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1.
Acta Paediatr ; 108(1): 76-82, 2019 01.
Artigo em Inglês | MEDLINE | ID: mdl-30238492

RESUMO

AIM: Klebsiella spp. have been stated to be the most frequent cause of neonatal intensive care unit (NICU) outbreaks. We report an outbreak of Klebsiella oxytoca in a NICU at a tertiary care hospital in Norway between April 2016 and April 2017. This study describes the outbreak, infection control measures undertaken and the molecular methods developed. METHODS: The outbreak prompted detailed epidemiological and microbial investigations, where whole-genome sequencing (WGS) was particularly useful for both genotyping and development of two new K. oxytoca-specific real-time PCR assays. Routine screening of patients, as well as sampling from numerous environmental sites, was performed during the outbreak. A bundle of infection control measures was instigated to control the outbreak, among them strict cohort isolation. RESULTS: Five neonates had symptomatic infection, and 17 were found to be asymptomatically colonised. Infections varied in severity from conjunctivitis to a fatal case of pneumonia. A source of the outbreak could not be determined. CONCLUSION: This report describes K. oxytoca as a significant pathogen in a NICU outbreak setting and highlights the importance of developing appropriate microbiological screening methods and implementing strict infection control measures to control the outbreak in a setting where the source could not be identified.


Assuntos
Infecção Hospitalar/epidemiologia , Surtos de Doenças/estatística & dados numéricos , Unidades de Terapia Intensiva Neonatal , Infecções por Klebsiella/epidemiologia , Klebsiella oxytoca/patogenicidade , Estudos de Coortes , DNA Bacteriano/análise , Feminino , Mortalidade Hospitalar , Hospitais Universitários , Humanos , Recém-Nascido , Controle de Infecções/organização & administração , Infecções por Klebsiella/diagnóstico , Infecções por Klebsiella/tratamento farmacológico , Masculino , Noruega , Prevalência , Reação em Cadeia da Polimerase em Tempo Real/métodos , Estudos Retrospectivos , Medição de Risco
2.
J Gastroenterol Hepatol ; 32(1): 128-135, 2017 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-27640344

RESUMO

BACKGROUND AND AIM: Accurate, noninvasive biomarkers are needed to diagnose and monitor inflammatory bowel disease (IBD). Neutrophil gelatinase-associated lipocalin (NGAL), also known as lipocalin 2, is expressed in inflamed colonic epithelium and neutrophilic granulocytes. This study explores its properties as a biomarker in feces and plasma and, for the first time, compares fecal NGAL systematically with the existing fecal biomarker calprotectin. METHODS: Neutrophil gelatinase-associated lipocalin was measured in feces from 73 patients with IBD, 21 patients with infectious enterocolitis, 21 patients with irritable bowel syndrome, and 23 healthy subjects using ELISA. The results were correlated to calprotectin, clinical score, endoscopic score, and high-sensitive C-reactive protein. Plasma from 119 patients with IBD and 28 healthy controls was analyzed for NGAL. RESULTS: Fecal NGAL levels (median and interquartile range) were significantly elevated in active ulcerative colitis (UC) 6.05 (3.6-15.1) mg/kg and Crohn's disease (CD) 4.9 (1.5-7.7) mg/kg, compared with patients with inactive UC 1.3 (0.4-2.6) mg/kg, inactive CD 1.5 (0.5-1.7) mg/kg, irritable bowel syndrome 0.4 (0.2-0.6) mg/kg, and healthy controls (HC) 0.3 (0.1-0.4) mg/kg. Patients with infectious enterocolitis had significantly higher fecal-NGAL levels, 2.7 (1.4-5.6) mg/kg than HC. Sensitivity and specificity was 94.7% and 95.7%, respectively, for distinguishing between active IBD and HC. Stability of NGAL in stool was excellent for 7 days in room temperature. Plasma NGAL was significantly elevated in UC and CD compared with HC. CONCLUSIONS: Fecal NGAL is a promising biomarker for IBD. As existing biomarkers are expressed mainly in granulocytes, NGAL's epithelial localization may give supplementary diagnostic information.


