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1.
Proc Natl Acad Sci U S A ; 118(52)2021 12 28.
Article in English | MEDLINE | ID: mdl-34930840

ABSTRACT

Thymol and carvacrol are phenolic monoterpenes found in thyme, oregano, and several other species of the Lamiaceae. Long valued for their smell and taste, these substances also have antibacterial and anti-spasmolytic properties. They are also suggested to be precursors of thymohydroquinone and thymoquinone, monoterpenes with anti-inflammatory, antioxidant, and antitumor activities. Thymol and carvacrol biosynthesis has been proposed to proceed by the cyclization of geranyl diphosphate to γ-terpinene, followed by a series of oxidations via p-cymene. Here, we show that γ-terpinene is oxidized by cytochrome P450 monooxygenases (P450s) of the CYP71D subfamily to produce unstable cyclohexadienol intermediates, which are then dehydrogenated by a short-chain dehydrogenase/reductase (SDR) to the corresponding ketones. The subsequent formation of the aromatic compounds occurs via keto-enol tautomerisms. Combining these enzymes with γ-terpinene in in vitro assays or in vivo in Nicotiana benthamiana yielded thymol and carvacrol as products. In the absence of the SDRs, only p-cymene was formed by rearrangement of the cyclohexadienol intermediates. The nature of these unstable intermediates was inferred from reactions with the γ-terpinene isomer limonene and by analogy to reactions catalyzed by related enzymes. We also identified and characterized two P450s of the CYP76S and CYP736A subfamilies that catalyze the hydroxylation of thymol and carvacrol to thymohydroquinone when heterologously expressed in yeast and N. benthamiana Our findings alter previous views of thymol and carvacrol formation, identify the enzymes involved in the biosynthesis of these phenolic monoterpenes and thymohydroquinone in the Lamiaceae, and provide targets for metabolic engineering of high-value terpenes in plants.


Subject(s)
Cymenes/metabolism , Cytochrome P-450 Enzyme System/metabolism , Lamiaceae/metabolism , Short Chain Dehydrogenase-Reductases/metabolism , Thymol/analogs & derivatives , Thymol/metabolism , Cymenes/chemistry , Cytochrome P-450 Enzyme System/genetics , Lamiaceae/enzymology , Lamiaceae/genetics , Metabolic Networks and Pathways/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Short Chain Dehydrogenase-Reductases/genetics , Thymol/chemistry
2.
Chem Biodivers ; 20(4): e202300027, 2023 Apr.
Article in English | MEDLINE | ID: mdl-36891984

ABSTRACT

Cyclotrichium niveum (Boiss.) Manden & Scheng belonging to the Lamiaceae family, which is an endemic species in the eastern Anatolian region of Turkey, has an important place in terms of ethno-botany. The phytochemical composition of the plant, inhibition of acetylcholinesterase (AChE) (which hydrolyzes the neurotransmitter acetylcholine), inhibition of paraoxonase for antiatherosclerotic activity (hPON 1) (which detoxifies organophosphates), and antioxidant capacity were all investigated in this study. Phytochemical content was determined by LC/MS/MS, and enzyme inhibition and antioxidant capacity studies were determined by spectrophotometer. Antioxidant capacity of C. niveum extracts (methanol, hexane, and water) was determined by applying ABTS⋅+ , DPPH⋅, FRAP, and CUPRAC methods. Both the water and the methanol extracts of the C. niveum exhibited significant inhibition on the AChE (IC50 value for methanol and water extract 0.114±0.14 mg/mL (R2:0.997) and 0.178±0.12 mg/mL (R2 : 0.994), respectively). In contrast, the methanol and water extracts of the C. niveum did not exhibit the inhibition effect on hPON 1. The highest activity for ABTS⋅+ was 66.53 % in the water extract, and DPPH⋅ was 55.03 % in the methanol extract. In the metal-reducing power assay, the absorbance was 0.168±0.04 for FRAP water extract and 0.621±0.01 for CUPRAC methanol extract. According to LC/MS/MS analyses, hydroxybenzoic acid, salicylic acid, syringic acid, acetohydroxamic acid and luteolin determined in the plant extract. As a consequence, C. niveum which has antioxidant, anti-atherogenic and anti-neurodegenerative properties has the potential to be used as a natural medication instead of synthetic drugs used in Alzheimer's patients.


