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5.
Food Microbiol ; 79: 85-89, 2019 Jun.
Article in English | MEDLINE | ID: mdl-30621879

ABSTRACT

To acquire data on contamination with Norovirus in berry fruit and salad vegetables in the United Kingdom, one thousand one hundred and fifty two samples of fresh produce sold at retail in the UK were analysed for Norovirus. Of 568 samples of lettuce, 30 (5.3%) were Norovirus-positive. Most (24/30) lettuce samples which tested positive for Norovirus were grown in the UK and 19 of those 24 samples contained NoV GI. Seven/310 (2.3%) samples of fresh raspberries were Norovirus-positive. Most (6/7) of the positively-testing fresh raspberry samples were imported, but no predominance of a genogroup, or any seasonality, was observed. Ten/274 (3.6%) samples of frozen raspberries were Norovirus-positive. The country of origin of the positively-testing frozen raspberry samples was not identified in most (7/10) instances. The collected data add to the currently limited body of prevalence information on Norovirus in fresh produce, and indicate the need for implementation of effective food safety management of foodborne viruses.


Subject(s)
Food Microbiology/statistics & numerical data , Fruit/virology , Norovirus/isolation & purification , Vegetables/virology , Food Supply , Frozen Foods/virology , Lactuca/virology , Norovirus/genetics , Real-Time Polymerase Chain Reaction , Rubus/virology , United Kingdom
6.
J Fish Dis ; 42(1): 3-9, 2019 Jan.
Article in English | MEDLINE | ID: mdl-30468255

ABSTRACT

Recent outbreaks of a novel tilapia lake virus (TiLV) have raised concerns regarding the international spread of TiLV in frozen tilapia products. This study investigated the potential risks of frozen tilapia fillet as a source of TiLV transmission. It revealed that TiLV genomic RNA could be detected in tilapia fillet and the virus isolated from non-frozen and frozen fillets with clinical TiLV infection stored up to 28 days caused a cytopathic effect (CPE) formation in the susceptible cell line in vitro. However, frozen fillets from clinical TiLV infection stored for 90 and 120 days did not cause CPE in the susceptible cell line. Similarly, CPE was not observed in TiLV isolated from subclinically TiLV-infected fish fillets. In addition, in vivo bioassay revealed that despite the presence of TiLV isolated from subclinically TiLV-infected fillet stored at -20°C for 14 days, there was no evidence of TiLV disease in naïve red hybrid tilapia based on the absence of clinical signs and mortality and without the detection of TiLV genomic RNA using reverse transcription-quantitative polymerase chain reaction assay. Collectively, these findings suggested minimal risk of transmission of TiLV via frozen tilapia fillets.


Subject(s)
Fish Diseases/virology , Frozen Foods/virology , Orthomyxoviridae Infections/veterinary , Orthomyxoviridae , Tilapia/virology , Animals , Cell Line , Fish Diseases/transmission , Food Preservation/methods , Orthomyxoviridae Infections/transmission , RNA, Viral/analysis
7.
Euro Surveill ; 23(41)2018 10.
Article in English | MEDLINE | ID: mdl-30326994

ABSTRACT

Between June-September 2018, 20 hepatitis A cases were notified in six counties in Sweden. Combined epidemiological and microbiological investigations identified imported frozen strawberries produced in Poland as the source of the outbreak. Sequence analysis confirmed the outbreak strain IB in the strawberries with 100 % identity and the respective batch was withdrawn. Sharing the sequence information internationally led to the identification of 14 additional cases in Austria, linked to strawberries from the same producer.


