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1.
Annu Rev Microbiol ; 74: 633-654, 2020 09 08.
Article in English | MEDLINE | ID: mdl-32689916

ABSTRACT

Photosynthetic membranes are typically densely packed with proteins, and this is crucial for their function in efficient trapping of light energy. Despite being crowded with protein, the membranes are fluid systems in which proteins and smaller molecules can diffuse. Fluidity is also crucial for photosynthetic function, as it is essential for biogenesis, electron transport, and protein redistribution for functional regulation. All photosynthetic membranes seem to maintain a delicate balance between crowding, order, and fluidity. How does this work in phototrophic bacteria? In this review, we focus on two types of intensively studied bacterial photosynthetic membranes: the chromatophore membranes of purple bacteria and the thylakoid membranes of cyanobacteria. Both systems are distinct from the plasma membrane, and both have a distinctive protein composition that reflects their specialized roles. Chromatophores are formed from plasma membrane invaginations, while thylakoid membranes appear to be an independent intracellular membrane system. We discuss the techniques that can be applied to study the organization and dynamics of these membrane systems, including electron microscopy techniques, atomic force microscopy, and many variants of fluorescence microscopy. We go on to discuss the insights that havebeen acquired from these techniques, and the role of membrane dynamics in the physiology of photosynthetic membranes. Membrane dynamics on multiple timescales are crucial for membrane function, from electron transport on timescales of microseconds to milliseconds to regulation and biogenesis on timescales of minutes to hours. We emphasize the open questions that remain in the field.


Subject(s)
Bacterial Chromatophores/metabolism , Cyanobacteria/metabolism , Photosynthesis/physiology , Thylakoids/metabolism , Cyanobacteria/chemistry , Cyanobacteria/genetics , Electron Transport , Microscopy/classification , Microscopy/methods , Photosynthesis/genetics , Thylakoids/chemistry
2.
Biochemistry ; 63(9): 1214-1224, 2024 05 07.
Article in English | MEDLINE | ID: mdl-38679935

ABSTRACT

A central goal of photoprotective energy dissipation processes is the regulation of singlet oxygen (1O2*) and reactive oxygen species in the photosynthetic apparatus. Despite the involvement of 1O2* in photodamage and cell signaling, few studies directly correlate 1O2* formation to nonphotochemical quenching (NPQ) or lack thereof. Here, we combine spin-trapping electron paramagnetic resonance (EPR) and time-resolved fluorescence spectroscopies to track in real time the involvement of 1O2* during photoprotection in plant thylakoid membranes. The EPR spin-trapping method for detection of 1O2* was first optimized for photosensitization in dye-based chemical systems and then used to establish methods for monitoring the temporal dynamics of 1O2* in chlorophyll-containing photosynthetic membranes. We find that the apparent 1O2* concentration in membranes changes throughout a 1 h period of continuous illumination. During an initial response to high light intensity, the concentration of 1O2* decreased in parallel with a decrease in the chlorophyll fluorescence lifetime via NPQ. Treatment of membranes with nigericin, an uncoupler of the transmembrane proton gradient, delayed the activation of NPQ and the associated quenching of 1O2* during high light. Upon saturation of NPQ, the concentration of 1O2* increased in both untreated and nigericin-treated membranes, reflecting the utility of excess energy dissipation in mitigating photooxidative stress in the short term (i.e., the initial ∼10 min of high light).


Subject(s)
Photosynthesis , Singlet Oxygen , Thylakoids , Electron Spin Resonance Spectroscopy/methods , Singlet Oxygen/metabolism , Singlet Oxygen/chemistry , Thylakoids/metabolism , Thylakoids/chemistry , Spin Trapping/methods , Chlorophyll/metabolism , Chlorophyll/chemistry , Spinacia oleracea/metabolism , Spinacia oleracea/chemistry , Light
3.
J Am Chem Soc ; 146(21): 14905-14914, 2024 May 29.
Article in English | MEDLINE | ID: mdl-38759103

ABSTRACT

The ability to harvest light effectively in a changing environment is necessary to ensure efficient photosynthesis and crop growth. One mechanism, known as qE, protects photosystem II (PSII) and regulates electron transfer through the harmless dissipation of excess absorbed photons as heat. This process involves reversible clustering of the major light-harvesting complexes of PSII (LHCII) in the thylakoid membrane and relies upon the ΔpH gradient and the allosteric modulator protein PsbS. To date, the exact role of PsbS in the qE mechanism has remained elusive. Here, we show that PsbS induces hydrophobic mismatch in the thylakoid membrane through dynamic rearrangement of lipids around LHCII leading to observed membrane thinning. We found that upon illumination, the thylakoid membrane reversibly shrinks from around 4.3 to 3.2 nm, without PsbS, this response is eliminated. Furthermore, we show that the lipid digalactosyldiacylglycerol (DGDG) is repelled from the LHCII-PsbS complex due to an increase in both the pKa of lumenal residues and in the dipole moment of LHCII, which allows for further conformational change and clustering in the membrane. Our results suggest a mechanistic role for PsbS as a facilitator of a hydrophobic mismatch-mediated phase transition between LHCII-PsbS and its environment. This could act as the driving force to sort LHCII into photoprotective nanodomains in the thylakoid membrane. This work shows an example of the key role of the hydrophobic mismatch process in regulating membrane protein function in plants.


