluorescence emission spectra in small ( approximately 0.03-microm(3)) volumes. Using multivariate curve resolution, individual fluorescence components can be resolved, and their intensities can be calculated. Here we localize, in vivo, photosynthesis-related pigments (chlorophylls, phycobilins, and carotenoids) in wild-type and mutant cells of the cyanobacterium Synechocystis sp. PCC 6803. Cells were excited at 488 nm, exciting primarily phycobilins and carotenoids. Fluorescence from phycocyanin, allophycocyanin, allophycocyanin-B/terminal emitter, and chlorophyll a was resolved. Moreover, resonance-enhanced Raman signals and very weak fluorescence from carotenoids were observed. Phycobilin emission was most intense along the periphery of the cell whereas chlorophyll fluorescence was distributed more evenly throughout the cell, suggesting that fluorescing phycobilisomes are more prevalent along the outer thylakoids. Carotenoids were prevalent in the cell wall and also were present in thylakoids. Two chlorophyll fluorescence components were resolved: the short-wavelength component originates primarily from photosystem II and is most intense near the periphery of the cell; and the long-wavelength component that is attributed to photosystem I because it disappears in mutants lacking this photosystem is of higher relative intensity toward the inner rings of the thylakoids. Together, the results suggest compositional heterogeneity between thylakoid rings, with the inner thylakoids enriched in photosystem I. In cells depleted in chlorophyll, the amount of both chlorophyll emission components was decreased, confirming the accuracy of the spectral assignments. These results show that hyperspectral fluorescence imaging can provide unique information regarding pigment organization and localization in the cell.


Subject(s)
Pigments, Biological/metabolism , Synechocystis/cytology , Synechocystis/metabolism , Algorithms , Analysis of Variance , Biological Transport , Chlorophyll/deficiency , Microscopy, Confocal , Photosystem I Protein Complex/metabolism , Spectrometry, Fluorescence
11.
Methods Mol Biol ; 2288: 3-23, 2021.
Article in English | MEDLINE | ID: mdl-34270002

ABSTRACT

High frequency of albino plant formation in isolated microspore or anther cultures is a great problem limiting the possibility of their exploitation on a wider scale. It is highly inconvenient as androgenesis-based doubled haploid (DH) technology provides the simplest and shortest way to total homozygosity, highly valued by plant geneticists, biotechnologists and especially, plant breeders, and this phenomenon constitutes a serious limitation of these otherwise powerful tools. The genotype-dependent tendency toward albino plant formation is typical for many monocotyledonous plants, including cereals like wheat, barley, rice, triticale, oat and rye - the most important from the economical point of view. Despite many efforts, the precise mechanism underlying chlorophyll deficiency has not yet been elucidated. In this chapter, we review the data concerning molecular and physiological control over proper/disturbed chloroplast biogenesis, old hypotheses explaining the mechanism of chlorophyll deficiency, and recent studies which shed new light on this phenomenon.


Subject(s)
Edible Grain/growth & development , Edible Grain/physiology , Pigmentation , Plant Breeding/methods , Chlorophyll/deficiency , Chlorophyll/genetics , Diploidy , Edible Grain/genetics , Haploidy , Homozygote , Models, Biological , Molecular Biology/methods , Pigmentation/genetics , Pigments, Biological/deficiency , Pigments, Biological/genetics , Pollen/genetics , Pollen/growth & development , Pollen/physiology , Regeneration/genetics , Regeneration/physiology
12.
Biochim Biophys Acta ; 1787(8): 973-84, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19406099

