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1.
J Neurovirol ; 30(3): 251-265, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38842651

RESUMO

Japanese Encephalitis remains a significant global health concern, contributing to millions of deaths annually worldwide. Microglial cells, as key innate immune cells within the central nervous system (CNS), exhibit intricate cellular structures and possess molecular phenotypic plasticity, playing pivotal roles in immune responses during CNS viral infections. Particularly under viral inflammatory conditions, microglial cells orchestrate innate and adaptive immune responses to mitigate viral invasion and dampen inflammatory reactions. This review article comprehensively summarizes the pathophysiology of viral invasion into the CNS and the cellular interactions involved, elucidating the roles of various immune mediators, including pro-inflammatory cytokines, in neuroinflammation. Leveraging this knowledge, strategies for modulating inflammatory responses and attenuating hyperactivation of glial cells to mitigate viral replication within the brain are discussed. Furthermore, current chemotherapeutic and antiviral drugs are examined, elucidating their mechanisms of action against viral replication. This review aims to provide insights into therapeutic interventions for Japanese Encephalitis and related viral infections, ultimately contributing to improved outcomes for affected individuals.


Assuntos
Citocinas , Vírus da Encefalite Japonesa (Espécie) , Encefalite Japonesa , Microglia , Humanos , Encefalite Japonesa/imunologia , Encefalite Japonesa/virologia , Encefalite Japonesa/patologia , Encefalite Japonesa/tratamento farmacológico , Encefalite Japonesa/terapia , Vírus da Encefalite Japonesa (Espécie)/imunologia , Vírus da Encefalite Japonesa (Espécie)/patogenicidade , Citocinas/imunologia , Microglia/imunologia , Microglia/virologia , Microglia/patologia , Animais , Antivirais/uso terapêutico , Replicação Viral/imunologia , Imunidade Inata , Imunoterapia/métodos , Encéfalo/virologia , Encéfalo/imunologia , Encéfalo/patologia , Doenças Neuroinflamatórias/imunologia , Doenças Neuroinflamatórias/virologia , Doenças Neuroinflamatórias/patologia , Doenças Neuroinflamatórias/tratamento farmacológico
2.
Ann Hematol ; 2024 Sep 27.
Artigo em Inglês | MEDLINE | ID: mdl-39327314

RESUMO

Chronic myeloid leukemia (CML) is a malignant clonal disorder of the hematopoietic stem cells characterized by the aberrant production and uncontrolled proliferation of mature granulocytes with normal cell differentiation. The Philadelphia (Ph) chromosome resulting from reciprocal translocation between chromosomes 9 and 22 is the main genetic molecular hallmark of CML seen in more than 90% of the patients. However, about 5-10% of CML patients show a variant genetic rearrangement, involving one or more chromosomes in addition to 9 and 22. Herein, we describe the results of hematological, cytogenetic, fluorescence in situ hybridization (FISH), and high-end molecular analysis in a 77-year-old man diagnosed with CML. The combination of conventional cytogenetic analysis along with metaphase FISH and whole chromosomal paint revealed a novel cryptic variant chromosomal rearrangement involving 9q34, 22q11.2, and 5q22, resulting in ins(9;22) and t(5;22). At the molecular level, using PCR, myeloid NGS panels, and whole transcriptome analyses, we showed that this complex rearrangement indeed resulted in the formation of the BCR::ABL1 e13a2 major fusion transcript. No additional somatic mutations or kinase domain mutations were identified, thereby suggesting that the current case is indeed genetically homogeneous. This study provided strong evidence to support the idea that insertion-derived BCR::ABL1 fusions often involve complex chromosomal abnormalities that are overlooked by conventional cytogenetics but can be identified by a combination of conventional, molecular cytogenetics, and high-end NGS studies.

3.
J Pediatr Hematol Oncol ; 46(3): 125-137, 2024 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-38447075

RESUMO

Acute myeloid leukemia (AML) is a genetically heterogeneous clonal disorder characterized by the accumulation of acquired somatic genetic alterations in hematopoietic progenitor cells, which alter the normal mechanisms of self-renewal, proliferation, and differentiation. Due to significant technological advancements in sequencing technologies in the last 2 decades, classification and prognostic scoring of AML has been refined, and multiple guidelines are now available for the same. The authors have tried to summarize, latest guidelines for AML diagnosis, important markers associated, epigenetics markers, various AML fusions and their importance, etc. Review of literature suggests lack of study or comprehensive information about current NGS panels for AML diagnosis, genes and fusions covered, their technical know-how, etc. To solve this issue, the authors have tried to present detailed review about currently in use next-generation sequencing myeloid panels and their offerings.