Subject(s)
Hydrophobic and Hydrophilic Interactions , Light-Harvesting Protein Complexes , Photosynthesis , Photosystem II Protein Complex , Thylakoids , Thylakoids/metabolism , Thylakoids/chemistry , Light-Harvesting Protein Complexes/metabolism , Light-Harvesting Protein Complexes/chemistry , Photosystem II Protein Complex/metabolism , Photosystem II Protein Complex/chemistry , Galactolipids/metabolism , Galactolipids/chemistry , Light
4.
Photosynth Res ; 159(2-3): 133-152, 2024 Mar.
Article in English | MEDLINE | ID: mdl-37191762

ABSTRACT

Photo-induced triplet states in the thylakoid membranes isolated from the cyanobacterium Acaryocholoris marina, that harbours Chlorophyll (Chl) d as its main chromophore, have been investigated by Optically Detected Magnetic Resonance (ODMR) and time-resolved Electron Paramagnetic Resonance (TR-EPR). Thylakoids were subjected to treatments aimed at poising the redox state of the terminal electron transfer acceptors and donors of Photosystem II (PSII) and Photosystem I (PSI), respectively. Under ambient redox conditions, four Chl d triplet populations were detectable, identifiable by their characteristic zero field splitting parameters, after deconvolution of the Fluorescence Detected Magnetic Resonance (FDMR) spectra. Illumination in the presence of the redox mediator N,N,N',N'-Tetramethyl-p-phenylenediamine (TMPD) and sodium ascorbate at room temperature led to a redistribution of the triplet populations, with T3 (|D|= 0.0245 cm-1, |E|= 0.0042 cm-1) becoming dominant and increasing in intensity with respect to untreated samples. A second triplet population (T4, |D|= 0.0248 cm-1, |E|= 0.0040 cm-1) having an intensity ratio of about 1:4 with respect to T3 was also detectable after illumination in the presence of TMPD and ascorbate. The microwave-induced Triplet-minus-Singlet spectrum acquired at the maximum of the |D|-|E| transition (610 MHz) displays a broad minimum at 740 nm, accompanied by a set of complex spectral features that overall resemble, despite showing further fine spectral structure, the previously reported Triplet-minus-Singlet spectrum attributed to the recombination triplet of PSI reaction centre, 3 P 740 [Schenderlein M, Çetin M, Barber J, et al. Spectroscopic studies of the chlorophyll d containing photosystem I from the cyanobacterium Acaryochloris marina. Biochim Biophys Acta 1777:1400-1408]. However, TR-EPR experiments indicate that this triplet displays an eaeaea electron spin polarisation pattern which is characteristic of triplet sublevels populated by intersystem crossing rather than recombination, for which an aeeaae polarisation pattern is expected instead. It is proposed that the observed triplet, which leads to the bleaching of the P740 singlet state, sits on the PSI reaction centre.


Subject(s)
Cyanobacteria , Photosystem I Protein Complex , Thylakoids , Thylakoids/chemistry , Photosystem I Protein Complex/chemistry , Chlorophyll/chemistry , Photosystem II Protein Complex/chemistry , Electron Spin Resonance Spectroscopy
5.
J Biol Chem ; 298(11): 102519, 2022 11.
Article in English | MEDLINE | ID: mdl-36152752

ABSTRACT

Plants and algae are faced with a conundrum: harvesting sufficient light to drive their metabolic needs while dissipating light in excess to prevent photodamage, a process known as nonphotochemical quenching. A slowly relaxing form of energy dissipation, termed qH, is critical for plants' survival under abiotic stress; however, qH location in the photosynthetic membrane is unresolved. Here, we tested whether we could isolate subcomplexes from plants in which qH was induced that would remain in an energy-dissipative state. Interestingly, we found that chlorophyll (Chl) fluorescence lifetimes were decreased by qH in isolated major trimeric antenna complexes, indicating that they serve as a site for qH-energy dissipation and providing a natively quenched complex with physiological relevance to natural conditions. Next, we monitored the changes in thylakoid pigment, protein, and lipid contents of antenna with active or inactive qH but did not detect any evident differences. Finally, we investigated whether specific subunits of the major antenna complexes were required for qH but found that qH was insensitive to trimer composition. Because we previously observed that qH can occur in the absence of specific xanthophylls, and no evident changes in pigments, proteins, or lipids were detected, we tentatively propose that the energy-dissipative state reported here may stem from Chl-Chl excitonic interaction.