Assuntos
Fezes/química , Doenças Inflamatórias Intestinais/diagnóstico , Lipocalina-2/análise , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Biomarcadores/análise , Biomarcadores/sangue , Feminino , Humanos , Complexo Antígeno L1 Leucocitário/análise , Complexo Antígeno L1 Leucocitário/sangue , Lipocalina-2/sangue , Masculino , Pessoa de Meia-Idade , Adulto Jovem
3.
Antimicrob Agents Chemother ; 60(7): 4119-27, 2016 07.
Artigo em Inglês | MEDLINE | ID: mdl-27139479

RESUMO

We report an outbreak of vancomycin-variable vanA(+) enterococci (VVE) able to escape phenotypic detection by current guidelines and demonstrate the molecular mechanisms for in vivo switching into vancomycin resistance and horizontal spread of the vanA cluster. Forty-eight vanA(+) Enterococcus faecium isolates and one Enterococcus faecalis isolate were analyzed for clonality with pulsed-field gel electrophoresis (PFGE), and their vanA gene cluster compositions were assessed by PCR and whole-genome sequencing of six isolates. The susceptible VVE strains were cultivated in brain heart infusion broth containing vancomycin at 8 µg/ml for in vitro development of resistant VVE. The transcription profiles of susceptible VVE and their resistant revertants were assessed using quantitative reverse transcription-PCR. Plasmid content was analyzed with S1 nuclease PFGE and hybridizations. Conjugative transfer of vanA was assessed by filter mating. The only genetic difference between the vanA clusters of susceptible and resistant VVE was an ISL3-family element upstream of vanHAX, which silenced vanHAX gene transcription in susceptible VVE. Furthermore, the VVE had an insertion of IS1542 between orf2 and vanR that attenuated the expression of vanHAX Growth of susceptible VVE occurred after 24 to 72 h of exposure to vancomycin due to excision of the ISL3-family element. The vanA gene cluster was located on a transferable broad-host-range plasmid also detected in outbreak isolates with different pulsotypes, including one E. faecalis isolate. Horizontally transferable silenced vanA able to escape detection and revert into resistance during vancomycin therapy represents a new challenge in the clinic. Genotypic testing of invasive vancomycin-susceptible enterococci by vanA-PCR is advised.


Assuntos
Enterococcus/genética , Família Multigênica/genética , Plasmídeos/genética , Vancomicina/farmacologia , Proteínas de Bactérias/genética , Eletroforese em Gel de Campo Pulsado , Enterococcus/efeitos dos fármacos , Genótipo , Reação em Cadeia da Polimerase Via Transcriptase Reversa
4.
BMC Microbiol ; 15: 258, 2015 Nov 06.
Artigo em Inglês | MEDLINE | ID: mdl-26546000

RESUMO

BACKGROUND: Bloodstream infections represent serious conditions carrying a high mortality and morbidity rate. Rapid identification of microorganisms and prompt institution of adequate antimicrobial therapy is of utmost importance for a successful outcome. Aiming at the development of a rapid, simplified and efficient protocol, we developed and compared two in-house preparatory methods for the direct identification of bacteria from positive blood culture flasks (BD BACTEC FX system) by using matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI TOF MS). Both methods employed saponin and distilled water for erythrocyte lysis. In method A the cellular pellet was overlaid with formic acid on the MALDI TOF target plate for protein extraction, whereas in method B the pellet was exposed to formic acid followed by acetonitrile prior to placing on the target plate. RESULTS: Best results were obtained by method A. Direct identification was achieved for 81.9 % and 65.8 % (50.3 % and 26.2 % with scores >2.0) of organisms by method A and method B, respectively. Overall concordance with final identification was 100 % to genus and 97.9 % to species level. By applying a lower cut-off score value, the levels of identification obtained by method A and method B increased to 89.3 % and 77.8 % of organisms (81.9 % and 65.8 % identified with scores >1.7), respectively. Using the lowered score criteria, concordance with final results was obtained for 99.3 % of genus and 96.6 % of species identifications. CONCLUSION: The reliability of results, rapid performance (approximately 25 min) and applicability of in-house method A have contributed to implementation of this robust and cost-effective method in our laboratory.


Assuntos
Bacteriemia/microbiologia , Bactérias/isolamento & purificação , Técnicas de Tipagem Bacteriana/métodos , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Bactérias/classificação , Bactérias/crescimento & desenvolvimento , Humanos , Reprodutibilidade dos Testes , Saponinas/metabolismo , Sensibilidade e Especificidade
5.
Helicobacter ; 18(6): 397-405, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23865485

RESUMO

OBJECTIVE: Long-term Helicobacter pylori infection causes gastritis leading to hypergastrinemia and predisposes to gastric cancer. Our aim was to assess the role of gastrin in oxyntic mucosal inflammation in H. pylori-infected Mongolian gerbils by means of the gastrin receptor antagonist netazepide (YF476). DESIGN: We studied 60 gerbils for 18 months and left five animals uninfected (control group), inoculated 55 with H. pylori, and treated 28 of the infected animals with netazepide (Hp+YF476 group). Twenty-seven infected animals were given no treatment (Hp group). We measured plasma gastrin and intraluminal pH. H. pylori detection and histologic evaluations of the stomach were carried out. RESULTS: All 55 inoculated animals were H. pylori positive at termination. Eighteen animals in the Hp group had gastritis. There was a threefold increase in mucosal thickness in the Hp group compared to the Hp+YF476 group, and a threefold increase in oxyntic neuroendocrine cells in the Hp group compared to the Hp+YF476 group (p < .05). All animals in the Hp+YF476 group had macro- and microscopically normal findings in the stomach. Plasma gastrin was higher in the Hp group than in the control group (172 ± 16 pmol/L vs 124 ± 5 pmol/L, p < .05) and highest in the Hp+YF476 group (530 ± 36 pmol/L). Intraluminal pH was higher in the Hp group than in the Hp+YF476 group (2.51 vs 2.30, p < .05). CONCLUSION: The gastrin antagonist netazepide prevents H. pylori-induced gastritis in Mongolian gerbils. Thus, gastrin has a key role in the inflammatory reaction of the gastric mucosa to H. pylori infection in this species.