Assuntos
Leucemia Mieloide Aguda , Humanos , Leucemia Mieloide Aguda/diagnóstico , Leucemia Mieloide Aguda/genética , Prognóstico , Sequenciamento de Nucleotídeos em Larga Escala , Mutação
5.
Exp Mol Pathol ; 105(3): 380-386, 2018 12.
Artigo em Inglês | MEDLINE | ID: mdl-30414980

RESUMO

BACKGROUND: Somatic mutation of the BRAF gene is one to be the most commonly known genetic change in thyroid tumors especially papillary thyroid cancers. The T1799A activating point mutation is detected in >98% of the thyroid tumors, and result in substitution of amino acid valine at position 600 to glutamic acid. METHOD: In this study, we evaluated BRAF mutation in 95 Indian thyroid tumors by pyrosequencing assay. RESULTS: Overall, 36 cases (38%) showed presence of BRAF V600E mutation, while none of the cases showed V600 K mutation. BRAF mutation was found predominantly in female patients in comparison to males (38.4% vs. 36.4%, p = .86). Likewise, smaller sized tumors (≤2.0 cm) showed increased frequency of BRAF mutation as compared to larger sized tumors which were greater than equal to 2 cm (46% vs. 34.4%, p = .64). Furthermore, the frequency of BRAF mutations was significantly higher in conventional PTC tumor type in comparison to non-conventional and other than PTC tumor type (56% vs. 35% vs. 4%, p = .0007). Notably, a significant correlation between presence of BRAF mutation and extra-thyroidal extension was noted. Nevertheless, presence of BRAF mutation was neither associated with capsular/vascular invasion, nor with tumor necrosis. CONCLUSIONS: Pyrosequencing assay was found to be highly sensitive and accurate method for detecting BRAF point mutations. The frequency and distribution pattern of BRAF mutations is similar to global reports. Furthermore, association of BRAF mutation with extra thyroidal extension indicates its aggressive nature and thus can provide insights into the progression of thyroid tumors from less aggressive to poorly differentiated subtype.


Assuntos
Proteínas Proto-Oncogênicas B-raf/genética , Câncer Papilífero da Tireoide/genética , Câncer Papilífero da Tireoide/patologia , Neoplasias da Glândula Tireoide/genética , Neoplasias da Glândula Tireoide/patologia , Adulto , Análise Mutacional de DNA , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Mutação
6.
Environ Toxicol ; 31(12): 1922-1934, 2016 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26450347

RESUMO

Bisphenol A (BPA), an estrogenic and endocrine disrupting agent, is widely used in manufacturing of polycarbonate plastics and epoxy resins. BPA and other endocrine disrupting chemicals (EDCs) act via multiple mechanisms including interference with mitochondrial functions. Mitochondria are the hub of cellular energy pool and hence are the target of many EDCs. We studied perturbation of activities of mitochondrial enzymes by BPA and its possible role in hepatotoxicity in Wistar rats. Rats were exposed to BPA (150 mg/kg, 250 mg/kg, 500 mg/kg per os, for 14 days) and activities of enzymes of mitochondrial electron transport chain (ETC) were measured. Besides, other biochemical parameters such as superoxide generation, protein oxidation, and lipid peroxidation (LPO) were also measured. Our results indicated a significant decrease in the activities of enzymes of mitochondrial ETC complexes, i.e., complex I, II, III, IV, and V along with significant increase in LPO and protein oxidation. Additionally, a significant increase in mitochondrial superoxide generation was also observed. All these findings could be attributed to enhanced oxidative stress, decrease in reduced glutathione level, and decrease in the activity of superoxide dismutase in rat liver mitochondria isolated from BPA-treated rats. BPA treatment also caused a significant increase in serum alanine aminotransferase, aspartate aminotransferase, alkaline phosphatase, and lactate dehydrogenase indicating its potential hepatotoxicity. Furthermore, histopathological findings revealed marked edema formation, hepatocellular degeneration, and necrosis of liver tissue in BPA-exposed rats. In conclusion, this study provides an evidence of impaired mitochondrial bioenergetics and liver toxicity after high-dose BPA exposure in rats. © 2015 Wiley Periodicals, Inc. Environ Toxicol 31: 1922-1934, 2016.