Subject(s)
Chlorophyll , Light-Harvesting Protein Complexes , Photosystem II Protein Complex , Plants , Chlorophyll/chemistry , Light , Light-Harvesting Protein Complexes/chemistry , Photosynthesis , Photosystem II Protein Complex/chemistry , Plants/chemistry , Thylakoids/chemistry , Xanthophylls/chemistry
6.
Cell ; 132(2): 273-85, 2008 Jan 25.
Article in English | MEDLINE | ID: mdl-18243102

ABSTRACT

During photosynthesis, two photoreaction centers located in the thylakoid membranes of the chloroplast, photosystems I and II (PSI and PSII), use light energy to mobilize electrons to generate ATP and NADPH. Different modes of electron flow exist, of which the linear electron flow is driven by PSI and PSII, generating ATP and NADPH, whereas the cyclic electron flow (CEF) only generates ATP and is driven by the PSI alone. Different environmental and metabolic conditions require the adjustment of ATP/NADPH ratios and a switch of electron distribution between the two photosystems. With the exception of PGR5, other components facilitating CEF are unknown. Here, we report the identification of PGRL1, a transmembrane protein present in thylakoids of Arabidopsis thaliana. Plants lacking PGRL1 show perturbation of CEF, similar to PGR5-deficient plants. We find that PGRL1 and PGR5 interact physically and associate with PSI. We therefore propose that the PGRL1-PGR5 complex facilitates CEF in eukaryotes.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Membrane Proteins/metabolism , Photosynthetic Reaction Center Complex Proteins/metabolism , Photosystem I Protein Complex/metabolism , Thylakoids/chemistry , Adenosine Triphosphate/biosynthesis , Amino Acid Sequence , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis Proteins/chemistry , Arabidopsis Proteins/genetics , Chloroplasts/metabolism , DNA, Plant/genetics , DNA, Plant/isolation & purification , Electron Transport , Gene Expression Regulation, Plant , Genes, Plant , Kinetics , Membrane Proteins/chemistry , Membrane Proteins/genetics , Models, Biological , Molecular Sequence Data , Mutation , NADP/biosynthesis , Oxidation-Reduction , Photosynthetic Reaction Center Complex Proteins/genetics , Plastoquinone/metabolism , Protein Isoforms/chemistry , Protein Isoforms/genetics , Protein Isoforms/metabolism , Protein Structure, Secondary , Protein Structure, Tertiary , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/metabolism , Sequence Homology, Amino Acid , Subcellular Fractions/metabolism
7.
Proc Natl Acad Sci U S A ; 117(45): 28036-28045, 2020 11 10.
Article in English | MEDLINE | ID: mdl-33106422

ABSTRACT

Photosynthetic O2 evolution is catalyzed by the Mn4CaO5 cluster of the water oxidation complex of the photosystem II (PSII) complex. The photooxidative self-assembly of the Mn4CaO5 cluster, termed photoactivation, utilizes the same highly oxidizing species that drive the water oxidation in order to drive the incorporation of Mn2+ into the high-valence Mn4CaO5 cluster. This multistep process proceeds with low quantum efficiency, involves a molecular rearrangement between light-activated steps, and is prone to photoinactivation and misassembly. A sensitive polarographic technique was used to track the assembly process under flash illumination as a function of the constituent Mn2+ and Ca2+ ions in genetically engineered membranes of the cyanobacterium Synechocystis sp. PCC6803 to elucidate the action of Ca2+ and peripheral proteins. We show that the protein scaffolding organizing this process is allosterically modulated by the assembly protein Psb27, which together with Ca2+ stabilizes the intermediates of photoactivation, a feature especially evident at long intervals between photoactivating flashes. The results indicate three critical metal-binding sites: two Mn and one Ca, with occupation of the Ca site by Ca2+ critical for the suppression of photoinactivation. The long-observed competition between Mn2+ and Ca2+ occurs at the second Mn site, and its occupation by competing Ca2+ slows the rearrangement. The relatively low overall quantum efficiency of photoactivation is explained by the requirement of correct occupancy of these metal-binding sites coupled to a slow restructuring of the protein ligation environment, which are jointly necessary for the photooxidative trapping of the first stable assembly intermediate.


Subject(s)
Calcium/metabolism , Oxygen/metabolism , Photosynthesis/physiology , Photosystem II Protein Complex/metabolism , Water/metabolism , Manganese/metabolism , Metalloproteins/chemistry , Metalloproteins/metabolism , Oxidation-Reduction , Photosystem II Protein Complex/chemistry , Protein Conformation , Synechocystis/metabolism , Thylakoids/chemistry , Thylakoids/metabolism
8.
Biophys J ; 121(18): 3411-3421, 2022 09 20.
Article in English | MEDLINE | ID: mdl-35986519