Subject(s)
Disease Outbreaks , Foodborne Diseases/virology , Fragaria/virology , Fruit/virology , Hepatitis A virus/genetics , Hepatitis A/epidemiology , Adolescent , Adult , Aged , Aged, 80 and over , Austria/epidemiology , Child , Disease Outbreaks/statistics & numerical data , Female , Food Contamination , Foodborne Diseases/epidemiology , Frozen Foods/virology , Genotype , Hepatitis A/diagnosis , Hepatitis A/transmission , Hepatitis A/virology , Hepatitis A virus/isolation & purification , Humans , Male , Middle Aged , RNA, Viral/genetics , Sequence Analysis , Sweden/epidemiology
9.
Epidemiol Infect ; 144(13): 2765-72, 2016 10.
Article in English | MEDLINE | ID: mdl-26878755

ABSTRACT

In November 2013, the Norwegian Institute of Public Health was notified of a gastroenteritis outbreak following two meetings held at a conference centre. Identical food and beverages were served during the meetings. We investigated in order to identify the vehicle of infection and implement control measures. Meeting participants completed an online questionnaire on consumption of foods and beverages. We asked symptomatic participants to provide a stool sample. We defined a case as diarrhoea and/or vomiting in a participant who became ill within 3 days after the meeting. We calculated attack rates (AR) and adjusted risk ratios (aRR) with 95% confidence intervals (CI) using binomial regression. We conducted environmental investigations. Overall, 147/168 (88%) participants responded, of which 74 (50%) met the case definition. All five stool samples provided were norovirus positive. No kitchen staff reported being sick. Risk of illness was higher in those who consumed raspberry mousse (aRR 3·4, 95% CI 1·4-8·2) and sliced fresh fruit (aRR 1·9, 95% CI 1·3-2·8). Seventy cases (95%) ate raspberry mousse. Frozen raspberries used for the mousse were imported and not heat-treated before consumption. Non-heat-treated frozen raspberries were the most likely outbreak vehicle. Contamination by a food handler could not be excluded. We recommend heat-treatment of imported frozen berries before consumption.


Subject(s)
Caliciviridae Infections/epidemiology , Disease Outbreaks , Food Microbiology , Foodborne Diseases/epidemiology , Frozen Foods/virology , Gastroenteritis/epidemiology , Rubus/virology , Adult , Aged , Caliciviridae Infections/virology , Cohort Studies , Female , Foodborne Diseases/virology , Gastroenteritis/virology , Humans , Male , Middle Aged , Norovirus/physiology , Norway/epidemiology , Retrospective Studies , Young Adult
10.
Food Microbiol ; 60: 124-30, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27554153

ABSTRACT

Frozen berries have been repeatedly identified as vehicles for norovirus (NoV) transmission causing large gastroenteritis outbreaks. However, virus detection in berries is often hampered by the presence of RT-PCR-inhibiting substances. Here, several virus extraction methods for subsequent real-time RT-PCR-based NoV-RNA detection in strawberries were compared and optimized. NoV recovery rates (RRs) between 0.21 ± 0.13% and 10.29 ± 6.03% were found when five different artificially contaminated strawberry batches were analyzed by the ISO/TS15216-2 method indicating the presence of different amounts of RT-PCR inhibitors. A comparison of five different virus extraction methods using artificially contaminated strawberries containing high amounts of RT-PCR inhibitors revealed the best NoV RRs for the ISO/TS15216 method. Further improvement of NoV RRs from 2.83 ± 2.92% to 15.28 ± 9.73% was achieved by the additional use of Sephacryl(®)-based columns for RNA purification. Testing of 22 frozen strawberry samples from a batch involved in a gastroenteritis outbreak resulted in 5 vs. 13 NoV GI-positive and in 9 vs. 20 NoV GII-positive samples using the original ISO/TS15216 method vs. the extended protocol, respectively. It can be concluded that the inclusion of an additional RNA purification step can increase NoV detection by the ISO/TS15216-2 method in frozen berries containing high amounts of RT-PCR inhibitors.