Assuntos
Compostos Benzidrílicos/toxicidade , Doença Hepática Induzida por Substâncias e Drogas/metabolismo , Disruptores Endócrinos/toxicidade , Mitocôndrias Hepáticas/efeitos dos fármacos , Fenóis/toxicidade , Animais , Doença Hepática Induzida por Substâncias e Drogas/patologia , Complexo I de Transporte de Elétrons/metabolismo , Glutationa/metabolismo , Peroxidação de Lipídeos , Fígado/efeitos dos fármacos , Fígado/metabolismo , Fígado/patologia , Masculino , Mitocôndrias Hepáticas/metabolismo , Estresse Oxidativo , Ratos Wistar , Superóxido Dismutase/metabolismo
7.
Sci Rep ; 14(1): 16437, 2024 07 16.
Artigo em Inglês | MEDLINE | ID: mdl-39013991

RESUMO

Inhalable microparticle-based anti TB drug delivery systems are being investigated extensively for Tuberculosis [TB] treatment as they offer efficient and deep lung deposition with several advantages over conventional routes. It can reduce the drug dose, treatment duration and toxic effects and optimize the drug bioavailability. Yeast derived ß-glucan is a ß-[1-3/1-6] linked biocompatible polymer and used as carrier for various biomolecules. Due to presence of glucan chains, particulate glucans act as PAMP and thereby gets internalized via receptor mediated phagocytosis by the macrophages. In this study, ß-glucan microparticles were prepared by adding l-leucine as excipient, and exhibited 70% drug [Rifabutin] loading efficiency. Further, the sizing and SEM data of particles revealed a size of 2-4 µm with spherical dimensions. The FTIR and HPLC data confirmed the ß-glucan composition and drug encapsulations efficiency of the particles. The mass median aerodynamic diameter [MMAD] and geometric standard deviation [GSD] data indicated that these particles are inhalable in nature and have better thermal stability as per DSC thermogram. These particles were found to be non-toxic upto a concentration of 80 µg/ml and were found to be readily phagocytosed by human macrophage cells in-vitro as well as in-vivo by lung alveolar macrophage. This study provides a framework for future design of inhalable ß-glucan particle based host-directed drug delivery system against pulmonary TB.


Assuntos
Sistemas de Liberação de Medicamentos , Rifabutina , beta-Glucanas , Rifabutina/administração & dosagem , Rifabutina/farmacocinética , Rifabutina/química , beta-Glucanas/química , Humanos , Administração por Inalação , Tuberculose Pulmonar/tratamento farmacológico , Tamanho da Partícula , Macrófagos/metabolismo , Macrófagos/efeitos dos fármacos , Portadores de Fármacos/química , Antituberculosos/administração & dosagem , Antituberculosos/farmacocinética , Antituberculosos/química
8.
Sci Rep ; 14(1): 15745, 2024 07 08.
Artigo em Inglês | MEDLINE | ID: mdl-38977756

RESUMO

The efficacy and treatment outcome of a CML patient are heavily dependent on BCR::ABL1 kinase domain (KD) mutation status. Next-generation sequencing technology is a bright alternative to the previously used sanger sequencing method due to its global presence in diagnostic setups, massive parallel sequencing ability, and far better sensitivity. In the present study, we have demonstrated a new protocol for kinase domain mutation analysis using the next-generation sequencing (NGS) method using the ion torrent sequencing platform. This protocol uses RNA as the starting material, followed by nested PCR to amplify the fusion transcript, which is subsequently used as a template for NGS. Initial validation and comparison of this assay with the sanger sequencing (SS) method yielded 95.23% agreement. CML samples (n = 121) with a failure to TKI response were subjected to this newly developed NGS-based assay to detect KD mutations, from which samples were found to have mutations with a sensitivity ranging from 2.32 to 93.41%. A total of 34.71% of samples (n = 42) were found to be positive for one or more KD mutations, whereas 65.29% of samples (n = 81) were found to be negative. Nine samples out of 42 positive samples, i.e., 21.42%, were found to have compound mutations. This is one of the first studies from India, which includes more than 160 samples and is analyzed by the NGS approach for KD mutation analysis.