ABSTRACT

The inner membrane-associated protein of 30 kDa (IM30) is essential in chloroplasts and cyanobacteria. The spatio-temporal cellular localization of the protein appears to be highly dynamic and triggered by internal as well as external stimuli, mainly light intensity. The soluble fraction of the protein is localized in the cyanobacterial cytoplasm or the chloroplast stroma, respectively. Additionally, the protein attaches to the thylakoid membrane as well as to the chloroplast inner envelope or the cyanobacterial cytoplasmic membrane, respectively, especially under conditions of membrane stress. IM30 is involved in thylakoid membrane biogenesis and/or maintenance, where it either stabilizes membranes and/or triggers membrane-fusion processes. These apparently contradicting functions have to be tightly controlled and separated spatiotemporally in chloroplasts and cyanobacteria. IM30's fusogenic activity depends on Mg2+ binding to IM30; yet, it still is unclear how Mg2+-loaded IM30 interacts with membranes and promotes membrane fusion. Here, we show that the interaction of Mg2+ with IM30 results in increased binding of IM30 to native, as well as model, membranes. Via atomic force microscopy in liquid, IM30-induced bilayer defects were observed in solid-supported bilayers in the presence of Mg2+. These structures differ dramatically from the membrane-stabilizing carpet structures that were previously observed in the absence of Mg2+. Thus, Mg2+-induced alterations of the IM30 structure switch the IM30 activity from a membrane-stabilizing to a membrane-destabilizing function, a crucial step in membrane fusion.


Subject(s)
Synechocystis , Chloroplasts/metabolism , Membrane Fusion , Membrane Proteins/chemistry , Synechocystis/metabolism , Thylakoids/chemistry
9.
J Biol Chem ; 296: 100217, 2021.
Article in English | MEDLINE | ID: mdl-33839679

ABSTRACT

Heme oxygenase (HO) converts heme to carbon monoxide, biliverdin, and free iron, products that are essential in cellular redox signaling and iron recycling. In higher plants, HO is also involved in the biosynthesis of photoreceptor pigment precursors. Despite many common enzymatic reactions, the amino acid sequence identity between plant-type and other HOs is exceptionally low (∼19.5%), and amino acids that are catalytically important in mammalian HO are not conserved in plant-type HOs. Structural characterization of plant-type HO is limited to spectroscopic characterization by electron spin resonance, and it remains unclear how the structure of plant-type HO differs from that of other HOs. Here, we have solved the crystal structure of Glycine max (soybean) HO-1 (GmHO-1) at a resolution of 1.06 Å and carried out the isothermal titration calorimetry measurements and NMR spectroscopic studies of its interaction with ferredoxin, the plant-specific electron donor. The high-resolution X-ray structure of GmHO-1 reveals several novel structural components: an additional irregularly structured region, a new water tunnel from the active site to the surface, and a hydrogen-bonding network unique to plant-type HOs. Structurally important features in other HOs, such as His ligation to the bound heme, are conserved in GmHO-1. Based on combined data from X-ray crystallography, isothermal titration calorimetry, and NMR measurements, we propose the evolutionary fine-tuning of plant-type HOs for ferredoxin dependency in order to allow adaptation to dynamic pH changes on the stroma side of the thylakoid membrane in chloroplast without losing enzymatic activity under conditions of fluctuating light.


Subject(s)
Ferredoxins/chemistry , Glycine max/chemistry , Heme Oxygenase-1/chemistry , Heme/chemistry , Iron/chemistry , Plant Proteins/chemistry , Amino Acid Sequence , Biliverdine/chemistry , Biliverdine/metabolism , Carbon Monoxide/chemistry , Carbon Monoxide/metabolism , Catalytic Domain , Chloroplasts/chemistry , Chloroplasts/enzymology , Cloning, Molecular , Crystallography, X-Ray , Escherichia coli/genetics , Escherichia coli/metabolism , Ferredoxins/genetics , Ferredoxins/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Heme/metabolism , Heme Oxygenase-1/genetics , Heme Oxygenase-1/metabolism , Hydrogen Bonding , Iron/metabolism , Molecular Docking Simulation , Nuclear Magnetic Resonance, Biomolecular , Plant Proteins/genetics , Plant Proteins/metabolism , Protein Binding , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Glycine max/enzymology , Glycine max/genetics , Thylakoids/chemistry , Thylakoids/enzymology
10.
Photosynth Res ; 152(3): 275-281, 2022 Jun.
Article in English | MEDLINE | ID: mdl-35303236

ABSTRACT

Photoprotection by non-photochemical quenching is important for optimal growth and development, especially during dynamic changes of the light intensity. The main component responsible for energy dissipation is called qE. It has been proposed that qE involves the reorganization of the photosynthetic complexes and especially of Photosystem II. However, despite a number of studies, there are still contradictory results concerning the structural changes in PSII during qE induction. The main limitation in addressing this point is the very fast nature of the off switch of qE, since the illumination is usually performed in folio and the preparation of the thylakoids requires a dark period. To avoid qE relaxation during thylakoid isolation, in this work quenching was induced directly on isolated and functional thylakoids that were then solubilized in the light. The analysis of the quenched thylakoids in native gel showed only a small decrease in the large PSII supercomplexes (C2S2M2/C2S2M) which is most likely due to photoinhibition/light acclimation since it does not recover in the dark. This result indicates that qE rise is not accompanied by a structural disassembly of the PSII supercomplexes.