ABSTRACT

The multiple roles of light-harvesting chlorophyll a/b-protein complexes in the structure and function of Arabidopsis chloroplasts were investigated using two chlorophyll b-less mutants grown under metal halide lamps with a significant far-red component. In ch1-3, all six light-harvesting proteins of photosystem (PS) II were greatly decreased; in ch1-3lhcb5, Lhcb5 was completely absent while the other five proteins were further decreased. The thylakoids of ch1-3 were less negatively-charged than the wild type, and those of ch1-3lhcb5 were even less so. Despite the expected weaker electrostatic repulsion, however, thylakoids in leaves of the mutants were not well stacked, an effect we attribute to lower van der Waals attraction, lower electrostatic attraction between opposite charges, and the absence or instability of PSII supercomplexes and peripheral light-harvesting trimers. The quantum yield of oxygen evolution in leaves decreased from 0.109 (wild type) to 0.087 (ch1-3) and 0.081 (ch1-3lhcb5) O(2) (photon absorbed)(-1); we attribute this decrease to an excessive spillover from PSII to PSI, a limited PSII antenna, and increased light-independent thermal dissipation in PSII in the mutants. Destabilization of the donor side of PSII, indicated by slower electron donation to the redox-active tyrosine Y(Z)(*) in ch1-3, probably enhanced PSII susceptibility to photoinactivation, increased the non-functional PSII complexes in vivo, and further inactivated PSII complexes in vitro. The evolution of chlorophyll b-containing chloroplasts seems to fine-tune oxygenic photosynthesis.


Subject(s)
Arabidopsis Proteins/physiology , Arabidopsis/physiology , Chlorophyll/physiology , Chloroplasts/physiology , Light-Harvesting Protein Complexes/physiology , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Chlorophyll/chemistry , Chlorophyll/deficiency , Chlorophyll/genetics , Chlorophyll/metabolism , Chloroplasts/chemistry , Chloroplasts/ultrastructure , Electron Spin Resonance Spectroscopy , Light-Harvesting Protein Complexes/metabolism , Magnesium Chloride/chemistry , Mutation , Oxidation-Reduction , Photosynthesis , Spectrometry, Fluorescence , Thylakoids/metabolism
13.
Plant Cell Physiol ; 51(12): 2013-30, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20980268

ABSTRACT

Because of the high demand for iron of the photosynthetic apparatus in thylakoid membranes, iron deficiency primarily affects the electron transfer between the two photosystems (PSI and PSII), resulting in photooxidative damage in plants. However, in barley, PSII is protected against photoinhibition, and the plant survives even with a low iron content in its chlorotic leaves. In this study, we report an adaptation mechanism of the photosynthetic apparatus in barley to iron deficiency, which is concomitant with the remodeling of a PSII antenna system. Transcriptome analysis revealed that long-term iron deficiency induced the expression of two genes of the major light-harvesting Chl a/b-binding protein of PSII (LHCII), namely HvLhcb1.11 and HvLhcb1.12. Chl fluorescence analysis of the wild type and Lhcb1-less chlorina mutants clearly showed that non-photochemical quenching (NPQ) of the wild type was increased by approximately 200% by iron deficiency, whereas NPQ of chlorina mutants did not change significantly under iron deficiency. The mutant showed severe photodamage in young leaves under prolonged iron deficiency, suggesting that the HvLhcb1 protein is essential for both thermal dissipation and photoprotection in iron-deficient barley. Analysis of thylakoid protein complexes revealed that the proportion of the monomeric form of Lhcb1 significantly increased in barley grown under iron-deficient conditions. We hypothesize that alteration of the HvLhcb1 subpopulations modifies the organization of LHCII in the thylakoid membranes, which is a key step for thermal dissipation to compensate for excess excitation energy and thereby protect the photosystems from serious damage in iron-deficient barley leaves.


Subject(s)
Hordeum/metabolism , Iron Deficiencies , Light-Harvesting Protein Complexes/metabolism , Photosystem II Protein Complex/metabolism , Plant Leaves/metabolism , Adaptation, Physiological , Arabidopsis/genetics , Chlorophyll/deficiency , Chlorophyll/metabolism , Gene Expression Regulation, Plant , Hordeum/genetics , Light , Light-Harvesting Protein Complexes/genetics , Mutation , Oryza/genetics , Oryza/metabolism , Photosystem II Protein Complex/genetics , Plant Leaves/chemistry , Plant Leaves/genetics , Thylakoids/genetics , Thylakoids/metabolism , Time Factors
14.
Sci Rep ; 10(1): 8518, 2020 05 22.
Article in English | MEDLINE | ID: mdl-32444695