Assuntos
Benzodiazepinonas/administração & dosagem , Mucosa Gástrica/imunologia , Infecções por Helicobacter/prevenção & controle , Helicobacter pylori/fisiologia , Compostos de Fenilureia/administração & dosagem , Receptor de Colecistocinina B/antagonistas & inibidores , Animais , Modelos Animais de Doenças , Mucosa Gástrica/efeitos dos fármacos , Mucosa Gástrica/microbiologia , Gerbillinae , Infecções por Helicobacter/tratamento farmacológico , Infecções por Helicobacter/imunologia , Infecções por Helicobacter/microbiologia , Helicobacter pylori/efeitos dos fármacos , Humanos , Masculino , Receptor de Colecistocinina B/imunologia
6.
J Med Case Rep ; 16(1): 44, 2022 Jan 22.
Artigo em Inglês | MEDLINE | ID: mdl-35063022

RESUMO

BACKGROUND: Inflammatory aneurysms and mycotic aneurysms make up a minority of abdominal aortic aneurysms. Mainly autoimmune mechanisms are proposed in the pathogenesis of inflammatory aneurysms, and it is not routine to check for infectious agents as disease culprits. CASE PRESENTATION: A 58-year-old European male with complaints of abdominal and back pain for 8 weeks was admitted after a semi-urgent computed tomography scan revealed an 85 mm inflammatory abdominal aortic aneurysm. The patient had normal vital signs, slightly elevated inflammatory markers, and mild anemia on admission. Clinical examination revealed a tender pulsating mass in his abdomen. His clinical condition was interpreted as impending rupture and urgent repair of the aneurysm was deemed necessary. Due to the patient's relatively young age and aneurysm neck morphology, open aortic repair was preferred. Preoperatively, the aneurysm appeared inflamed, with fibrous wall thickening and perianeurysmal adhesions. Aneurysm wall biopsies were sent to histopathological and microbiological diagnostics. Routine cultures were negative, but 16S rRNA gene real-time polymerase chain reaction was positive and Borrelia afzelii was identified by DNA sequencing of the polymerase chain reaction product. B. afzelii was also identified by sequencing the polymerase chain reaction product of a Borrelia-specific groEL target. Immunoglobulin G and M anti-Borrelia antibodies were present on serological analysis. Histopathological analysis displayed loss of normal aortic wall structure and diffuse infiltration of lymphocytes and plasma cells. The patient had an uneventful recovery and was discharged after 1 week to a regional rehabilitation facility. Though the patient fares clinically well and inflammatory markers had normalized, antimicrobial treatment with doxycycline continues at 3 months follow-up due to remaining radiologic signs of inflammation. CONCLUSIONS: Borrelia infection in the setting of acute aortic pathology is a rare entity. To our knowledge, this is the first case report to demonstrate a mycotic abdominal aortic aneurysm as a rare manifestation of Lyme disease. Aortic wall biopsies and real-time polymerase chain reaction analysis of the specimen were essential for accurate diagnosis. This finding may contribute to the understanding of the etiology of inflammatory aneurysmal disease and abdominal aneurysms in general.


Assuntos
Aneurisma Infectado , Aneurisma da Aorta Abdominal , Grupo Borrelia Burgdorferi , Aneurisma Infectado/complicações , Aneurisma Infectado/diagnóstico por imagem , Aneurisma da Aorta Abdominal/complicações , Aneurisma da Aorta Abdominal/diagnóstico por imagem , Humanos , Masculino , Pessoa de Meia-Idade , RNA Ribossômico 16S , Tomografia Computadorizada por Raios X
7.
Front Microbiol ; 12: 631557, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33815313