Subject(s)
Antioxidants , Enzyme Inhibitors , Lamiaceae , Humans , Acetylcholinesterase , Antioxidants/chemistry , Lamiaceae/chemistry , Lamiaceae/enzymology , Methanol , Phenols/chemistry , Phytochemicals , Plant Extracts/pharmacology , Plant Extracts/chemistry , Tandem Mass Spectrometry , Water , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology
3.
J Biol Chem ; 294(4): 1349-1362, 2019 01 25.
Article in English | MEDLINE | ID: mdl-30498089

ABSTRACT

Members of the mint family (Lamiaceae) accumulate a wide variety of industrially and medicinally relevant diterpenes. We recently sequenced leaf transcriptomes from 48 phylogenetically diverse Lamiaceae species. Here, we summarize the available chemotaxonomic and enzyme activity data for diterpene synthases (diTPSs) in the Lamiaceae and leverage the new transcriptomes to explore the diTPS sequence and functional space. Candidate genes were selected with an intent to evenly sample the sequence homology space and to focus on species in which diTPS transcripts were found, yet from which no diterpene structures have been previously reported. We functionally characterized nine class II diTPSs and 10 class I diTPSs from 11 distinct plant species and found five class II activities, including two novel activities, as well as a spectrum of class I activities. Among the class II diTPSs, we identified a neo-cleroda-4(18),13E-dienyl diphosphate synthase from Ajuga reptans, catalyzing the likely first step in the biosynthesis of a variety of insect-antifeedant compounds. Among the class I diTPSs was a palustradiene synthase from Origanum majorana, leading to the discovery of specialized diterpenes in that species. Our results provide insights into the diversification of diterpene biosynthesis in the mint family and establish a comprehensive foundation for continued investigation of diterpene biosynthesis in the Lamiaceae.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Databases, Pharmaceutical , Diterpenes/metabolism , Lamiaceae/enzymology , Plant Leaves/metabolism , Plant Proteins/metabolism , Gene Expression Regulation, Plant , Lamiaceae/genetics , Lamiaceae/growth & development , Phylogeny , Plant Leaves/genetics , Plant Leaves/growth & development , Plant Proteins/genetics
4.
Biochemistry ; 57(25): 3473-3479, 2018 06 26.
Article in English | MEDLINE | ID: mdl-29787239

ABSTRACT

Plants from the widespread Lamiaceae family produce many labdane-related diterpenoids, a number of which serve medicinal roles, and whose biosynthesis is initiated by class II diterpene cyclases (DTCs). These enzymes utilize a general acid-base catalyzed cyclo-isomerization reaction to produce various stereoisomers of the eponymous labdaenyl carbocation intermediate, which can then undergo rearrangement and/or the addition of water prior to terminating deprotonation. Identification of the pair of residues that cooperatively serve as the catalytic base in the DTCs that produce ent-copalyl diphosphate (CPP) required for gibberellin phytohormone biosynthesis in all vascular plants has led to insight into the addition of water as well as rearrangement. Lamiaceae plants generally contain an additional DTC that produces the enantiomeric normal CPP, as well as others that yield hydroxylated products derived from the addition of water. Here the catalytic base in these DTCs was investigated. Notably, changing two adjacent residues that seem to serve as the catalytic base in the normal CPP synthase from Salvia miltiorrhiza (SmCPS) to the residues found in the closely related perigrinol diphosphate synthase from Marrubium vulgare (MvPPS), which produces a partially rearranged and hydroxylated product derived from the distinct syn stereoisomer of labdaenyl+, altered the product outcome in an unexpected fashion. Specifically, the relevant SmCPS:H315N/T316V double mutant produces terpentedienyl diphosphate, which is derived from complete substituent rearrangement of syn rather than normal labdaenyl+. Accordingly, alteration of the residues that normally serve as the catalytic base surprisingly can impact stereocontrol.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Biosynthetic Pathways , Diterpenes/metabolism , Lamiaceae/enzymology , Plant Proteins/metabolism , Diterpenes/chemistry , Lamiaceae/chemistry , Lamiaceae/metabolism , Models, Molecular , Plant Growth Regulators/metabolism , Salvia miltiorrhiza/chemistry , Salvia miltiorrhiza/enzymology , Salvia miltiorrhiza/metabolism , Stereoisomerism , Substrate Specificity
5.
Zhongguo Zhong Yao Za Zhi ; 42(3): 465-472, 2017 Feb.
Article in Zh | MEDLINE | ID: mdl-28952250

ABSTRACT

Geranylgeranyl pyrophosphate synthase enzyme is one of the key enzymes in the synthesis pathway of diterpenoid. Nine Lamiaceae genus GGPS synthase in Genebank was analyzed in this article. GGPS synthase the nucleic acid sequences and amino acid sequences, physicochemical properties, the signal peptide, leader peptides, transmembrane topological structure, hydrophobic, hydrophilic, subcellular localization, secondary structure, function domain, tertiary structure and evolutional relationship were predicted by using bioinformatics methods.Phylogenetic tree was constructed for the geranylgeranyl pyrophosphate synthase enzyme protein family. The results showed that GGPS amino acid sequence of the physical and chemical properties were basically identical, mainly hydrophilic protein, there existed chloroplast transit peptide, and no signal peptide and membrane structure domain, which mainly located in the chloroplast, the minor part located in mitochondria. The main secondary structures of the proteins are alpha helix and random coil. All these proteins have catalytic residues, aspartate-rich region, active site lid residues, substrate-Mg2+ binding site. The results provide theoretical reference for study on both the enzymatic characteristics of GGPS and the biosynthesis pathway of diterpenoid.