ABSTRACT

Low temperature affects a broad spectrum of cellular components in plants, such as chloroplasts, as well as plant metabolism. On the other hand, pseudouridine (Ψ) synthases are required for the most abundant post-transcriptional modification of RNA in Escherichia coli. However, the role of rice Ψ synthases in regulating chloroplast development at low temperature remains elusive. In this study, we identified the rice thermo-sensitive chlorophyll-deficient (tcd3) mutant, which displays an albino phenotype before the 4-leaf stage and ultimately dies when grown at 20 °C, but can grow normally at 32 °C. Genetic analysis showed that the mutant trait is controlled by a single recessive nuclear gene (tcd3). Map-based cloning, complementation and knockout tests revealed that TCD3 encodes a chloroplast-localized Ψ synthase. TCD3 is a cold-induced gene that is mainly expressed in leaves. The disruption of TCD3 severely affected the transcript levels of various chloroplast-associated genes, as well as ribosomal genes involved in chloroplast rRNA assembly at low temperature (20 °C), whereas the transcript levels of these genes were normal at high temperature (32 °C). These results provide a first glimpse into the importance of rice Ψ synthase gene in chloroplast development at low temperatures.


Subject(s)
Chlorophyll/deficiency , Chloroplasts/physiology , Cold Temperature , Intramolecular Transferases/metabolism , Oryza/growth & development , Plant Proteins/metabolism , Plants, Genetically Modified/growth & development , Amino Acid Sequence , Gene Expression Regulation, Plant , Intramolecular Transferases/genetics , Oryza/enzymology , Oryza/genetics , Phenotype , Plant Leaves/enzymology , Plant Leaves/genetics , Plant Leaves/growth & development , Plant Proteins/genetics , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , Sequence Homology
15.
Curr Genet ; 55(3): 311-21, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19449186

ABSTRACT

Wogon-Sugi has been reported as a cytoplasmically inherited virescent mutant selected from a horticultural variety of Cryptomeria japonica. Although previous studies of plastid structure and inheritance indicated that at least some mutations are encoded by the chloroplast genome, the causative gene responsible for the primary chlorophyll deficiency in Wogon-Sugi, has not been identified. In this study, we identified this gene by genomic sequencing of chloroplast DNA and genetic analysis. Chloroplast DNA sequencing of 16 wild-type and 16 Wogon-Sugi plants showed a 19-bp insertional sequence in the matK coding region in the Wogon-Sugi. This insertion disrupted the matK reading frame. Although an indel mutation in the ycf1 and ycf2 coding region was detected in Wogon-Sugi, sequence variations similar to that of Wogon-Sugi were also detected in several wild-type lines, and they maintained the reading frame. Genetic analysis of the 19 bp insertional mutation in the matK coding region showed that it was found only in the chlorophyll-deficient sector of 125 full-sibling seedlings. Therefore, the 19-bp insertion in the matK coding region is the most likely candidate at present for a mutation underlying the Wogon-Sugi phenotype.


Subject(s)
Chlorophyll/metabolism , Cryptomeria/genetics , Endoribonucleases/genetics , Frameshift Mutation , Nucleotidyltransferases/genetics , Plant Proteins/genetics , Amino Acid Sequence , Base Sequence , Chlorophyll/deficiency , Cryptomeria/enzymology , Cryptomeria/metabolism , DNA, Chloroplast/chemistry , DNA, Chloroplast/genetics , Endoribonucleases/metabolism , Genetic Variation , INDEL Mutation , Molecular Sequence Data , Nucleotidyltransferases/metabolism , Phenotype , Plant Proteins/metabolism , Sequence Analysis, DNA
16.
Genes Genet Syst ; 84(5): 361-70, 2009 Oct.
Article in English | MEDLINE | ID: mdl-20154423