Subject(s)
Light-Harvesting Protein Complexes , Thylakoids , Light , Light-Harvesting Protein Complexes/chemistry , Photosystem II Protein Complex/chemistry , Thylakoids/chemistry
11.
J Struct Biol ; 213(3): 107746, 2021 09.
Article in English | MEDLINE | ID: mdl-34010667

ABSTRACT

A long-standing challenge in cell biology is elucidating the structure and spatial distribution of individual membrane-bound proteins, protein complexes and their interactions in their native environment. Here, we describe a workflow that combines on-grid immunogold labeling, followed by cryo-electron tomography (cryoET) imaging and structural analyses to identify and characterize the structure of photosystem II (PSII) complexes. Using an antibody specific to a core subunit of PSII, the D1 protein (uniquely found in the water splitting complex in all oxygenic photoautotrophs), we identified PSII complexes in biophysically active thylakoid membranes isolated from a model marine diatom Phaeodactylum tricornutum. Subsequent cryoET analyses of these protein complexes resolved two PSII structures: supercomplexes and dimeric cores. Our integrative approach establishes the structural signature of multimeric membrane protein complexes in their native environment and provides a pathway to elucidate their high-resolution structures.


Subject(s)
Diatoms , Thylakoids , Diatoms/metabolism , Electron Microscope Tomography , Light-Harvesting Protein Complexes/analysis , Light-Harvesting Protein Complexes/chemistry , Light-Harvesting Protein Complexes/metabolism , Photosystem II Protein Complex/analysis , Photosystem II Protein Complex/chemistry , Photosystem II Protein Complex/metabolism , Thylakoids/chemistry , Thylakoids/metabolism
12.
J Biol Chem ; 295(43): 14537-14545, 2020 10 23.
Article in English | MEDLINE | ID: mdl-32561642

ABSTRACT

An intriguing molecular architecture called the "semi-crystalline photosystem II (PSII) array" has been observed in the thylakoid membranes in vascular plants. It is an array of PSII-light-harvesting complex II (LHCII) supercomplexes that only appears in low light, but its functional role has not been clarified. Here, we identified PSII-LHCII supercomplexes in their monomeric and multimeric forms in low light-acclimated spinach leaves and prepared them using sucrose-density gradient ultracentrifugation in the presence of amphipol A8-35. When the leaves were acclimated to high light, only the monomeric forms were present, suggesting that the multimeric forms represent a structural adaptation to low light and that disaggregation of the PSII-LHCII supercomplex represents an adaptation to high light. Single-particle EM revealed that the multimeric PSII-LHCII supercomplexes are composed of two ("megacomplex") or three ("arraycomplex") units of PSII-LHCII supercomplexes, which likely constitute a fraction of the semi-crystalline PSII array. Further characterization with fluorescence analysis revealed that multimeric forms have a higher light-harvesting capability but a lower thermal dissipation capability than the monomeric form. These findings suggest that the configurational conversion of PSII-LHCII supercomplexes may serve as a structural basis for acclimation of plants to environmental light.


Subject(s)
Chlamydomonas reinhardtii/chemistry , Light-Harvesting Protein Complexes/chemistry , Photosystem II Protein Complex/chemistry , Plant Leaves/chemistry , Acclimatization , Chlamydomonas reinhardtii/physiology , Light , Light-Harvesting Protein Complexes/metabolism , Light-Harvesting Protein Complexes/ultrastructure , Photosystem II Protein Complex/metabolism , Photosystem II Protein Complex/ultrastructure , Plant Leaves/physiology , Protein Conformation , Protein Multimerization , Thylakoids/chemistry , Thylakoids/metabolism
13.
J Am Chem Soc ; 143(42): 17577-17586, 2021 10 27.
Article in English | MEDLINE | ID: mdl-34648708

ABSTRACT

Plants use energy from the sun yet also require protection against the generation of deleterious photoproducts from excess energy. Photoprotection in green plants, known as nonphotochemical quenching (NPQ), involves thermal dissipation of energy and is activated by a series of interrelated factors: a pH drop in the lumen, accumulation of the carotenoid zeaxanthin (Zea), and formation of arrays of pigment-containing antenna complexes. However, understanding their individual contributions and their interactions has been challenging, particularly for the antenna arrays, which are difficult to manipulate in vitro. Here, we achieved systematic and discrete control over the array size for the principal antenna complex, light-harvesting complex II, using near-native in vitro membranes called nanodiscs. Each of the factors had a distinct influence on the level of dissipation, which was characterized by measurements of fluorescence quenching and ultrafast chlorophyll-to-carotenoid energy transfer. First, an increase in array size led to a corresponding increase in dissipation; the dramatic changes in the chlorophyll dynamics suggested that this is due to an allosteric conformational change of the protein. Second, a pH drop increased dissipation but exclusively in the presence of protein-protein interactions. Third, no Zea dependence was identified which suggested that Zea regulates a distinct aspect of NPQ. Collectively, these results indicate that each factor provides a separate type of control knob for photoprotection, which likely enables a flexible and tunable response to solar fluctuations.