Subject(s)
Geranylgeranyl-Diphosphate Geranylgeranyltransferase/genetics , Lamiaceae/genetics , Plant Proteins/genetics , Amino Acid Sequence , Computational Biology , Lamiaceae/enzymology , Phylogeny
6.
Int J Phytoremediation ; 18(10): 966-76, 2016 Oct 02.
Article in English | MEDLINE | ID: mdl-27153457

ABSTRACT

Hydroponic culture was used to comparatively investigate the copper (Cu)-induced alteration to sucrose metabolism and biomass allocation in two Elsholtzia haichowensis Sun populations with one from a Cu-contaminated site (CS) and the other from a non-contaminated site (NCS). Experimental results revealed that biomass allocation preferred roots over shoots in CS population, and shoots over roots in NCS population under Cu exposure. The difference in biomass allocation was correlated with the difference in sucrose partitioning between the two populations. Cu treatment (45 µM) significantly decreased leaf sucrose content and increased root sucrose content in CS population as a result of the increased activities of leaf sucrose synthesis enzymes (sucrose phosphate synthetase and sucrose synthase) and root sucrose cleavage enzyme (vacuolar invertase), which led to increased sucrose transport from leaves to roots. In contrast, higher Cu treatment increased sucrose content in leaves and decreased sucrose content in roots in NCS population as a result of the decreased activities of root sucrose cleavage enzymes (vacuolar and cell wall invertases) that led to less sucrose transport from leaves to roots. These results provide important insights into carbon resource partitioning and biomass allocation strategies in metallophytes and are beneficial for the implementation of phytoremediation techniques.


Subject(s)
Copper/toxicity , Lamiaceae/drug effects , Plant Roots/drug effects , Soil Pollutants/toxicity , Sucrose/metabolism , Biodegradation, Environmental , China , Lamiaceae/enzymology , Lamiaceae/growth & development , Lamiaceae/metabolism , Plant Leaves/drug effects , Plant Leaves/enzymology , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Roots/enzymology , Plant Roots/growth & development , Plant Roots/metabolism
7.
Indian J Exp Biol ; 54(4): 254-61, 2016 Apr.
Article in English | MEDLINE | ID: mdl-27295922

ABSTRACT

Plants adapt themselves to overcome adverse environmental conditions, and this involves a plethora of concurrent cellular activities. Physiological experiments or metabolic profiling can quantify this response. Among several diseases of Pogostemon cablin (Blanco) Benth. (Patchouli), root-knot nematode infection caused by Meloidogyne incognita (Kofoid and White) Chitwood causes severe damage to the plant and hence, the oil production. In the present study, we identified M. incognita morphologically and at molecular level using sequenced characterized amplified region marker (SCAR). M. incognita was artificially inoculated at different levels of second stage juveniles (J2) to examine the effect on Patchouli plant growth parameters. Peroxidase and polyphenol oxidase enzyme activity and changes in the total phenol and chlorophyll contents in M. incognita was also evaluated in response to infection. The results have demonstrated that nematode infestation leads to increased peroxidase activities in the leaves of the patchouli plants and thereby, increase in phenolic content as a means of defence against nematode infestation. Chlorophyll content was also found decreased but no changes in polyphenol oxidase enzyme activity.


Subject(s)
Antioxidants/metabolism , Catechol Oxidase/metabolism , Chlorophyll/metabolism , Lamiaceae/metabolism , Nematoda/pathogenicity , Peroxidases/metabolism , Animals , Lamiaceae/enzymology , Lamiaceae/growth & development
8.
Plant Cell Rep ; 34(10): 1781-90, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26123289

ABSTRACT

KEY MESSAGE: Vacuolar invertases (VINs) from Cu-tolerant and non-tolerant populations of Elsholtzia haichowensis have similar enzyme properties, and the enzyme protein divergences contribute little to the varied VIN activities between the contrasting populations. In our previous studies of Elsholtzia haichowensis, vacuolar invertase (VIN) activity in roots of a Cu-tolerant population was found to be significantly higher than that of a non-tolerant population under Cu stress. Divergences of amino acid residues in a sucrose-binding box and other regions of the VINs were detected. To test whether the amino acid divergences influence the enzyme properties of VINs, and thus are relevant to the differences in enzyme activities between the contrasting populations of E. haichowensis, two VIN genes from the Cu-tolerant population (EhCvINV) and non-tolerant population (EhNvINV) were heterologously expressed in Pichia pastoris, and the enzyme properties of the recombinants were characterized and compared. Both of the recombinant enzymes showed temperature optima of 70 °C and pH optima of 4.5-5.5. Copper as well as other heavy metals caused almost the same inhibition to EhNvINV and EhCvINV. No statistically significant differences were observed between EhNvINV and EhCvINV in K m and k cat values for sucrose. The results provided evidence that the observed residue divergences had little influence on the enzyme properties of VIN in E. haichowensis, and the varied VIN activities between the contrasting populations under Cu stress were not relevant to the amino acid divergences in the proteins. Also, some other possible reasons accounting for this difference in invertase activities were discussed, such as up-regulation of expression of the EhCvINV gene under Cu stress, as Cu tolerance mechanisms in Cu-mine plants.