RESUMO

Antimicrobial resistance is an increasing threat to global health and challenges the way we treat infections. Peptides containing the PCNA interacting motif APIM (APIM-peptides) were recently shown to bind to the bacterial PCNA homolog, the beta (ß)-clamp, and to have both antibacterial and anti-mutagenic activities. In this study we explore the antibacterial effects of these peptides on Staphylococcus epidermidis, a bacterial species commonly found in prosthetic joint infections (PJI). Drug-resistant bacterial isolates from PJIs often lead to difficult-to-treat chronic infections. We show that APIM-peptides have a rapid bactericidal effect which when used at sublethal levels also increase the efficacy of gentamicin. In addition, APIM-peptides reduce development and eliminate already existing S. epidermidis biofilm. To study the potential use of APIM-peptides to prevent PJI, we used an in vivo bone graft model in rats where APIM-peptide, gentamicin, or a combination of the two was added to cement. The bone grafts containing cement with the combination was more effective than cement containing only gentamicin, which is the current standard of care. In summary, these results suggest that APIM-peptides can be a promising new drug candidate for anti-infective implant materials to use in the fight against resistant bacteria and chronic PJI.

8.
J Clin Microbiol ; 48(7): 2502-8, 2010 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-20504982

RESUMO

Several methods have been used for typing of Streptococcus agalactiae (group B streptococci [GBS]). Methods currently in use may provide inadequate resolution (e.g., typing of capsular polysaccharides and surface protein) or are labor-intensive and expensive (e.g., multilocus sequence typing [MLST] or pulsed-field gel electrophoresis). This work describes the construction and use of a multiple-locus variant-repeat assay (MLVA) on 126 well-characterized human GBS strains, consisting mostly of invasive Norwegian strains and international reference strains. Based on in silico whole-genomic analysis of the genomes of strains A909, NEM316, and 2603V/R, 18 candidate loci were selected and investigated by PCR. Eleven loci showed diversity, and the five most diverse loci were used for the construction of an MLVA, consisting of a multiplex PCR followed by fragment analysis with capillary electrophoresis. The assay generated clusters which corresponded well with those observed by other methods. However, it provided a considerably higher degree of diversity, with 70 different MLVA types compared to 36 types generated by MLST. Simpson's index of diversity for the 5-locus MLVA was 0.963, compared to 0.899 for the MLST in this strain collection. MLVA results will generally be available within 2 days, which is usually faster than MLST. In our hands, MLVA of GBS represents a rapid, easy, and comparably inexpensive method for high-resolution genotyping of GBS.


Assuntos
Técnicas Bacteriológicas/métodos , Técnicas de Diagnóstico Molecular/métodos , Análise de Sequência de DNA/métodos , Streptococcus agalactiae/genética , Sequências de Repetição em Tandem/genética , Análise por Conglomerados , Genes Bacterianos , Loci Gênicos , Humanos , Reação em Cadeia da Polimerase , Sorotipagem , Infecções Estreptocócicas/microbiologia
9.
J Orthop Surg Res ; 15(1): 23, 2020 Jan 21.
Artigo em Inglês | MEDLINE | ID: mdl-31964416

RESUMO

BACKGROUND: The aim of the study was to establish an experimental chronic musculoskeletal infection model in vivo characterized by (a) a small bacterial inoculum, (b) no general or local signs of infection, (c) several parallels (implants) in each animal and finally (d) a model that is technically easy to perform. METHODS: Bone xenografts with steel plates were implanted intramuscularly in rats. To the xenografts, different inocula of Staphylococcus aureus and two strains of Staphylococcus epidermidis were added. The animals were observed for different time periods before the removal of the xenografts. The xenografts and steel plates were subjected to quantitative bacterial culture after sonication. Additional steel plates were subjected to scanning electron microscopy (SEM) for visualization of biofilm formation. RESULTS: Inoculation of bone grafts with S. aureus did produce a pyogenic infection in all animals. A chronic infection was established in rats where the bone grafts were inoculated with S. epidermidis. A bacterial inoculum of 100 colony-forming units (CFU) of S. epidermidis was adequate as a minimum infective dose. During a period of up until 42 days, the animals infected with S. epidermidis had no general or local signs of infection. According to the results of the quantitative bacterial culture of sonicate fluid and SEM, a biofilm was developed on all implants. CONCLUSION: In the present in vivo model, a very small bacterial inoculum succeeded in establishing a chronic musculoskeletal implant infection where a biofilm was formed on the implants. The experimental model is easy to perform and allows several implants in each animal. The model could be useful for the study of biofilm formation in vivo on different implants and different surfaces.