Assuntos
Proteínas de Fusão bcr-abl , Sequenciamento de Nucleotídeos em Larga Escala , Leucemia Mielogênica Crônica BCR-ABL Positiva , Mutação , Adolescente , Adulto , Idoso , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Adulto Jovem , Estudos de Coortes , Análise Mutacional de DNA/métodos , Proteínas de Fusão bcr-abl/genética , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Índia , Leucemia Mielogênica Crônica BCR-ABL Positiva/genética , Inibidores de Proteínas Quinases/uso terapêutico
9.
Tuberculosis (Edinb) ; 143: 102395, 2023 12.
Artigo em Inglês | MEDLINE | ID: mdl-37722233

RESUMO

The advent of effective drug regimen and BCG vaccine has significantly decreased the rate of morbidity and mortality of TB. However, lengthy treatment and slower recovery rate, as well as reactivation of the disease with the emergence of multi-drug, extensively-drug, and totally-drug resistance strains, pose a serious concern. The complexities associated are due to the highly evolved and complex nature of the bacterium itself. One of the unique features of Mycobacterium tuberculosis [M.tb] is that it has undergone reductive evolution while maintaining and amplified a few gene families. One of the critical gene family involved in the virulence and pathogenesis is the Toxin-Antitoxin system. These families are believed to harbor virulence signature and are strongly associated with various stress adaptations and pathogenesis. The M.tb TA systems are linked with growth regulation machinery during various environmental stresses. The genes of TA systems are differentially expressed in the host during an active infection, oxidative stress, low pH stress, and starvation, which essentially indicate their role beyond growth regulators. Here in this review, we have discussed different roles of TA gene families in various stresses and their prospective role at the host-pathogen interface, which could be exploited to understand the M.tb associated pathomechanisms better and further designing the new strategies against the pathogen.


Assuntos
Mycobacterium tuberculosis , Sistemas Toxina-Antitoxina , Tuberculose , Humanos , Mycobacterium tuberculosis/genética , Sistemas Toxina-Antitoxina/genética , Estresse Fisiológico , Proteínas de Bactérias/genética
10.
SN Bus Econ ; 2(10): 156, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36185825

RESUMO

As per Internet world stats, with 560 million Internet users, India is the second largest online market in the world, ranked only behind China. Out of these 560 million Internet users in India, almost 375 million people use social media. These facts are enough to highlight the deep penetration of Internet and social media in Indian society. This deep penetration of social media among the Indian workers has further more deepened in the era of COVID-19. The employees are working from home, so they are more prone to use mobile and social media platforms for non-work-related purposes. It is a proven fact that social media has not only impacted our personal lives but also professional lives in more than one ways. Despite the previously mentioned staggering figures which show the deep penetration of Internet and social media in our Indian society, sufficient studies/researches have not been conducted to study the impact of social media on our professional lives. Keeping in mind these things, the purpose of this study is to understand the impact of social media on one of the most crucial aspects of our professional lives, i.e., labour productivity which is quite crucial not only for the success of individuals and business organizations but also for the economic growth of any country. This study also tries to highlight the other related aspects of social media usage at workplace like the perception of the employees regarding use of social media at workplace, purpose for which social media is being used by the employees and other such related issues. Primary data have been used in this study; collected through a survey from the professionals/employees who hail from different sectors/industries. The authors have used convenient sampling method to collect data to examine the impact of social media usage on the productivity of the employees in the era of COVID-19. The findings of this study offer practical insights about the various impacts of social media on work life of the employees and how their working lives have changed while working from home in the era of COVID-19. This study also offers suggestions about harnessing the benefits and minimizing the side-effects of social media usage at workplace. Both the employees and the organizations can equally take advantage of this report.

11.
Cancer Genet ; 262-263: 111-117, 2022 04.
Artigo em Inglês | MEDLINE | ID: mdl-35219054

RESUMO

Here, we report a case of Acute promyelocytic leukemia (APL) with three way complex translocation involving chromosomes 4, 15, and 17. Although chromosome 4 is most commonly associated chromosome in three way translocation, present case is the first report with four novel co-existent findings of new break point region on chromosome 4, new cyclic mechanism with simultaneous breaks, presence of a co-existent tetrasomy 8 and FLT3 ITD positivity.; Comprehensive assessment highlight the utility of combining morphology, immunophenotyping, karyotyping, fluorescence in situ hybridization, and molecular studies for better characterization, optimal management of APL with a better understanding of the pathogenic mechanism and prognosis of the disease.


Assuntos
Leucemia Promielocítica Aguda , Cromossomos Humanos Par 15/genética , Cromossomos Humanos Par 17/genética , Humanos , Hibridização in Situ Fluorescente , Leucemia Promielocítica Aguda/complicações , Leucemia Promielocítica Aguda/genética , Prognóstico , Tetrassomia , Translocação Genética/genética , Tirosina Quinase 3 Semelhante a fms/genética
12.
Antibiotics (Basel) ; 11(8)2022 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-36009907