Subject(s)
Lamiaceae/enzymology , Lamiaceae/genetics , beta-Fructofuranosidase/genetics , beta-Fructofuranosidase/metabolism , Copper/toxicity , Lamiaceae/drug effects
9.
BMC Plant Biol ; 14: 86, 2014 Apr 02.
Article in English | MEDLINE | ID: mdl-24694353

ABSTRACT

BACKGROUND: Torenia (Torenia fournieri Lind.) is a model plant increasingly exploited in studies in various disciplines, including plant engineering, biochemistry, physiology, and ecology. Additionally, cultivars with different flower colors have been bred and made commercially available. Flower color in torenia is mainly attributed to the accumulation of anthocyanins, but the molecular mechanisms inducing flower color mutations in torenia have not been well elucidated. In this study, we therefore attempted to identify the cause of white coloration in torenia by comparing the white-flowered cultivar Crown White (CrW) with Crown Violet (CrV), a violet-flowered variety. RESULTS: In an expression analysis, no flavanone 3-hydroxylase (TfF3H) transcript accumulation was detected in CrW petals. Sequence analyses revealed that a novel long terminal repeat (LTR)-type retrotransposable element, designated as TORE1 (Torenia retrotransposon 1), is inserted into the 5'-upstream region of the TfF3H gene in CrW. A transient expression assay using torenia F3H promoters with or without TORE1 insertion showed that the TORE1 insertion substantially suppressed F3H promoter activity, suggesting that this insertion is responsible for the absence of F3H transcripts in white petals. Furthermore, a transformation experiment demonstrated that the introduction of a foreign gentian F3H cDNA, GtF3H, into CrW was able to recover pink-flower pigmentation, indicating that F3H deficiency is indeed the cause of the colorless flower phenotype in CrW. Detailed sequence analysis also identified deletion mutations in flavonoid 3'-hydroxylase (TfF3'H) and flavonoid 3',5'- hydroxylase (TfF3'5'H) genes, but these were not directly responsible for white coloration in this cultivar. CONCLUSIONS: Taken together, a novel retrotransposable element, TORE1, inserted into the F3H 5'-upstream region is the cause of deficient F3H transcripts in white-flowered torenia, thereby leading to reduced petal anthocyanin levels. This is the first report of a retrotransposable element involved in flower color mutation in the genus Torenia.


Subject(s)
Flowers/genetics , Lamiaceae/genetics , Mutation/genetics , Pigmentation/genetics , Arabidopsis/genetics , Base Sequence , Biosynthetic Pathways/genetics , Blotting, Southern , Cytochrome P-450 Enzyme System/genetics , DNA, Complementary/genetics , Flavonoids/metabolism , Flowers/enzymology , Gene Expression Regulation, Plant , Genes, Plant , Genetic Complementation Test , Gentiana/enzymology , Lamiaceae/enzymology , Plant Cells/metabolism , Plants, Genetically Modified , Promoter Regions, Genetic/genetics , Suspensions , Transformation, Genetic
10.
Protein Expr Purif ; 97: 61-71, 2014 May.
Article in English | MEDLINE | ID: mdl-24576659

ABSTRACT

Probing a cDNA library extracted from Pogostemon cablin (Indian Patchouli) with gene specific primers, a variant of patchoulol synthase PTS (GenBank acc. No.: AY508730) was amplified, cloned, and sequenced. The amino acid sequence deduced from the cloned cDNA exhibited a sequence variation of 3.4% compared to the annotated sequence. The enzyme variant tended to form inclusion bodies when expressed in Escherichia coli. The coding sequence was fused to the T7-tag, His-tag and to thioredoxin. Constructs were expressed in three different E. coli expression strains, with several strain/construct combinations yielding soluble enzyme. By fusion to thioredoxin and careful codon optimization of the eukaryotic sequence, soluble expression could be improved on average by 42% in comparison to an unoptimized, His-tagged construct. The thioredoxin-fused protein was successfully purified using a one-step Co(2+)-IMAC purification procedure. Bioactivity assays using prepared farnesyl diphosphate (FDP) in milliliter-scale batch reactions, showed activity of the fused enzyme even with thioredoxin attached. The product spectrum of the enzyme was compared to patchouli oil standards by GC-MS and the main products were identified. Interestingly, the variant showed a shift in product spectrum with germacrene A being the most abundant product instead of patchouli alcohol. In silico structural modeling shows a possible chemical and structural change in the active site of the enzyme, which might be responsible for the shift in product composition.