Assuntos
Modelos Animais de Doenças , Infecções Relacionadas à Prótese , Infecções Estafilocócicas , Animais , Doença Crônica , Ratos , Staphylococcus aureus , Staphylococcus epidermidis
10.
J Orthop Surg Res ; 15(1): 522, 2020 Nov 11.
Artigo em Inglês | MEDLINE | ID: mdl-33176843

RESUMO

BACKGROUND: In cases of prosthetic joint infections, culture of sonication fluid can supplement culture of harvested tissue samples for correct microbial diagnosis. However, discrepant results regarding the increased sensitivity of sonication have been reported in several studies. To what degree bacteria embedded in biofilm are dislodged during the sonication process has to our knowledge not been fully elucidated. In the present in vitro study, we have evaluated the effect of sonication as a method to dislodge biofilm by quantitative microscopy. METHODS: We used a standard biofilm method to cover small steel plates with biofilm forming Staphylococcus epidermidis ATCC 35984 and carried out the sonication procedure according to clinical practice. By comparing area covered with biofilm before and after sonication with epifluorescence microscopy, the effect of sonication on biofilm removal was quantified. Two series of experiments were made, one with 24-h biofilm formation and another with 72-h biofilm formation. Confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM) were used to confirm whether bacteria were present after sonication. In addition, quantitative bacteriology of sonication fluid was performed. RESULTS: Epifluorescence microscopy enabled visualization of biofilm before and after sonication. CLSM and SEM confirmed coccoid cells on the surface after sonication. Biofilm was dislodged in a highly variable manner. CONCLUSION: There is an unexpected high variation seen in the ability of sonication to dislodge biofilm-embedded S. epidermidis in this in vitro model.


Assuntos
Biofilmes/crescimento & desenvolvimento , Microscopia de Fluorescência , Sonicação/métodos , Staphylococcus epidermidis/fisiologia , Técnicas In Vitro , Microscopia Confocal , Microscopia Eletrônica de Varredura , Fatores de Tempo
11.
Acta Orthop ; 80(2): 245-50, 2009 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-19404811

RESUMO

BACKGROUND AND PURPOSE: Low-virulence implant infections are characterized by bacterial colonization of the implant with subsequent biofilm formation. In these cases, soft tissue biopsies often prove to be culture negative. Consequently, detachment of the causative adherent bacteria is crucial for correct microbiological diagnosis. Using an in vitro model, we compared 4 methods of biofilm sampling from metal surfaces. METHODS: Discs of titanium and steel were incubated in the presence of Staphylococcus aureus, Staphylococcus epidermidis, Enterococcus faecalis, and Propionibacterium acnes in Mueller Hinton broth. Non-adherent bacteria were removed by repeated rinsing of the discs. 10 parallels of each disc were subjected to 1 of 4 methods for bacterial recovery: (A) sonication of the discs, (B) scraping of the discs using surgical blades followed by streaking of the blades onto agar plates, (C) scraping of the discs followed by vortex mixing of the surgical blades, and (D) scraping of the discs followed by sonication of the surgical blades. Quantitative bacterial cultures were performed for each sampling method. RESULTS: With the exception of S. epidermidis on steel, sonication efficiently and reliably dislodged biofilm bacteria. The scraping methods employed did not detach bacteria embedded in biofilm. INTERPRETATION: Scraping of metal surfaces is not an adequate method for sampling of biofilm bacteria in vitro.


Assuntos
Técnicas Bacteriológicas , Biofilmes , Próteses e Implantes/microbiologia , Infecções Relacionadas à Prótese/microbiologia , Sonicação , Aderência Bacteriana , Biofilmes/crescimento & desenvolvimento , Contagem de Colônia Microbiana , Enterococcus faecalis/crescimento & desenvolvimento , Contaminação de Equipamentos , Humanos , Viabilidade Microbiana , Propionibacterium acnes/crescimento & desenvolvimento , Aço Inoxidável , Staphylococcus aureus/crescimento & desenvolvimento , Staphylococcus epidermidis/crescimento & desenvolvimento , Titânio
12.
J Clin Microbiol ; 46(7): 2280-90, 2008 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-18463209

RESUMO

Atypical enteropathogenetic Escherichia coli (EPEC) strains are frequently detected in children with diarrhea but are also a common finding in healthy children. The aim of this study was to compare the phylogenetic ancestry and virulence characteristics of atypical (eae positive, stx and bfpA negative) EPEC strains from Norwegian children with (n = 37) or without (n = 19) diarrhea and to search for an association between phylogenetic ancestry and diarrhea. The strains were classified in phylogenetic groups by phylogenetic marker genes and in sequence types (STs) by multilocus sequence typing. Phylogenetic ancestry was compared to virulence characteristics based on DNA microarray analysis. Serotyping and pulsed-field gel electrophoresis (PFGE) were also performed. All four phylogenetic groups, 26 different STs, and 20 different clonal groups were represented among the 56 atypical EPEC strains. The strains were separated into three clusters by overall virulence gene profile; one large cluster with A, B1, and D strains and two clusters with group B2 strains. There was considerable heterogeneity in the PFGE profiles and serotypes, and almost half of the strains were O nontypeable. The efa1/lifA gene, previously shown to be statistically linked with diarrhea in this strain collection (J. E. Afset et al., J. Clin. Microbiol. 44:3703-3711, 2006), was present in 8 of 26 STs. The two phylogenetic groups B1 and D were weakly associated with diarrhea (P = 0.06 and P = 0.09, respectively). In contrast, group B2 was isolated most frequently from healthy controls (P = 0.05). In conclusion, the atypical EPEC strains were heterogeneous both phylogenetically and by virulence profile. Phylogenetic ancestry was less useful as a predictor of diarrhea than were specific virulence genes.