RESUMO

Mycobacterium tuberculosis (M.tb.) enoyl-acyl carrier protein (ACP) reductase (InhA) is validated as a useful target for tuberculosis therapy and is considered an attractive enzyme to drug discovery. This study aimed to identify the novel inhibitor of the InhA enzyme, a potential target of M.tb. involved in the type II fatty acid biosynthesis pathway that controls mycobacterial cell envelope synthesis. We compiled 80 active compounds from Ruta graveolens and citrus plants belonging to the Rutaceae family for pharmacokinetics and molecular docking analyses. The chemical structures of the 80 phytochemicals and the 3D structure of the target protein were retrieved from the PubChem database and RCSB Protein Data Bank, respectively. The evaluation of druglikeness was performed based on Lipinski's Rule of Five, while the computed phytochemical properties and molecular descriptors were used to predict the ADMET of the compounds. Amongst these, 11 pharmacokinetically-screened compounds were further examined by performing molecular docking analysis with an InhA target using AutoDock 4.2. The docking results showed that gravacridonediol, a major glycosylated natural alkaloid from Ruta graveolens, might possess a promising inhibitory potential against InhA, with a binding energy (B.E.) of -10.80 kcal/mole and inhibition constant (Ki) of 600.24 nM. These contrast those of the known inhibitor triclosan, which has a B.E. of -6.69 kcal/mole and Ki of 12.43 µM. The binding efficiency of gravacridonediol was higher than that of the well-known inhibitor triclosan against the InhA target. The present study shows that the identified natural compound gravacridonediol possesses drug-like properties and also holds promise in inhibiting InhA, a key target enzyme of M.tb.

13.
Comput Ind Eng ; 157: 107381, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-33967377

RESUMO

Unfortunately, an abrupt corona-virus disease (COVID-19) outbreak brought a drastic change in human lives. Almost every sector of human-beings and their related activities are severely infected and affected by this COVID-19 pandemic. As days are passing, the impact of the COVID-19 epidemic is going to be more severe. The fundamental needs for personal protective equipment (PPEs) are rising drastically all over the world. In India, many non-pharmaceutical companies or organizations such as automobile companies are engaged in producing the PPEs at a very marginal rate. Thus this paper proposes a modeling and optimization framework for sustainable production and waste management (SPWM) decision-making model for COVID-19 medical equipment under uncertainty. To quantify the uncertainties among parameter values, we have taken advantage of the intuitionistic fuzzy set theory. A robust ranking function is presented to obtain a crisp version of it. Furthermore, a novel interactive intuitionistic fuzzy programming approach is developed to solve the proposed SPWM model. An ample opportunity to generate the desired solution sets are also depicted. The performance analysis based on multiple criteria such as savings from baseline, co-efficient of variations, and desirability degrees is also introduced. Practical managerial implications are also discussed based on the significant findings after applying to the real case study data-set. Finally, conclusive remarks and the future research direction are also addressed on behalf of the current contributing study.

14.
Life Sci ; 266: 118851, 2021 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-33310032

RESUMO

AIMS: Macrophage is known to readily engulf any particulate material they encounter, including invading microbes and nano- or micro-particles. While recent studies show that some microparticles (MP) are immunogenic even without drug-cargo, the mechanism underlying this phenomenon is yet unclear. Phagocytosis induces NADPH oxidase-2 (NOX-2) mediated ROS generation that is reported to regulate antibacterial autophagy. We therefore, investigated the role of NOX-2 derived ROS in phagosomal maturation and autophagy induction in response to phagocytic uptake of two kinds of polymeric biodegradable and biocompatible microparticles: yeast-derived ß-glucan particles (YDGP) and poly-(D, L-Lactic Acid) microparticles (PMP). MAIN METHODS: J774A.1 macrophage wereas exposed to polymeric particles and the immune responses: ROS, phagosomal maturation and autophagy induction, were examined by assays including NBT, DCFH-DA, NADPH-Oxidase activity, Lysotracker and Acridine Orange. Further, the LC3 and NOX-2 expression were validated by RT-PCR, immunofluorescence assay and Western blotting. Antimicrobial activity of both MP was examined by CFU counting after administration to Mycobacterium tuberculosis and Salmonella typhimurium infected macrophage. KEY FINDINGS: YDGP induces phagosomal maturation and acidic vesicle accumulation at 30 min and 24 h post-exposure, much more proficiently than that by PMP. YDGP exposure also induced NOX-2 dependent expression of light chain 3 (LC3-II), further confirmed as autophagy activation via autophagic flux assay with autophagolysosome inhibitor bafilomycin A1. Additionally, YDGP displayed superior anti-microbial activity than that by PMP. SIGNIFICANCE: The induction of NOX-2-dependent autophagy and antimicrobial activity exhibited by particulate glucans has significant implications in harnessing these drug delivery vehicles as potential 'value-added' autophagy-mediated therapeutics in future.