ABSTRACT

In order to analyze mutations induced by gamma irradiation in higher plants, we irradiated rice with gamma rays and screened for mutations expressing phenotypes of glutinous endosperm (wx), chlorophyll b deficiency, endosperm protein deficiency, gibberellin-related dwarfism, and shortened plastochron-in order to clarify types of mutations. Nucleotide sequence analysis showed that the most frequent mutation induced by gamma rays was deletion, particularly small deletion. Of the 24 mutations, 15 were small deletions (1-16 bp), four were large deletions (9.4-129.7 kbp), three were single-base substitutions, and two were inversions. Deletions 100 bp-8 kbp in length were not found, suggesting that gamma irradiation is unlikely to induce deletions of 100 bp to 8 kbp but is more likely to induce deletions between 1 and several ten bp or those of around 10 kbp or more. Based on the results, reverse genetics applications may be possible for gamma irradiation-induced deletions in rice by mismatch cleavage analysis used in Targeting Induced Local Lesions IN Genomes (TILLING) to detect small deletions and base substitutions or by using array comparative genomic hybridization (aCGH) to detect large deletions.


Subject(s)
DNA, Plant/genetics , Gamma Rays , Mutation/genetics , Oryza/genetics , Oryza/radiation effects , Plant Proteins/genetics , Chlorophyll/deficiency , DNA Primers/chemistry , DNA Primers/genetics , Endosperm , Gene Deletion , Gibberellins/metabolism , Glutens/genetics , Meristem , Plants, Genetically Modified , Polymorphism, Single Nucleotide/genetics , Sequence Analysis, DNA
17.
Plant Physiol Biochem ; 136: 43-51, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30639921

ABSTRACT

Recent studies have shown that chlorophyll (Chl) b has an important role in the regulation of leaf senescence. However, there is only limited information about senescence of plants lacking Chl b and senescence-induced decrease in photosystem II (PSII) and photosystem I (PSI) function has not even been investigated in such plants. We have studied senescence-induced changes in photosynthetic pigment content and PSII and PSI activities in detached leaves of Chl b-deficient barley mutant, chlorina f2f2 (clo). After 4 days in the dark, the senescence-induced decrease in PSI activity was smaller in clo compared to WT leaves. On the contrary, the senescence-induced impairment in PSII function (estimated from Chl fluorescence parameters) was much more pronounced in clo leaves, even though the relative decrease in Chl content was similar to wild type (WT) leaves (Hordeum vulgare L., cv. Bonus). The stronger impairment of PSII function seems to be related to more pronounced damage of reaction centers of PSII. Interestingly, exogenously applied plant hormone cytokinin 6-benzylaminopurine (BA) was able to maintain PSII function in the dark senescing clo leaves to a similar extent as in WT. Thus, considering the fact that without BA the senescence-induced decrease in PSII photochemistry in clo was more pronounced than in WT, the relative protective effect of BA was higher in Chl b-deficient mutant than in WT.


Subject(s)
Chlorophyll/deficiency , Cytokinins/pharmacology , Hordeum/metabolism , Photosystem II Protein Complex/metabolism , Aging/drug effects , Chlorophyll/metabolism , Darkness , Hordeum/drug effects , Hordeum/physiology , Photosystem II Protein Complex/drug effects , Photosystem II Protein Complex/physiology , Plant Leaves/metabolism , Plant Leaves/physiology
18.
G3 (Bethesda) ; 8(1): 253-263, 2018 01 04.
Article in English | MEDLINE | ID: mdl-29162684

ABSTRACT

The Spo0B-associated GTP-binding (Obg) proteins are essential for the viability of nearly all bacteria. However, the detailed roles of Obg proteins in higher plants have not yet been elucidated. In this study, we identified a novel rice (Oryza sativa L.) thermo-sensitive virescent mutant (tsv3) that displayed an albino phenotype at 20° before the three-leaf stage while being a normal green at 32° or even at 20° after the four-leaf stage. The mutant phenotype was consistent with altered chlorophyll content and chloroplast structure in leaves. Map-based cloning and complementation experiments showed that TSV3 encoded a small GTP-binding protein. Subcellular localization studies revealed that TSV3 was localized to the chloroplasts. Expression of TSV3 was high in leaves and weak or undetectable in other tissues, suggesting a tissue-specific expression of TSV3 In the tsv3 mutant, expression levels of genes associated with the biogenesis of the chloroplast ribosome 50S subunit were severely decreased at the three-leaf stage under cold stress (20°), but could be recovered to normal levels at a higher temperature (32°). These observations suggest that the rice nuclear-encoded TSV3 plays important roles in chloroplast development at the early leaf stage under cold stress.