Assuntos
DNA Bacteriano/genética , Diarreia/microbiologia , Escherichia coli Enteropatogênica/classificação , Escherichia coli Enteropatogênica/genética , Infecções por Escherichia coli/microbiologia , Filogenia , Fatores de Virulência/genética , Adesinas Bacterianas/genética , Toxinas Bacterianas/genética , Estudos de Casos e Controles , Pré-Escolar , Análise por Conglomerados , Eletroforese em Gel de Campo Pulsado , Escherichia coli Enteropatogênica/isolamento & purificação , Proteínas de Escherichia coli/genética , Proteínas de Fímbrias/genética , Genótipo , Humanos , Análise em Microsséries , Noruega , Análise de Sequência de DNA , Sorotipagem , Toxinas Shiga/genética
13.
Tidsskr Nor Laegeforen ; 128(12): 1406-9, 2008 Jun 12.
Artigo em Norueguês | MEDLINE | ID: mdl-18552903

RESUMO

BACKGROUND: Whipple's disease is a rare infectious disease. This review describes the clinical picture, diagnostic aspects and treatment options. MATERIAL AND METHODS: Based on a clinical case, a literature study was performed by searching PubMed (unlimited) with the words "whipples disease" combined with " TROPHERYMA WHIPPELII: " (118 hits) and " TROPHERYMA WHIPPLEI:" (65 hits). Titles and abstracts were used to identify other relevant articles. RESULTS AND INTERPRETATION: Whipple's disease may affect several organ systems and thus causes a wide range of symptoms. The most common ones are weight loss, abdominal pain, diarrhoea and arthralgia. The diagnosis is based on PAS-POSITIVE MATERIAL: in duodenal biopsies and identification of gene fragments from the bacterium TROPHERYMA WHIPPLEI:. Presence of the bacterium may be confirmed by sensitive polymerase chain reaction assays. Left without treatment the disease may be lethal. Proper antibiotic treatment is imperative to heal the disease.


Assuntos
Doença de Whipple , Actinobacteria/isolamento & purificação , Antibacterianos/uso terapêutico , Diagnóstico Diferencial , Feminino , Humanos , Intestino Delgado/diagnóstico por imagem , Intestino Delgado/patologia , Pessoa de Meia-Idade , Reação em Cadeia da Polimerase , Ultrassonografia , Doença de Whipple/diagnóstico , Doença de Whipple/tratamento farmacológico , Doença de Whipple/microbiologia
14.
J Med Microbiol ; 67(2): 169-182, 2018 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-29293080

RESUMO

PURPOSE: Staphylococcus epidermidis colonies often display several morphologies and antimicrobial susceptibility patterns when cultured from device-related infections, and may represent one or multiple genotypes. Genotyping may be helpful in the clinical interpretation, but is time consuming and expensive. We wanted to establish a method for rapid discrimination of S. epidermidis genotypes for use in a routine microbiology laboratory. METHODOLOGY: A real-time PCR targeting eight discriminatory class I or II single-nucleotide polymorphisms (SNPs) in six of the seven housekeeping genes was constructed. Post PCR, high-resolution melt (HRM) analysis using EvaGreen as fluorophore discriminated amplicons based on their percentage GC content. RESULTS: In silico, 42 representative sequence types (STs), including all major MLST group and subgroup founders, were separated into 23 different cluster profiles with a Simpson's index of diversity of 0.97. By HRM-PCR, 11 commonly encountered hospital and outbreak STs were separated into eight HRM patterns. CONCLUSION: This method can rapidly establish whether S. epidermidis strains belong to different genotypes. It can be used in patients with S. epidermidis infections, as an aid in outbreak investigations and to select strains for investigation with more discriminatory methods, saving workload and costs. Results may be obtained the same day as culture results. Its strength lies mainly in indicating differences, as some STs may have the same melt profile. Changes in S. epidermidis epidemiology may warrant alterations in the inclusion of SNPs. We believe this method can reduce the threshold for performing genotyping analysis on an increasingly important nosocomial pathogen.