Subject(s)
Fragaria/chemistry , Fragaria/virology , Frozen Foods/virology , Norovirus/isolation & purification , RNA, Viral/isolation & purification , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Food Microbiology/methods , Limit of Detection , Norovirus/genetics , Nucleic Acid Synthesis Inhibitors/analysis , RNA, Viral/genetics
11.
Euro Surveill ; 20(29): 21192, 2015 Jul 23.
Article in English | MEDLINE | ID: mdl-26227370

ABSTRACT

In May 2013, Italy declared a national outbreak of hepatitis A, which also affected several foreign tourists who had recently visited the country. Molecular investigations identified some cases as infected with an identical strain of hepatitis A virus subgenotype IA. After additional European Union/European Economic Area (EU/EEA) countries reported locally acquired and travel-related cases associated with the same outbreak, an international outbreak investigation team was convened, a European outbreak case definition was issued and harmonisation of the national epidemiological and microbiological investigations was encouraged. From January 2013 to August 2014, 1,589 hepatitis A cases were reported associated with the multistate outbreak; 1,102 (70%) of the cases were hospitalised for a median time of six days; two related deaths were reported. Epidemiological and microbiological investigations implicated mixed frozen berries as the vehicle of infection of the outbreak. In order to control the spread of the outbreak, suspected or contaminated food batches were recalled, the public was recommended to heat-treat berries, and post-exposure prophylaxis of contacts was performed. The outbreak highlighted how large food-borne hepatitis A outbreaks may affect the increasingly susceptible EU/EEA general population and how, with the growing international food trade, frozen berries are a potential high-risk food.


Subject(s)
Disease Outbreaks , Food Contamination , Foodborne Diseases/epidemiology , Fruit/poisoning , Hepatitis A virus/genetics , Hepatitis A/epidemiology , Adolescent , Adult , Child, Preschool , Contact Tracing , Epidemiologic Studies , Europe/epidemiology , European Union , Female , Foodborne Diseases/diagnosis , Foodborne Diseases/virology , Frozen Foods/poisoning , Frozen Foods/virology , Fruit/virology , Hepatitis A/virology , Hepatitis A virus/isolation & purification , Humans , Male , Middle Aged , Surveys and Questionnaires
12.
Euro Surveill ; 19(43)2014 Oct 30.
Article in English | MEDLINE | ID: mdl-25375902

ABSTRACT

In May 2013, a European alert was issued regarding a hepatitis A virus (HAV) outbreak in Italy. In June 2013, HAV subgenotype IA with an identical sequence was identified in Ireland in three cases who had not travelled to Italy. The investigation consisted of descriptive epidemiology, a case-control study, microbiological testing of human and food specimens, molecular typing of positive specimens and food traceback. We identified 21 outbreak cases (14 confirmed primary cases) with symptom onset between 31 January and 11 October 2013. For the case-control study, we recruited 11 confirmed primary cases and 42 matched controls. Cases were more likely than controls to have eaten berry cheesecake (matched odds ratio (mOR): 12; 95% confidence interval (CI): 1.3-114), whole frozen berries (mOR: 9.5; 95% CI: 1.0-89), yoghurt containing frozen berries (mOR: 6.6, 95% CI: 1.2-37) or raw celery (mOR: 4; 95% CI: 1.2-16). Among cases, 91% had consumed at least one of four products containing frozen berries (mOR: 12; 95% CI: 1.5-94). Sixteen food samples tested were all negative for HAV. As products containing frozen berries were implicated in the outbreak, the public were advised to heat-treat frozen berries before consumption.


Subject(s)
Disease Outbreaks/statistics & numerical data , Frozen Foods/virology , Fruit/virology , Hepatitis A virus/genetics , Hepatitis A/epidemiology , Adolescent , Adult , Base Sequence , Case-Control Studies , Child, Preschool , Female , Hepatitis A/virology , Hepatitis A virus/isolation & purification , Humans , Ireland/epidemiology , Male , Mandatory Reporting , Middle Aged , RNA, Viral/genetics , Surveys and Questionnaires
13.
Euro Surveill ; 19(15)2014 Apr 17.
Article in English | MEDLINE | ID: mdl-24762662

ABSTRACT

On 7 March 2014, an increase in hepatitis A virus (HAV) infections was identified in Norway. As of 12 April, 19 cases of HAV infection with a virus strain identical to an ongoing European outbreak have been identified. Six probable cases are currently under investigation. On 11 April, a frozen berry mix cake imported from another European country was found as the likely source of the outbreak; the importer has withdrawn the product in Norway.