Subject(s)
Chlorophyll/genetics , GTP-Binding Proteins/genetics , Genome, Plant , Oryza/genetics , Plant Leaves/genetics , Plant Proteins/genetics , Amino Acid Sequence , Chlorophyll/deficiency , Chloroplasts/metabolism , Chloroplasts/pathology , Cold Temperature , GTP-Binding Proteins/deficiency , Gene Expression , Genotype , Mutation , Organ Specificity , Oryza/growth & development , Oryza/metabolism , Phenotype , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Proteins/metabolism , Seedlings/genetics , Seedlings/growth & development , Seedlings/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Stress, Physiological
19.
Z Naturforsch C J Biosci ; 62(5-6): 403-9, 2007.
Article in English | MEDLINE | ID: mdl-17708447

ABSTRACT

"NYB" is a chlorophyll-less barley mutant, which grows relatively slow and unhealthily. The effects of water stress on photosystem II (PSII) of NYB and its wild type (WT) were investigated. Unexpected results indicated that the mutant was more resistant to water stress, because: PSII core proteins D1, D2 and LHCII declined more in WT than in NYB under water stress, and the corresponding psbA, psbD and cab mRNAs also decreased more dramatically in WT; CO2 assimilation, stomatal conductance, maximum efficiency of PSII photochemistry (Fv/Fm), efficiency of excitation energy capture by open PSII reaction centres (Fv'/Fm'), quantum yield of PSII electron transport (Phi(PSII)) and DCIP photoreduction in NYB were less sensitive to water stress than in WT, although the non-photochemical quenching coefficient (q(N)) and the photochemical quenching coefficient (q(P)) were almost the same in NYB and WT. Effective chlorophyll utilization and improved PSII protein formation in the mutant may be the reason for the enhanced stress resistance. Other possible mechanisms are also discussed.


Subject(s)
Chlorophyll/deficiency , Hordeum/genetics , Hordeum/metabolism , Plant Leaves/chemistry , Hordeum/growth & development , Kinetics , Mutation , Photosystem II Protein Complex/chemistry , Photosystem II Protein Complex/genetics , Photosystem II Protein Complex/metabolism , Stress, Mechanical , Water/analysis
20.
Sci Rep ; 6: 31419, 2016 08 10.
Article in English | MEDLINE | ID: mdl-27506952

ABSTRACT

Leaf colour regulation is important in photosynthesis and dry material production. Most of the reported chlorophyll-deficient loci are recessive. The dominant locus is rarely reported, although it may be more important than the recessive locus in the regulation of photosynthesis efficiency. During the present study, we mapped a chlorophyll-deficient dominant locus (CDE1) from the ethyl methanesulfonate-mutagenized Brassica napus line NJ7982. Using an F2 population derived from the chlorophyll-deficient mutant (cde1) and the canola variety 'zhongshuang11', a high-density linkage map was constructed, consisting of 19 linkage groups with 2,878 bins containing 13,347 SNP markers, with a total linkage map length of 1,968.6 cM. Next, the CDE1 locus was mapped in a 0.9-cM interval of chromosome C08 of B. napus, co-segregating with nine SNP markers. In the following fine-mapping of the gene using the inherited F2:3 populations of 620 individuals, the locus was identified in an interval with a length of 311 kb. A bioinformatics analysis revealed that the mapping interval contained 22 genes. These results produced a good foundation for continued research on the dominant locus involved in chlorophyll content regulation.


Subject(s)
Brassica napus/genetics , Chromosome Mapping/methods , Mutation , Plant Proteins/genetics , Brassica napus/drug effects , Brassica napus/metabolism , Chlorophyll/deficiency , Chromosomes, Plant/genetics , Ethyl Methanesulfonate/adverse effects , Photosynthesis , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Proteins/metabolism , Polymorphism, Single Nucleotide
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