Assuntos
Técnicas de Tipagem Bacteriana/métodos , Polimorfismo de Nucleotídeo Único , Reação em Cadeia da Polimerase em Tempo Real , Infecções Estafilocócicas/microbiologia , Staphylococcus epidermidis/genética , Infecção Hospitalar/diagnóstico , Infecção Hospitalar/microbiologia , DNA Bacteriano , Genes Essenciais , Genótipo , Humanos , Tipagem de Sequências Multilocus , Infecções Estafilocócicas/diagnóstico , Staphylococcus epidermidis/classificação , Staphylococcus epidermidis/isolamento & purificação
15.
J Med Microbiol ; 56(Pt 2): 223-228, 2007 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-17244804

RESUMO

Group B streptococcus (GBS) is an important aetiological agent of serious neonatal infections. A rapid and sensitive method for the detection of GBS colonization in pregnant women at delivery could make intrapartum screening for GBS possible. A real-time PCR method targeting the sip gene of GBS in pregnant women at delivery has been evaluated. The performance of the real-time PCR was compared with optimized GBS culture. Separate vaginal and rectal swabs were collected from women hospitalized at the delivery department at St Olavs Hospital, Trondheim, Norway, from January 15 through May 2005. The specimens were cultured on selective blood agar plates and in selective broth and examined by real-time PCR. Of samples from 251 women, 87 (34.7%) were GBS positive by culture and 86 (34.3%) were positive by PCR. Using GBS culture as the 'gold standard', the sensitivity of real-time PCR was 0.97 (95% confidence interval 0.90-0.99) and specificity was 0.99 (95% confidence interval 0.97-1.00). In two women the PCR was positive and the culture negative. Additional analysis using cylE PCR substantiates that these two women were true GBS carriers with negative GBS culture. The rate of GBS colonization was lower in vaginal specimens than in rectal specimens both by culture and PCR. The real-time PCR assay is fast, highly sensitive and specific for detecting GBS colonization in pregnant women at delivery, and has the potential for intrapartum detection of GBS colonization. Both vaginal and rectal samples are required to achieve highest possible detection rate.


Assuntos
Antígenos de Bactérias/genética , Portador Sadio/microbiologia , Reação em Cadeia da Polimerase/métodos , Complicações Infecciosas na Gravidez/microbiologia , Infecções Estreptocócicas/microbiologia , Streptococcus agalactiae/isolamento & purificação , Proteínas de Bactérias/genética , DNA Bacteriano/genética , Parto Obstétrico , Feminino , Humanos , Noruega , Gravidez , Prevalência , Reto/microbiologia , Sensibilidade e Especificidade , Streptococcus agalactiae/genética , Vagina/microbiologia
16.
Arthroscopy ; 22(5): 489-96, 2006 May.
Artigo em Inglês | MEDLINE | ID: mdl-16651157

RESUMO

PURPOSE: The purpose of the study was to evaluate the biocompatibility of polylactide (PLLA) screws in comparison with standard metal screws for fixation of the patellar tendon graft in human anterior cruciate ligament (ACL) reconstruction. METHODS: A total of 41 patients (22 women and 19 men) were prospectively randomized for the use of metal interference screws (20 patients) or biologically resorbable PLLA screws from Linvatec, Largo, FL (21 patients). Average age at the time of surgery was 26 years (15 to 51 y). Synovial fluid and plasma were collected preoperatively and after 6 weeks in both groups. Plasma was analyzed for C5a and synovial fluid, as well as for terminal SC5b-9 complement complex (TCC) and interleukin (IL)-8. At 1 year after surgery, serum was incubated with metal, PLLA, and no screws; this was followed by analysis of C5a after 1 and 6 hours of incubation. Inflammatory mediators were measured through enzyme-linked immunosorbent assay (ELISA). RESULTS: In the BioScrew group, 4 patient samples showed high C5a concentration in synovial fluid after 6 weeks, but no statistically significant difference was observed between the 2 groups (P = .11). One patient in the BioScrew group had a high TCC value after 6 weeks, but no statistically significant difference was seen between the 2 groups (P = .20). In the in vitro study, no increased C5a generation was observed in sera incubated with a BioScrew or a metal screw compared with controls. CONCLUSIONS: No statistically significant difference was observed between the BioScrew and metal screw groups concerning C5a, TCC, and IL-8 formation. However, some patients in the BioScrew group showed elevated values. LEVEL OF EVIDENCE: Level II, prospective randomized trial.