Subject(s)
Disease Outbreaks , Foodborne Diseases/epidemiology , Frozen Foods/virology , Fruit/virology , Hepatitis A virus/isolation & purification , Hepatitis A/epidemiology , Foodborne Diseases/etiology , Hepatitis A/virology , Hepatitis A virus/genetics , Humans , Interviews as Topic , Norway/epidemiology , Surveys and Questionnaires
14.
Euro Surveill ; 19(18)2014 May 08.
Article in English | MEDLINE | ID: mdl-24832119

ABSTRACT

Non-travel-related hepatitis A is rare in Canada. We describe a hepatitis A outbreak investigation in British Columbia in February to May 2012 in which exposure history was collected from nine confirmed non-travel-related cases. Suspected foods were tested for hepatitis A virus (HAV): a frozen fruit blend was identified as a common exposure for six of the nine cases using supermarket loyalty cards. Consumption of the product was confirmed in each case. Genetic analysis confirmed HAV genotype 1B in the six exposed cases. Of the three non-exposed cases, the virus could not be genotyped for two of them; the virus from the other case was found to be genotype 1A and this case was therefore not considered part of the outbreak. HAV was detected by PCR from pomegranate seeds, a component of the identified frozen fruit blend. Historically low levels of HAV infection in British Columbia triggered early recognition of the outbreak. Loyalty card histories facilitated product identification and a trace-back investigation implicated imported pomegranate seeds.


Subject(s)
Disease Outbreaks , Frozen Foods/virology , Fruit/virology , Hepatitis A virus/classification , Hepatitis A virus/genetics , Hepatitis A/virology , British Columbia/epidemiology , Cooperative Behavior , Female , Genotype , Hepatitis A/epidemiology , Hepatitis A virus/isolation & purification , Humans , Immunoglobulin M/blood , Molecular Sequence Data , Polymerase Chain Reaction , Population Surveillance/methods , RNA, Viral/genetics , Sequence Analysis, DNA , Seroepidemiologic Studies
15.
Food Environ Virol ; 16(2): 180-187, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38466479

ABSTRACT

In March 2019, the Finnish Institute for Health and Welfare and Finnish Food Authority started an outbreak investigation after a notification of food business operators' recall of frozen bilberries due to a norovirus finding. A retrospective search was conducted in the food and waterborne outbreak notification system to identify the notifications linked to norovirus and consumption of bilberries in January-March 2019. Five outbreaks were found in which norovirus GII or GII.17 had been detected in patient samples. A pooled retrospective cohort study was performed for those four in which a questionnaire study had been done. A case was defined as a person with diarrhoea or vomiting within 2 days after consuming a meal studied at one of the outbreak locations. Of 79 participants, 45 (57%) cases were identified. Persons that had consumed foods containing unheated bilberries were three times more likely to get ill than those who had not consumed them (RR 3.1, CI 95% 1.2-8.1, p = 0.02). Norovirus GII.17 was found in 16/17 patient samples sent for further typing. Identical norovirus GII.17 was detected in frozen Finnish bilberries and patient samples. At the berry packaging premises, signs of norovirus GII contamination were found in packaging lines. A new procedure for extracting viral nucleic acid from food and environmental samples was used during the outbreak investigation. Consumption of industrially packed frozen berries as heated would be one of the means to prevent norovirus infections.