Subject(s)
DNA, Complementary/genetics , Escherichia coli/genetics , Isomerases/genetics , Lamiaceae/enzymology , Recombinant Fusion Proteins/genetics , Thioredoxins/genetics , Amino Acid Sequence , Cloning, Molecular , Isomerases/chemistry , Isomerases/isolation & purification , Isomerases/metabolism , Lamiaceae/genetics , Models, Molecular , Molecular Sequence Data , Polyisoprenyl Phosphates/metabolism , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/isolation & purification , Recombinant Fusion Proteins/metabolism , Sesquiterpenes/metabolism , Sesquiterpenes, Germacrane/metabolism
11.
Planta ; 238(1): 191-204, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23624978

ABSTRACT

The identification, isolation and functional characterization of two genes encoding two monoterpene synthases-γ-terpinene synthase (Tctps2) and α-terpineol synthase (Tctps5)-from three chemically distinct Thymus caespititius (Lamiaceae) genotypes were performed. Genomic exon-intron structure was also determined for both terpene synthase genes, revealing an organization with seven exons and six introns. The cDNA of Tctps2 was 2,308 bp long and had an open reading frame of 1,794 bp encoding for a protein with 598 amino acids. Tctps5 was longer, mainly due to intron sequences, and presented high intraspecific variability on the plants analyzed. It encoded for a protein of 602 amino acids from an open reading frame of 1,806 bp comprising a total of 2,507 bp genomic sequence. The amino acid sequence of these two active Tctps genes shared 74 % pairwise identity, ranging between 42 and 94 % similarity with about 50 known terpene synthases of other Lamiaceae species. Gene expression revealed a multi-product Tctps2 and Tctps5 enzymes, producing γ-terpinene and α-terpineol as major components, respectively. These enzymatic results were consistent with the monoterpene profile present in T. caespititius field plants, suggesting a transcriptional regulation in leaves. Herewith reported for the first time for this species, these two newly characterized Tctps genes improve the understanding of the molecular mechanisms of reaction responsible for terpene biosynthesis and chemical diversity found in T. caespititius.


Subject(s)
Alkyl and Aryl Transferases/genetics , Lamiaceae/enzymology , Lamiaceae/genetics , Alkyl and Aryl Transferases/metabolism , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Gene Expression Regulation, Plant , Introns , Lamiaceae/metabolism , Molecular Sequence Data , Phylogeny , Plant Proteins/genetics , Plant Proteins/metabolism , Sequence Homology, Amino Acid
12.
Org Biomol Chem ; 11(44): 7650-2, 2013 Nov 28.
Article in English | MEDLINE | ID: mdl-24108414

ABSTRACT

Miltiradiene (1) is the precursor of phenolic diterpenoids such as ferruginol (2), requiring aromatization and hydroxylation. While this has been attributed to a single cytochrome P450 (CYP76AH1), characterization of the rosemary ortholog CYP76AH4 led to the discovery that these CYPs simply hydroxylate the facilely oxidized aromatic intermediate abietatriene (3).


Subject(s)
Cytochrome P-450 Enzyme System/metabolism , Diterpenes/metabolism , Lamiaceae/metabolism , Phenols/chemistry , Diterpenes/chemistry , Lamiaceae/enzymology , Nuclear Magnetic Resonance, Biomolecular
13.
Plant Sci ; 314: 111119, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34895548

ABSTRACT

Peppermint (Mentha x piperita L.) and Japanese catnip (Schizonepeta tenuifolia (Benth.) Briq.) accumulate p-menthane monoterpenoids with identical functionalization patterns but opposite stereochemistry. In the present study, we investigate the enantioselectivity of multiple enzymes involved in monoterpenoid biosynthesis in these species. Based on kinetic assays, mint limonene synthase, limonene 3-hydroxylase, isopiperitenol dehydrogenase, isopiperitenone reductase, and menthone reductase exhibited significant enantioselectivity toward intermediates of the pathway that proceeds through (-)-4S-limonene. Limonene synthase, isopiperitenol dehydrogenase and isopiperitenone reductase of Japanese catnip preferred intermediates of the pathway that involves (+)-4R-limonene, whereas limonene 3-hydroxylase was not enantioselective, and the activities of pulegone reductase and menthone reductase were too low to acquire meaningful kinetic data. Molecular modeling studies with docked ligands generally supported the experimental data obtained with peppermint enzymes, indicating that the preferred enantiomer was aligned well with the requisite cofactor and amino acid residues implicated in catalysis. A striking example for enantioselectivity was peppermint (-)-menthone reductase, which binds (-)-menthone with exquisite affinity but was predicted to bind (+)-menthone in a non-productive orientation that positions its carbonyl functional group at considerable distance to the NADPH cofactor. The work presented here lays the groundwork for structure-function studies aimed at unraveling how enantioselectivity evolved in closely related species of the Lamiaceae and beyond.