Assuntos
Autofagia , Macrófagos/patologia , Mycobacterium tuberculosis/efeitos dos fármacos , NADPH Oxidase 2/metabolismo , Fagocitose , beta-Glucanas/farmacologia , Animais , Células Cultivadas , Lisossomos/metabolismo , Macrófagos/efeitos dos fármacos , Macrófagos/metabolismo , Camundongos , NADPH Oxidase 2/genética , Oxirredução , Espécies Reativas de Oxigênio/metabolismo
15.
Cancer Invest ; 28(1): 63-73, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19995225

RESUMO

Mutation of the FMS-like tyrosine kinase 3 (FLT3) gene in Indian population remains unclear till date. Here, we found FLT3-ITD mutations in 19.1%, FLT3-Asp835 mutations in 4.7%, and dual mutations in 4.2%, accounting for overall mutation in 28% of acute myeloid leukemia (AML) patients. FLT3 mutation was more prevalent in APL than non-APL patients (32.2% vs 26.3%), adults tend to show higher incidence than children (30.6% vs 18.2%, p = .1), and were significantly associated with normal karyotype, high WBCs, with no specific distribution in FAB subtypes. Notably, FLT3 mutation was present in 50% of patients with NPM1-Mt, when compared to only 22.6% of patients with NPM1-wt (p < .001). Sequence analyses of internal tandem duplications (ITDs) revealed that duplications were mostly restricted to JM domain (3 to 165 nucleotides). Interestingly, 92.3% cases showed duplication of at least one amino acid (AA) within the stretch Y589 to K602 that includes the two SH2-binding motifs. Analysis of frequency of single AA in the duplicated region revealed that E598 was the most frequently duplicated single AA in 72%, followed by R595 (69.2%), and Y599 (66.7%). Finally, three types of point mutations were identified, including D835Y, D835H, and D835A.


Assuntos
Regulação Enzimológica da Expressão Gênica , Regulação Leucêmica da Expressão Gênica , Leucemia Mieloide Aguda/genética , Mutação Puntual , Sequências de Repetição em Tandem , Tirosina Quinase 3 Semelhante a fms/genética , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Sequência de Aminoácidos , Criança , Pré-Escolar , Análise Mutacional de DNA , Feminino , Frequência do Gene , Humanos , Hibridização in Situ Fluorescente , Índia/epidemiologia , Lactente , Cariotipagem , Leucemia Mieloide Aguda/enzimologia , Leucemia Mieloide Aguda/etnologia , Masculino , Pessoa de Meia-Idade , Dados de Sequência Molecular , Proteínas Nucleares/genética , Nucleofosmina , Adulto Jovem
16.
Cancer Genet ; 241: 42-50, 2020 02.
Artigo em Inglês | MEDLINE | ID: mdl-31653608

RESUMO

Testicular germ cell tumor (TGCT) development may involve a series of modification at epigenetic and genetic level which may act synergistically and transform the primordial gonocyte. This study evaluated the frequency and distribution pattern of RASSF1A/MGMT gene methylation and KRAS, BRAF and cKIT gene mutation in Indian TGCT patient, and their correlation with clinicopathological features. Forty-one TGCT tumors were used to investigate hypermethylation of RASSF1A and MGMT gene and mutations of KRAS codon 12/13, BRAF V600E and cKIT exon 17 mutations. RASSF1A and MGMT methylation was noted in 58.5% and 10% of the TGCTs. A higher frequency of RASSF1A methylation was noted in seminomas (71%, 17/24), while MGMT methylation was frequent in mixed tumors (23%, 3/13). Interestingly, 3 of 41 cases showed concurrent methylation of both the genes. The absence of tumor necrosis was significantly associated with increased frequency of MGMT hypermethylation (30% vs. 3%, p = 0.03). KRAS mutation was identified in 17% (7/41), while none showed BRAF and cKIT mutation. KRAS mutations were predominantly found in codon 12 with G12V as the most recurrent mutations. Mixed germ tumors tends to show increased frequency of KRAS mutation (31%, 4/13), followed by pure seminomas (4%, 1/24). Interestingly, KRAS mutation rate was significantly higher in metastatic tumors in comparison to primary tumors (100% vs. 13%, p = 0.02). No other association of RASSF1A/MGMT/KRAS alterations with other clinicopathological features was noted. In conclusion, these data support the notion that the cancer-associated alterations in the RASSF1, MGMT and KRAS gene may significantly contribute to TGCT pathogenesis.