Subject(s)
Light-Harvesting Protein Complexes/metabolism , Zeaxanthins/metabolism , Carotenoids/metabolism , Chlorophyll/metabolism , Energy Transfer , Hydrogen-Ion Concentration , Light , Light-Harvesting Protein Complexes/radiation effects , Nanostructures/chemistry , Protein Binding , Protein Multimerization , Spinacia oleracea/chemistry , Thylakoids/chemistry , Thylakoids/metabolism , Xanthophylls/metabolism
14.
J Biol Inorg Chem ; 26(1): 1-11, 2021 02.
Article in English | MEDLINE | ID: mdl-33146770

ABSTRACT

The interaction of Tb3+ and La3+ cations with different photosystem II (PSII) membranes (intact PSII, Ca-depleted PSII (PSII[-Ca]) and Mn-depleted PSII (PSII[-Mn]) membranes) was studied. Although both lanthanide cations (Ln3+) interact only with Ca2+-binding site of oxygen-evolving complex (OEC) in PSII and PSII(-Ca) membranes, we found that in PSII(-Mn) membranes both Ln3+ ions tightly bind to another site localized on the oxidizing side of PSII. Binding of Ln3+ cations to this site is not protected by Ca2+ and is accompanied by very effective inhibition of Mn2+ oxidation at the high-affinity (HA) Mn-binding site ([Mn2+ + H2O2] couple was used as a donor of electrons). The values of the constant for inhibition of electron transport Ki are equal to 2.10 ± 0.03 µM for Tb3+ and 8.3 ± 0.4 µM for La3+, whereas OEC inhibition constant in the native PSII membranes is 323 ± 7 µM for Tb3+. The value of Ki for Tb3+ corresponds to Ki for Mn2+ cations in the reaction of diphenylcarbazide oxidation via HA site (1.5 µM) presented in the literature. Our results suggest that Ln3+ cations bind to the HA Mn-binding site in PSII(-Mn) membranes like Mn2+ or Fe2+ cations. Taking into account the fact that Mn2+ and Fe2+ cations bind to the HA site as trivalent cations after light-induced oxidation and the fact that Mn cation bound to the HA site (Mn4) is also in trivalent state, we can suggest that valency may be important for the interaction of Ln3+ with the HA site.


Subject(s)
Lanthanum/metabolism , Photosystem II Protein Complex/metabolism , Terbium/metabolism , 2,6-Dichloroindophenol/chemistry , Binding Sites , Calcium/metabolism , Electron Transport/drug effects , Electron Transport/radiation effects , Kinetics , Light , Manganese/metabolism , Oxidation-Reduction/drug effects , Oxygen/metabolism , Photosystem II Protein Complex/chemistry , Plant Proteins/metabolism , Protein Binding , Spinacia oleracea/enzymology , Thylakoids/chemistry
15.
Proc Natl Acad Sci U S A ; 115(14): 3722-3727, 2018 04 03.
Article in English | MEDLINE | ID: mdl-29555769

ABSTRACT

Photosynthetic organisms are frequently exposed to light intensities that surpass the photosynthetic electron transport capacity. Under these conditions, the excess absorbed energy can be transferred from excited chlorophyll in the triplet state (3Chl*) to molecular O2, which leads to the production of harmful reactive oxygen species. To avoid this photooxidative stress, photosynthetic organisms must respond to excess light. In the green alga Chlamydomonas reinhardtii, the fastest response to high light is nonphotochemical quenching, a process that allows safe dissipation of the excess energy as heat. The two proteins, UV-inducible LHCSR1 and blue light-inducible LHCSR3, appear to be responsible for this function. While the LHCSR3 protein has been intensively studied, the role of LHCSR1 has been only partially elucidated. To investigate the molecular functions of LHCSR1 in C. reinhardtii, we performed biochemical and spectroscopic experiments and found that the protein mediates excitation energy transfer from light-harvesting complexes for Photosystem II (LHCII) to Photosystem I (PSI), rather than Photosystem II, at a low pH. This altered excitation transfer allows remarkable fluorescence quenching under high light. Our findings suggest that there is a PSI-dependent photoprotection mechanism that is facilitated by LHCSR1.