Subject(s)
Caliciviridae Infections , Disease Outbreaks , Food Contamination , Gastroenteritis , Norovirus , Norovirus/genetics , Norovirus/isolation & purification , Norovirus/classification , Humans , Finland/epidemiology , Caliciviridae Infections/virology , Caliciviridae Infections/epidemiology , Female , Adult , Male , Middle Aged , Retrospective Studies , Food Contamination/analysis , Gastroenteritis/virology , Gastroenteritis/epidemiology , Fruit/virology , Aged , Young Adult , Frozen Foods/virology , Prunus armeniaca/virology , Foodborne Diseases/virology , Foodborne Diseases/epidemiology , Adolescent , Genotype
16.
Food Environ Virol ; 16(2): 225-240, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38687458

ABSTRACT

Accurate detection, identification, and subsequent confirmation of pathogens causing foodborne illness are essential for the prevention and investigation of foodborne outbreaks. This is particularly true when the causative agent is an enteric virus that has a very low infectious dose and is likely to be present at or near the limit of detection. In this study, whole-genome sequencing (WGS) was combined with either of two non-targeted pre-amplification methods (SPIA and SISPA) to investigate their utility as a confirmatory method for RT-qPCR positive results of foods contaminated with enteric viruses. Frozen berries (raspberries, strawberries, and blackberries) were chosen as the food matrix of interest due to their association with numerous outbreaks of foodborne illness. The hepatitis A virus (HAV) and human norovirus (HuNoV) were used as the contaminating agents. The non-targeted WGS strategy employed in this study could detect and confirm HuNoV and HAV at genomic copy numbers in the single digit range, and in a few cases, identified viruses present in samples that had been found negative by RT-qPCR analyses. However, some RT-qPCR-positive samples could not be confirmed using the WGS method, and in cases with very high Ct values, only a few viral reads and short sequences were recovered from the samples. WGS techniques show great potential for confirmation and identification of virally contaminated food items. The approaches described here should be further optimized for routine application to confirm the viral contamination in berries.


Subject(s)
Food Contamination , Foodborne Diseases , Fragaria , Fruit , Real-Time Polymerase Chain Reaction , Rubus , Whole Genome Sequencing , Fruit/virology , Whole Genome Sequencing/methods , Food Contamination/analysis , Real-Time Polymerase Chain Reaction/methods , Fragaria/virology , Humans , Rubus/virology , Foodborne Diseases/virology , Genome, Viral/genetics , Hepatitis A virus/genetics , Hepatitis A virus/isolation & purification , Hepatitis A virus/classification , Frozen Foods/virology , Norovirus/genetics , Norovirus/isolation & purification , Norovirus/classification
17.
Epidemiol Infect ; 140(2): 260-7, 2012 Feb.
Article in English | MEDLINE | ID: mdl-21418716

ABSTRACT

In 2009, the number of foodborne norovirus outbreaks in Finland seemed markedly high, and many outbreaks seemed to be linked to imported frozen raspberries. We reviewed the data regarding all notified foodborne outbreaks in 2009 in Finland in order to assess the magnitude of the problem and to summarize the information on raspberry-linked outbreaks. Between March and August, 13 norovirus outbreaks affecting about 900 people could be linked to imported frozen raspberries. Two raspberry samples corresponding to two batches of raspberries were positive for norovirus. These two batches proved to have been the likely source in six of the 13 outbreaks. Analytical studies had not been conducted for six outbreaks, and virological test results were inconclusive in two. However, combining epidemiological and microbiological methods often enabled finding the source, as exemplified in investigation of a large school outbreak. To ensure prompt control measures in similar situations in the future, both aspects of outbreak investigations should be strengthened.


Subject(s)
Caliciviridae Infections/epidemiology , Disease Outbreaks , Frozen Foods/virology , Fruit/virology , Gastroenteritis/epidemiology , Norovirus/isolation & purification , Rosaceae/virology , Caliciviridae Infections/virology , Feces/virology , Finland/epidemiology , Food Microbiology , Gastroenteritis/virology , Humans , Incidence , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction
18.
Food Microbiol ; 28(8): 1448-52, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21925027