Assuntos
Metilases de Modificação do DNA/genética , Enzimas Reparadoras do DNA/genética , Regulação Neoplásica da Expressão Gênica , Neoplasias Embrionárias de Células Germinativas/genética , Proteínas Proto-Oncogênicas p21(ras)/genética , Seminoma/genética , Neoplasias Testiculares/genética , Proteínas Supressoras de Tumor/genética , Adolescente , Adulto , Ilhas de CpG/genética , Metilação de DNA , Análise Mutacional de DNA , Epigênese Genética , Heterogeneidade Genética , Sequenciamento de Nucleotídeos em Larga Escala , Humanos , Índia , Masculino , Pessoa de Meia-Idade , Mutação , Taxa de Mutação , Regiões Promotoras Genéticas/genética , Proteínas Proto-Oncogênicas B-raf/genética , Proteínas Proto-Oncogênicas c-kit/genética , Seminoma/patologia , Testículo/patologia , Adulto Jovem
17.
Hematol Oncol ; 27(2): 90-7, 2009 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-19365794

RESUMO

Mutations in the nucleophosmin (NPM1) gene have been recently described to occur in about one-third of acute myeloid leukaemias (AMLs) and represent the most frequent genetic alteration currently known in this subset, specially in those with normal karyotype. This study explored the prevalence and clinical profile of NPM1 mutations in a cohort of 200 Indian adult and children with AML. NPM1 mutations were observed in 19.5% of all population and 34.2% of those with normal karyotype. Adults had a significantly higher incidence of NPM1 mutations than children [38 of 161 (23.6%) vs. 1 of 39 (2.5%), p = 0.002]. NPM1 mutations were significantly associated with normal karyotype (p = 0.001), high WBC count (p = 0.034), AML-M4 subtype (p = 0.039) and a gradient increase of mutation rate with the increase in age groups. Sequence analysis of 39 mutated cases revealed typical mutations (types A, B, D, Nm and H*) as well as two novel variations (types F1 and F2). Majority of the patients had mutation type A (69.2%), followed by B (5.1%), D (15.3%), H* (2.5%) and Nm (2.5%) all involving COOH terminal of the NPM1 protein. In conclusion, this study represents the first report of NPM1 mutation from Indian population and confirms that the incidence of NPM1 mutations varies considerably globally, with slightly lower incidence in Indian population compared to western countries. The current study also served to identify two novel NPM1 mutants that add new insights into the heterogeneity of genomic insertions at exon 12. More ongoing larger studies are warranted to elucidate the molecular pathogenesis of AML that arises in this part of the world. Furthermore, we believe that in light of its high prevalence worldwide, inclusion of NPM1 mutation detection assay in diagnostic evaluations of AML may improve the efficacy of routine genetic characterization and allow assignment of patients to better-defined risk categories.


Assuntos
Leucemia Mieloide/genética , Proteínas Nucleares/genética , Doença Aguda , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Criança , Pré-Escolar , Análise Mutacional de DNA , DNA de Neoplasias/genética , Éxons/genética , Feminino , Frequência do Gene , Saúde Global , Humanos , Hibridização in Situ Fluorescente , Índia/epidemiologia , Lactente , Cariotipagem , Leucemia Mieloide/diagnóstico , Leucemia Mieloide/epidemiologia , Masculino , Pessoa de Meia-Idade , Mutagênese Insercional , Nucleofosmina , Adulto Jovem
18.
Toxicology ; 256(1-2): 7-12, 2009 Feb 04.
Artigo em Inglês | MEDLINE | ID: mdl-19041362

RESUMO

Bisphenol A (BPA), an estrogenic environmental contaminant is also known for oxidative stress-inducing effect. Malnutrition is recognized as a confounding factor in oxidative stress. However, little is known about effect of malnutrition on oxidative stress induced by BPA or other endocrine disrupting chemicals (EDCs). We studied effect of malnutrition (iron deficiency) in rats chronically exposed to low levels of BPA taking into consideration the oxidative stress and antioxidant status in liver, kidney and gonads. Iron deficiency significantly elevated level of lipid peroxidation in BPA-exposed rats. Similarly, decrease in reduced glutathione level was more significant in rats maintained on iron deficient diet compared to those maintained on normal diet. Iron deficiency also significantly modulated activities of vital antioxidant enzymes in all the tissues. Female rats showed more vulnerability than males to iron-deficiency modulated effects of BPA on the above parameters. This study demonstrated that malnutrition, especially iron deficiency, might act as a confounding factor in EDC-induced oxidative stress. However, more studies may be needed to confirm effect of nutritional factors on estrogenic activity of BPA or other EDCs.