Subject(s)
Chlamydomonas reinhardtii/metabolism , Fluorescence , Light-Harvesting Protein Complexes/metabolism , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Algal Proteins/chemistry , Algal Proteins/genetics , Algal Proteins/metabolism , Chlamydomonas reinhardtii/radiation effects , Electron Transport , Energy Transfer , Hydrogen-Ion Concentration , Light , Light-Harvesting Protein Complexes/chemistry , Light-Harvesting Protein Complexes/genetics , Photosynthesis , Photosystem I Protein Complex/chemistry , Photosystem I Protein Complex/genetics , Photosystem II Protein Complex/chemistry , Photosystem II Protein Complex/genetics , Thylakoids/chemistry , Thylakoids/metabolism
16.
Int J Mol Sci ; 22(6)2021 Mar 15.
Article in English | MEDLINE | ID: mdl-33804002

ABSTRACT

Antenna protein aggregation is one of the principal mechanisms considered effective in protecting phototrophs against high light damage. Commonly, it is induced, in vitro, by decreasing detergent concentration and pH of a solution of purified antennas; the resulting reduction in fluorescence emission is considered to be representative of non-photochemical quenching in vivo. However, little is known about the actual size and organization of antenna particles formed by this means, and hence the physiological relevance of this experimental approach is questionable. Here, a quasi-single molecule method, fluorescence correlation spectroscopy (FCS), was applied during in vitro quenching of LHCII trimers from higher plants for a parallel estimation of particle size, fluorescence, and antenna cluster homogeneity in a single measurement. FCS revealed that, below detergent critical micelle concentration, low pH promoted the formation of large protein oligomers of sizes up to micrometers, and therefore is apparently incompatible with thylakoid membranes. In contrast, LHCII clusters formed at high pH were smaller and homogenous, and yet still capable of efficient quenching. The results altogether set the physiological validity limits of in vitro quenching experiments. Our data also support the idea that the small, moderately quenching LHCII oligomers found at high pH could be relevant with respect to non-photochemical quenching in vivo.


Subject(s)
Antennapedia Homeodomain Protein/genetics , Light-Harvesting Protein Complexes/genetics , Phototrophic Processes/genetics , Protein Aggregates/genetics , Antennapedia Homeodomain Protein/chemistry , Chlorophyll/chemistry , Chlorophyll/genetics , Chlorophyll/radiation effects , Cluster Analysis , Fluorescence , Hydrogen-Ion Concentration , Light/adverse effects , Light-Harvesting Protein Complexes/chemistry , Photosynthesis/genetics , Photosystem II Protein Complex/genetics , Photosystem II Protein Complex/radiation effects , Spectrometry, Fluorescence , Thylakoids/chemistry , Thylakoids/genetics , Thylakoids/radiation effects , Zeaxanthins/genetics
17.
Photosynth Res ; 145(3): 237-258, 2020 Sep.
Article in English | MEDLINE | ID: mdl-33017036

ABSTRACT

Microscopic studies of chloroplasts can be traced back to the year 1678 when Antonie van Leeuwenhoek reported to the Royal Society in London that he saw green globules in grass leaf cells with his single-lens microscope. Since then, microscopic studies have continued to contribute critical insights into the complex architecture of chloroplast membranes and how their structure relates to function. This review is organized into three chronological sections: During the classic light microscope period (1678-1940), the development of improved microscopes led to the identification of green grana, a colorless stroma, and a membrane envelope. More recent (1990-2020) chloroplast dynamic studies have benefited from laser confocal and 3D-structured illumination microscopy. The development of the transmission electron microscope (1940-2000) and thin sectioning techniques demonstrated that grana consist of stacks of closely appressed grana thylakoids interconnected by non-appressed stroma thylakoids. When the stroma thylakoids were shown to spiral around the grana stacks as multiple right-handed helices, it was confirmed that the membranes of a chloroplast are all interconnected. Freeze-fracture and freeze-etch methods verified the helical nature of the stroma thylakoids, while also providing precise information on how the electron transport chain and ATP synthase complexes are non-randomly distributed between grana and stroma membrane regions. The last section (2000-2020) focuses on the most recent discoveries made possible by atomic force microscopy of hydrated membranes, and electron tomography and cryo-electron tomography of cryofixed thylakoids. These investigations have provided novel insights into thylakoid architecture and plastoglobules (summarized in a new thylakoid model), while also producing molecular-scale views of grana and stroma thylakoids in which individual functional complexes can be identified.


Subject(s)
Microscopy/history , Plant Cells/physiology , Plants/classification , Thylakoids/ultrastructure , History, 17th Century , History, 18th Century , History, 19th Century , History, 20th Century , History, 21st Century , Microscopy/methods , Thylakoids/chemistry , Thylakoids/physiology
18.
Photosynth Res ; 144(2): 273-295, 2020 May.
Article in English | MEDLINE | ID: mdl-32297102

ABSTRACT

Photosynthesis is regulated by a dynamic interplay between proteins, enzymes, pigments, lipids, and cofactors that takes place on a large spatio-temporal scale. Molecular dynamics (MD) simulations provide a powerful toolkit to investigate dynamical processes in (bio)molecular ensembles from the (sub)picosecond to the (sub)millisecond regime and from the Å to hundreds of nm length scale. Therefore, MD is well suited to address a variety of questions arising in the field of photosynthesis research. In this review, we provide an introduction to the basic concepts of MD simulations, at atomistic and coarse-grained level of resolution. Furthermore, we discuss applications of MD simulations to model photosynthetic systems of different sizes and complexity and their connection to experimental observables. Finally, we provide a brief glance on which methods provide opportunities to capture phenomena beyond the applicability of classical MD.