ABSTRACT

A bacteriophage (phage) that infected strains of the species Listeria monocytogenes as well as Listeria ivanovii and Listeria welshimeri, but not Listeria grayi or Listeria innocua, was isolated from sheep faeces. The phage had a contractile tail and an icosohedral head indicating that it was a myovirus, and was morphologically similar to phage A511. At 30 °C, phages added at 5.2 × 107 PFU ml⁻¹ prevented the growth in broth of L. monocytogenes present at approximately twice this concentration for 7 h, but re-growth occurred such that the concentration after 24 h incubation was similar in both control and phage-treated cultures. At the same temperature, but on the surface of vacuum-packed ready-to-eat chicken breast roll, there was an immediate 2.5 log10 CFU cm⁻² reduction in pathogen concentration following addition of phages and then re-growth. However, at a temperature reflecting that at which a chilled food might be held (5 °C), this re-growth was prevented over 21 days incubation. The data suggest a dose-dependent rapid reduction in pathogen concentration followed by no continued phage-mediated effect. These results, alongside other published data, indicate that a high concentration of phages per unit area is required to ensure significant inactivation of target pathogens on food surfaces.


Subject(s)
Bacteriophages/physiology , Food Preservation/methods , Frozen Foods/microbiology , Listeria monocytogenes/growth & development , Listeria monocytogenes/virology , Poultry Products/microbiology , Animals , Bacteriophages/isolation & purification , Chickens , Feces/virology , Female , Food Contamination/analysis , Food Contamination/prevention & control , Frozen Foods/analysis , Frozen Foods/virology , Refrigeration , Sheep
19.
Int J Food Microbiol ; 314: 108392, 2020 Feb 02.
Article in English | MEDLINE | ID: mdl-31698282

ABSTRACT

Strawberry production and exports have been increasing in Spain in recent decades. However, little information is available about their microbiological quality. Due to the growing concern about the microbial safety of these fruits, the objective of this investigation was to study the microbiological quality and the prevalence of the main foodborne pathogens on strawberries sold in Spain. Fresh (n = 152) and frozen (n = 31) samples were obtained from marketplaces and fields in 2017 and 2018. The samples were assayed for total aerobic mesophilic microorganisms (TAM), moulds and yeasts (M&Y), total coliforms (TC), Escherichia coli, Salmonella spp., Listeria monocytogenes as well as Norovirus (NoV) GI and GII. The microbiological counts ranged from <1.70 (detection limit, dl) - 5.89 log10 CFU/g (mean 3.78 log10 CFU/g) for TAM; 2.10-5.86 log10 CFU/g (mean 3.80 log10 CFU/g) for M&Y; and <0.70 (dl) - 4.91 log10 CFU/g (mean 2.15 log10 CFU/g) for TC in fresh strawberries. In frozen strawberries, the counts were <1.70 (dl) - 3.66 log10 CFU/g (mean 2.30 log10 CFU/g) for TAM; <1.70 (dl) - 2.76 log10 CFU/g (mean 1.82 log10 CFU/g) for M&Y; and <0.70(dl) - 1.74 log10 CFU/g (mean 0.77 log10 CFU/g) for TC. All the samples in this study tested negative for Salmonella spp., L. monocytogenes. E. coli and NoV GI and GII genome. A global overview of all the data was executed using Principal Component Analysis (PCA), and the results showed that the scores and loadings according to principal components 1 (PC1) and 2 (PC2) accounted for 75.9% of the total variance, allowing a distinction between fresh and frozen samples. The presence of moulds was significantly higher in the supermarket samples whereas the presence of total coliforms was significantly higher in the field samples (p < 0.05). Although pathogenic microorganisms were not found, preventative measures and prerequisites in the strawberry production chain must be considered in order to avoid possible foodborne diseases related to the microbiological quality of the fruit.


Subject(s)
Food Microbiology/statistics & numerical data , Food Quality , Fragaria/microbiology , Fragaria/virology , Frozen Foods , Fruit , Bacteria/isolation & purification , Colony Count, Microbial , Food Contamination/analysis , Frozen Foods/microbiology , Frozen Foods/virology , Fruit/microbiology , Fruit/virology , Fungi/isolation & purification , Norovirus/genetics , Norovirus/isolation & purification , Spain
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