Assuntos
Poluentes Ocupacionais do Ar/toxicidade , Anemia Ferropriva/sangue , Disruptores Endócrinos/toxicidade , Estrogênios/toxicidade , Estresse Oxidativo/efeitos dos fármacos , Fenóis/toxicidade , Anemia Ferropriva/fisiopatologia , Animais , Antioxidantes/metabolismo , Compostos Benzidrílicos , Peso Corporal/efeitos dos fármacos , Feminino , Glutationa/metabolismo , Hemoglobinas/metabolismo , Peroxidação de Lipídeos/efeitos dos fármacos , Masculino , Ratos , Ratos Wistar , Caracteres Sexuais
19.
Environ Toxicol ; 24(5): 429-36, 2009 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-18937308

RESUMO

Deltamethrin, an alpha-cyano class of pyrethroid insecticide is used in insect pest control and antimalaria programs in several countries including India. Although various toxic manifestations of deltamethrin are reported in mammals, its ecotoxicologic dimensions are not adequately researched in ecologically and commercially important fishes. In this study, we report genotoxic effect of deltamethrin in a biomarker fish Channa punctata (Bloch). Adult fish were exposed to three concentrations of technical grade deltamethrin (0.4, 0.8, and 1.2 microg/L) for 48 and 72 h. Ethyl methane sulfonate was used as a positive control. Fish were analyzed for induction of micronucleus (MN), nuclear abnormalities (NAs), and oxidative stress biomarkers in erythrocytes. Deltamethrin significantly induced MN and NAs accompanied by increased lipid peroxidation. Activity of antioxidant enzyme superoxide dismutase was significantly decreased but an increase was observed in reduced glutathione level after 72 h of exposure. The NAs in exposed fish included blebbed, lobed and notched nuclei, and binucleated erythrocytes. Our findings suggest that oxidative stress may, in part, be contributing to deltamethrin-induced genotoxic damage to erythrocytes. Although MN induction is a nonspecific biomarker, it may provide an indication of pollution load of deltamethrin in the affected fish population when used as part of suite of other biomarkers.


Assuntos
Eritrócitos/efeitos dos fármacos , Inseticidas/toxicidade , Mutagênicos/toxicidade , Nitrilas/toxicidade , Estresse Oxidativo , Perciformes/sangue , Piretrinas/toxicidade , Animais , Biomarcadores/sangue , Núcleo Celular/efeitos dos fármacos , Núcleo Celular/ultraestrutura , Dano ao DNA , Eritrócitos/metabolismo , Eritrócitos/ultraestrutura , Água Doce/química , Glutationa/metabolismo , Peroxidação de Lipídeos/efeitos dos fármacos , Superóxido Dismutase/metabolismo , Poluentes Químicos da Água/toxicidade
20.
Cancer Genet ; 231-232: 46-53, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30803557

RESUMO

Mutations in the BRAF gene have been described to occur in two-third of melanomas. The objective of the study was to establish the frequency of BRAF V600E/K/R mutation in a series of melanomas from Indian origin and to correlate mutation status with clinicopathological features. Seventy melanoma cases were evaluated for BRAF V600 mutation by pyrosequencing. Overall, BRAF mutations were detected in 30% of the patients. All mutations observed were missense type (GTG > GAG) resulting in p.V600E, while none showed V600K/R mutation. The frequency of BRAF V600E mutations were more in patients with onset age of 50 years. BRAF mutations were significantly associated with tumor site wherein more mutations were seen in tumors from head and neck and extremities region. Acral and mucosal tumor subtype showed a mutation frequency of 31% and 20%, respectively. Epithelial cell morphology tends to harbor frequent BRAF V600E mutation (36%) than other morphological subtypes. Tumors with ulceration and necrosis showed increased BRAF mutation rate (32.5% and 33%) respectively. In conclusion, this is the first study to report a mutation frequency of 30% in this cohort. Our results demonstrated that the BRAF V600E mutation is a frequent event in Indian melanomas, and represents an important molecular target for novel therapeutic approaches.


Assuntos
Estudos de Associação Genética , Melanoma/genética , Melanoma/patologia , Mutação/genética , Proteínas Proto-Oncogênicas B-raf/genética , Neoplasias Cutâneas/genética , Neoplasias Cutâneas/patologia , Adulto , Idoso , Idoso de 80 Anos ou mais , Feminino , Heterozigoto , Humanos , Índia , Masculino , Pessoa de Meia-Idade , Melanoma Maligno Cutâneo
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