Subject(s)
Lamiaceae/enzymology , Mentha piperita/enzymology , Mixed Function Oxygenases/metabolism , Monoterpenes/metabolism , Oxidoreductases/metabolism , Stereoisomerism , Molecular Structure
14.
Appl Environ Microbiol ; 77(3): 1033-40, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21148687

ABSTRACT

The ability to transfer metabolic pathways from the natural producer organisms to the well-characterized cell factory Saccharomyces cerevisiae is well documented. However, as many secondary metabolites are produced by collaborating enzymes assembled in complexes, metabolite production in yeast may be limited by the inability of the heterologous enzymes to collaborate with the native yeast enzymes. This may cause loss of intermediates by diffusion or degradation or due to conversion of the intermediate through competitive pathways. To bypass this problem, we have pursued a strategy in which key enzymes in the pathway are expressed as a physical fusion. As a model system, we have constructed several fusion protein variants in which farnesyl diphosphate synthase (FPPS) of yeast has been coupled to patchoulol synthase (PTS) of plant origin (Pogostemon cablin). Expression of the fusion proteins in S. cerevisiae increased the production of patchoulol, the main sesquiterpene produced by PTS, up to 2-fold. Moreover, we have demonstrated that the fusion strategy can be used in combination with traditional metabolic engineering to further increase the production of patchoulol. This simple test case of synthetic biology demonstrates that engineering the spatial organization of metabolic enzymes around a branch point has great potential for diverting flux toward a desired product.


Subject(s)
Geranyltranstransferase/metabolism , Isomerases/metabolism , Lamiaceae/enzymology , Recombinant Fusion Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Sesquiterpenes/metabolism , Biotechnology/methods , Geranyltranstransferase/genetics , Isomerases/genetics , Lamiaceae/genetics , Lamiaceae/growth & development , Plant Proteins/genetics , Plant Proteins/metabolism , Protein Engineering/methods , Recombinant Fusion Proteins/genetics , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism
15.
Plant Commun ; 2(5): 100233, 2021 09 13.
Article in English | MEDLINE | ID: mdl-34746763

ABSTRACT

Terpenoids are the largest class of natural products with complex structures and extensive bioactivities; their scaffolds are generated by diverse terpenoid synthases (TPSs) from a limited number of isoprenoid diphosphate precursors. Promiscuous TPSs play important roles in the evolution of terpenoid chemodiversity, but they remain largely unappreciated. Here, an extremely promiscuous terpenoid synthase (CcTPS1) of the TPS-b subfamily was cloned and functionally characterized from a leaf-specific transcriptome of the Lamiaceae plant Colquhounia coccinea var. mollis. CcTPS1 is the first sester-/di-/sesqui-/mono-TPS identified from the plant kingdom, accepting C25/C20/C15/C10 diphosphate substrates to generate a panel of sester-/di-/sesqui-/mono-terpenoids. Engineered Escherichia coli expressing CcTPS1 produced three previously unreported terpenoids (two sesterterpenoids and a diterpenoid) with rare cyclohexane-containing skeletons, along with four sesquiterpenoids and one monoterpenoid. Their structures were elucidated by extensive nuclear magnetic resonance spectroscopy. Nicotiana benthamiana transiently expressing CcTPS1 also produced the diterpenoid and sesquiterpenoids, demonstrating the enzyme's promiscuity in planta. Its highly leaf-specific expression pattern combined with detectable terpenoid products in leaves of C. coccinea var. mollis and N. benthamiana expressing CcTPS1 suggested that CcTPS1 was mainly responsible for diterpenoid and sesquiterpenoid biosynthesis in plants. CcTPS1 expression and the terpenoid products could be induced by methyl jasmonate, suggesting their possible role in plant-environment interaction. CcTPS1 was localized to the cytosol and may differ from mono-TPSs in subcellular compartmentalization and substrate tolerance. These findings will greatly aid our understanding of plant TPS evolution and terpenoid chemodiversity; they also highlight the enormous potential of transcriptome mining and heterologous expression for the exploration of unique enzymes and natural products hidden in plants.