Subject(s)
Molecular Dynamics Simulation , Photosynthesis/physiology , Thylakoids/chemistry , Light-Harvesting Protein Complexes/chemistry , Light-Harvesting Protein Complexes/metabolism , Photosystem II Protein Complex/chemistry , Photosystem II Protein Complex/metabolism , Quantum Theory , Thylakoids/metabolism , Workflow
19.
Photosynth Res ; 144(2): 195-208, 2020 May.
Article in English | MEDLINE | ID: mdl-32266611

ABSTRACT

Non-photochemical quenching (NPQ) in photosynthetic organisms provides the necessary photoprotection that allows them to cope with largely and quickly varying light intensities. It involves deactivation of excited states mainly at the level of the antenna complexes of photosystem II using still largely unknown molecular mechanisms. In higher plants the main contribution to NPQ is the so-called qE-quenching, which can be switched on and off in a few seconds. This quenching mechanism is affected by the low pH-induced activation of the small membrane protein PsbS which interacts with the major light-harvesting complex of photosystem II (LHCII). We are reporting here on a mechanistic study of the PsbS-induced LHCII quenching using ultrafast time-resolved chlorophyll (Chl) fluorescence. It is shown that the PsbS/LHCII interaction in reconstituted proteoliposomes induces highly effective and specific quenching of the LHCII excitation by a factor ≥ 20 via Chl-Chl charge-transfer (CT) state intermediates which are weakly fluorescent. Their characteristics are very broad fluorescence bands pronouncedly red-shifted from the typical unquenched LHCII fluorescence maximum. The observation of PsbS-induced Chl-Chl CT-state emission from LHCII in the reconstituted proteoliposomes is highly reminiscent of the in vivo quenching situation and also of LHCII quenching in vitro in aggregated LHCII, indicating a similar quenching mechanism in all those situations. The PsbS mutant lacking the two proton sensing Glu residues induced significant, but much smaller, quenching than wild type. Added zeaxanthin had only minor effects on the yield of quenching in the proteoliposomes. Overall our study shows that PsbS co-reconstituted with LHCII in liposomes represents an excellent in vitro model system with characteristics that are reflecting closely the in vivo qE-quenching situation.


Subject(s)
Arabidopsis Proteins/chemistry , Arabidopsis/chemistry , Light-Harvesting Protein Complexes/chemistry , Photosystem II Protein Complex/chemistry , Proteolipids/chemistry , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Chlorophyll/chemistry , Chlorophyll/metabolism , Fluorescence , Hydrogen-Ion Concentration , Light-Harvesting Protein Complexes/genetics , Light-Harvesting Protein Complexes/metabolism , Mutation , Photosystem II Protein Complex/genetics , Photosystem II Protein Complex/metabolism , Spectrometry, Fluorescence , Thylakoids/chemistry , Zeaxanthins/chemistry
20.
Photosynth Res ; 144(2): 261-272, 2020 May.
Article in English | MEDLINE | ID: mdl-32076914

ABSTRACT

The phycobilisome (PBS) serves as the major light-harvesting system, funnelling excitation energy to both photosystems (PS) in cyanobacteria and red algae. The picosecond kinetics involving the excitation energy transfer has been studied within the isolated systems and intact filaments of the cyanobacterium Anabaena variabilis PCC 7120. A target model is proposed which resolves the dynamics of the different chromophore groups. The energy transfer rate of 8.5 ± 1.0/ns from the rod to the core is the rate-limiting step, both in vivo and in vitro. The PBS-PSI-PSII supercomplex reveals efficient excitation energy migration from the low-energy allophycocyanin, which is the terminal emitter, in the PBS core to the chlorophyll a in the photosystems. The terminal emitter of the phycobilisome transfers energy to both PSI and PSII with a rate of 50 ± 10/ns, equally distributing the solar energy to both photosystems. Finally, the excitation energy is trapped by charge separation in the photosystems with trapping rates estimated to be 56 ± 6/ns in PSI and 14 ± 2/ns in PSII.


Subject(s)
Anabaena variabilis/chemistry , Anabaena variabilis/metabolism , Photosystem I Protein Complex/chemistry , Phycobilisomes/chemistry , Chlorophyll A/chemistry , Chlorophyll A/metabolism , Energy Transfer , Models, Theoretical , Photosystem I Protein Complex/isolation & purification , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/chemistry , Photosystem II Protein Complex/metabolism , Phycobilisomes/isolation & purification , Phycobilisomes/metabolism , Spectrometry, Fluorescence , Spectrum Analysis/methods , Thylakoids/chemistry
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