Subject(s)
Alkyl and Aryl Transferases/genetics , Lamiaceae/genetics , Plant Proteins/genetics , Terpenes/metabolism , Alkyl and Aryl Transferases/metabolism , Lamiaceae/enzymology , Lamiaceae/metabolism , Plant Proteins/metabolism
16.
J Am Chem Soc ; 132(9): 2998-3008, 2010 Mar 10.
Article in English | MEDLINE | ID: mdl-20148554

ABSTRACT

Incubations of isotopically pure [2-(2)H(1)](E,E)-farnesyl diphosphate with recombinant patchoulol synthase (PTS) from Pogostemon cablin afforded a 65:35 mixture of monodeuterated and dideuterated patchoulols as well as numerous sesquiterpene hydrocarbons. Extensive NMR analyses ((1)H and (13)C NMR, (1)H homodecoupling NMR, HMQC, and (2)H NMR) of the labeled patchoulol mixture and comparisons of the spectra with those of unlabeled alcohol led to the conclusion that the deuterium label was located at positions (patchoulol numbering system) C5 (both isotopomers, ca. 100%) and C12 (minor isotopomer, 30-35%), that is, an approximately 2:1 mixture of [5-(2)H(1)]- and [5,12-(2)H(2)]-patchoulols. Low-resolution FIMS analyses and isotope ratio calculations further corroborated the composition of the mixture as mainly one singly deuterated and one doubly deuterated patchoulol. From a mechanistic point of view, the formation of [5,12-(2)H(2)]patchoulol is rationalized through the intermediacy of an unknown exocyclic [7,10:1,5]patchoul-4(12)-ene (15-d(1)), which could incorporate a deuteron at the C-12 position on the pathway to doubly labeled patchoulol. The corresponding depletion of deuterium content observed in the hydrocarbon coproducts, beta-patchoulene and alpha-guaiene (55% d(0)), identified the source of the excess label found in patchoulol-d(2). Comparison of the PTS amino acid sequence with those of other sesquiterpene synthases, and examination of an active site model, suggested that re-orientation of leucine 410 side chain in PTS might facilitate the creation of a 2-pocket active site where the observed deuteron transfers could occur. The retention of deuterium at C5 in the labeled patchoulol and its absence at C4 rule out an alternative mechanism involving two consecutive 1,2-hydride shifts and appears to confirm the previously proposed occurrence of a 1,3-hydride shift across the 5-membered ring. A new, semisystematic nomenclature is presented for the purpose of distinguishing the three different skeletal structures of the patchoulane sesquiterpenes.


Subject(s)
Biocatalysis , Deuterium/chemistry , Isomerases/metabolism , Polyisoprenyl Phosphates/chemistry , Sesquiterpenes/chemistry , Cyclization , Isomerases/chemistry , Isotope Labeling , Lamiaceae/enzymology , Molecular Structure , Recombinant Proteins/chemistry , Sesquiterpenes/chemical synthesis , Stereoisomerism
17.
Biotechnol Appl Biochem ; 52(Pt 3): 185-90, 2009 Mar.
Article in English | MEDLINE | ID: mdl-18547169

ABSTRACT

The monoterpene D-limonene shows cancer preventative and cancer therapeutic activities in vitro and in vivo. Unlike plants, animals are unable to synthesize limonene de novo and obtain limonene through dietary sources. In the present study we established transgenic mouse embryonic NIH 3T3 fibroblast cells that produce limonene by introducing the D-limonene synthase gene obtained from Japanese catnip (Schizonepeta tenuifolia). Apoptosis was not observed in the limonene-producing cells. A concomitant increase in the level of apoptosis-related protein Bcl-2 (B-cell lymphoma protein 2) and decreases in the levels of Bad (Bcl-2 antagonist of cell death) and phosphorylated JNK (c-Jun N-terminal kinase) were observed in limonene-producing cells. Limonene-producing cells may provide a useful new system to investigate the in vivo function of this monoterpene.


Subject(s)
Apoptosis Regulatory Proteins/metabolism , Cyclohexenes/metabolism , Intramolecular Lyases/metabolism , Lamiaceae/enzymology , Terpenes/metabolism , Animals , Apoptosis , Apoptosis Regulatory Proteins/genetics , Cell Cycle , Cell Proliferation , Cloning, Molecular , Flow Cytometry , Gas Chromatography-Mass Spectrometry , Intramolecular Lyases/genetics , JNK Mitogen-Activated Protein Kinases/genetics , JNK Mitogen-Activated Protein Kinases/metabolism , Limonene , Mice , Mice, Transgenic , NIH 3T3 Cells , Plasmids , Proto-Oncogene Proteins c-bcl-2/genetics , Proto-Oncogene Proteins c-bcl-2/metabolism , Transfection , bcl-Associated Death Protein/genetics , bcl-Associated Death Protein/metabolism
18.
Phytochemistry ; 162: 121-128, 2019 Jun.
Article in English | MEDLINE | ID: mdl-30884256

ABSTRACT

Cedrol is an extremely versatile sesquiterpene alcohol that was approved by the Food and Drug Administration of the United States as a flavoring agent or adjuvant and has been commonly used as a flavoring ingredient in cosmetics, foods and medicine. Furthermore, cedrol possesses a wide range of pharmacological properties including sedative, anti-inflammatory and cytotoxic activities. Commercial production of cedrol relies on fractional distillation of cedar wood oils, followed by recrystallization, and little has been reported about its biosynthesis and aspects of synthetic biology. Here, we report the cloning and functional characterization of a cedrol synthase gene (Lc-CedS) from the transcriptome of the glandular trichomes of a woody Lamiaceae plant Leucosceptrum canum. The recombinant Lc-CedS protein catalyzed the in vitro conversion of farnesyl diphosphate into the single product cedrol, suggesting that Lc-CedS is a high-fidelity terpene synthase. Co-expression of Lc-CedS, a farnesyl diphosphate synthase gene and seven genes of the mevalonate (MVA) pathway responsible for converting acetyl-CoA into farnesyl diphosphate in Escherichia coli afforded 363 µg/L cedrol as the sole product under shaking flask conditions. Transient expression of Lc-CedS in Nicotiana benthamiana also resulted in a single product cedrol with a production level of 3.6 µg/g fresh weight. The sole production of cedrol by introducing of Lc-CedS in engineered E. coli and N. benthamiana suggests now alternative production systems using synthetic biology approaches that would better address sufficient supply of cedrol.


Subject(s)
Carbon-Carbon Lyases/genetics , Escherichia coli/metabolism , Lamiaceae/cytology , Lamiaceae/enzymology , Nicotiana/metabolism , Terpenes/metabolism , Trichomes/enzymology , Amino Acid Sequence , Carbon-Carbon Lyases/chemistry , Carbon-Carbon Lyases/metabolism , Cloning, Molecular , Escherichia coli/genetics , Genetic Engineering , Lamiaceae/genetics , Polycyclic Sesquiterpenes , Nicotiana/genetics
19.
Phytochemistry ; 156: 224-233, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30336442

ABSTRACT

In the plant kingdom beta-glucosidases (BGLUs) of the glycosidase hydrolase family 1 have essential function in primary metabolism and are particularly employed in secondary metabolism. They are essential for activation in two-component defence systems based on stabilisation of reactive compounds by glycosylation. Based on de novo assembly we isolated and functionally characterised BGLUs expressed in leaves of Lamium galeobdolon (LgGLUs). LgGLU1 could be assigned to hydrolysis of the benzoxazinoid GDIBOA (2,4-dihydroxy-1,4-benzoxazin-3-one glucoside). Within the Lamiaceae L. galeobdolon is distinguished by the presence GDIBOA in addition to the more common iridoid harpagide. Although LgGLU1 proved to be promiscuous with respect to accepted substrates, harpagide hydrolysis was not detected. Benzoxazinoids are characteristic defence compounds of the Poales but are also found in some unrelated dicots. The benzoxazinoid specific BGLUs have recently been identified for the grasses maize, wheat, rye and the Ranunculaceae Consolida orientalis. All enzymes share a general substrate ambiguity but differ in detailed substrate pattern. The isolation of the second dicot GDIBOA glucosidase LgGLU1 allowed it to analyse the phylogenetic relation of the distinct BGLUs also within dicots. The data revealed long periods of independent sequence evolution before speciation.


Subject(s)
Benzoxazines/metabolism , Cellulases/metabolism , Lamiaceae/enzymology , Benzoxazines/chemistry , Cellulases/isolation & purification , Glycosylation , Lamiaceae/metabolism
20.
Tree Physiol ; 26(8): 1067-73, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16651256

ABSTRACT

Carbonic anhydrase (CA, EC: 4.2.1.1) activity in teak (Tectona grandis L.f.) was studied to determine its characteristics, kinetics and isozyme patterns. We also investigated effects of leaf age, plant age and genotype on CA activity and gas exchange parameters. Carbonic anhydrase extracted from leaves in 12 mM veronal buffer, pH 7.8, had a K(m) for CO(2) of 15.20 mM and a V(max) of 35,448 U mg(-1) chlorophyll min(-1), which values declined by 50 and 70%, respectively, after 1 week of storage at 4 degrees C. A 15% native polyacrylamide gel revealed the absence of CA isozymes in teak, with only a single CA band of 45 kD molecular mass observed across 10 segregating half-sib families and groups of trees ranging in age from 10 to 25 years. Activity remained stable during the first month in storage at 0 degrees C, but gradually declined to 25% of the initial value after 1 year in storage. During the period of active growth (February-May), maximal CA activity was observed in fully expanded and illuminated leaves. Significant variation was observed in CA activity across 10 1-year-old half-sib families and 21 5-year-old half-sib families. There was a positive correlation between CA activity and photosynthetic rate in a population of 10-year-old trees (P < 0.005). Positive correlations between CA activity and photosynthetic rate were found in 10 of 21 5-year-old half-sib families (P < 0.005 to P < 0.05), which showed greater diversity in CA activity than in photosynthetic characteristics. Thus, CA may serve as a biochemical marker for photosynthetic capacity in teak genotypes.


Subject(s)
Carbonic Anhydrases/metabolism , Lamiaceae/enzymology , Photosynthesis/physiology , Enzyme Stability , Isoenzymes/metabolism , Kinetics , Plant Leaves/enzymology , Seasons , Time Factors
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