Assuntos
Implantes Absorvíveis , Ligamento Cruzado Anterior/cirurgia , Parafusos Ósseos , Ativação do Complemento , Metais , Procedimentos de Cirurgia Plástica/instrumentação , Poliésteres , Adolescente , Adulto , Lesões do Ligamento Cruzado Anterior , Proteína C-Reativa/análise , Complemento C5a/análise , Complexo de Ataque à Membrana do Sistema Complemento , Proteínas do Sistema Complemento/análise , Ensaio de Imunoadsorção Enzimática , Feminino , Glicoproteínas/análise , Humanos , Técnicas In Vitro , Interleucina-8/análise , Masculino , Pessoa de Meia-Idade , Ligamento Patelar/cirurgia , Recuperação de Função Fisiológica , Líquido Sinovial/química
17.
Tidsskr Nor Laegeforen ; 126(8): 1055-7, 2006 Apr 06.
Artigo em Norueguês | MEDLINE | ID: mdl-16619065

RESUMO

BACKGROUND: Tularaemia is a bacterial zoonosis caused by the bacterium Francisella tularensis. Different species of rodents and small mammals are the main reservoir; the transmission of disease is caused by direct contact with diseased animals, via insect vectors, or by ingestion of contaminated food and water. The disease is known to cause a complex clinical presentation in which head and neck manifestations are common. It occurs at a low annual rate in the northern and middle regions of Norway, but in recent years there have been several reported cases also in the southern parts of the country. The incidence of tularaemia is much higher in Sweden compared to Norway; the reason remains obscure. MATERIAL AND METHODS: In this paper we report two admitted cases in which fever and a solitary neck mass were the predominant clinical findings. We review the number of cases reported to the Norwegian Institute of Public Health from 1976 to 2002, with particular emphasis on the role of tularaemia in the context of a neck tumour and oropharyngeal symptoms. RESULTS AND INTERPRETATION: The suspicion of tularaemia should be raised in patients with a solitary neck mass of presumed infectious aetiology, in particular when administration of beta-lactam antibiotics has failed. The diagnosis is usually dependent on serological evidence of F. tularensis infection. Recently, PCR techniques have been developed that facilitate rapid detection of F. tularensis in clinical specimens.


Assuntos
Neoplasias de Cabeça e Pescoço/diagnóstico , Tularemia/diagnóstico , Adulto , Animais , Diagnóstico Diferencial , Feminino , Francisella tularensis/isolamento & purificação , Humanos , Tularemia/transmissão , Zoonoses
18.
Basic Clin Pharmacol Toxicol ; 96(2): 94-102, 2005 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-15679471

RESUMO

All vertebrates produce gastric acid. Its main function is inactivation of ingested microorganisms. The majority of microbiological pathogens ingested never reaches the intestine because of the gastric barrier. Although gastric hypochlorhydria is fairly common due to atrophic gastritis, gastric surgery or use of inhibitors of gastric acid secretion, the resulting susceptibility to infection has not been studied extensively. Drug-induced blockade of acid secretion leads to gastrointestinal bacterial overgrowth; the clinical significance of this is still controversial. Gastric acidity is known to protect against non-typhoid salmonellosis and cholera and it is suspected that it protects against several parasitic diseases as giardiasis and strongyloides. There is a lack of studies focusing on the impact of the gastric acidic barrier on viral infections. Concerning prion infections only a single study has been performed, demonstrating a possible role of gastric acidity in the protection against foodborne prion disease in mice. The combination of malnutrition and hypochlorhydria may contribute to the high prevalence of gastrointestinal infections in developing countries. Further studies are needed to evaluate the clinical consequences of impaired gastric acidity with respect to susceptibility to infections.


Assuntos
Doenças Transmissíveis/etiologia , Suco Gástrico/fisiologia , Gastroenteropatias/etiologia , Gastroenteropatias/prevenção & controle , Animais , Suco Gástrico/química , Humanos , Ácido Clorídrico/química , Ácido Clorídrico/farmacologia , Pepsina A/química , Pepsina A/farmacologia , Pepsina A/fisiologia
19.
J Med Microbiol ; 52(Pt 11): 1015-1019, 2003 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-14532347

RESUMO

The aim of the present study was to investigate the relative contribution of enteropathogenic Escherichia coli (EPEC) as a cause of infectious diarrhoea in Norwegian children. Data from faecal specimens from children <2 years old with diarrhoea during the year 2001 were analysed. E. coli isolates with the attaching and effacing genotype (eae+) were examined for the presence of the bundle-forming pilus (bfpA) and Shiga toxin genes by PCR, and for genetic relatedness by PFGE. During the 1-year period, 598 specimens from 440 patients <2 years old were analysed. Potential enteric pathogens were identified in 124 patients (28.2 %). EPEC was the most frequently identified agent (44 patients), followed by rotavirus (41 patients), Campylobacter jejuni (17 patients) and adenovirus (17 patients). All other agents were detected in five patients or less. Only one of the eae+ E. coli isolates was classified as typical EPEC (bfpA+). Among the 43 isolates that were classified as atypical EPEC (bfpA-), eight strains belonged to EPEC serogroups, whereas the majority of strains (n = 35) were not agglutinated by EPEC antisera. None of the EPEC isolates were genetically related. This study demonstrates that atypical EPEC of non-EPEC serogroups is highly prevalent among Norwegian children with diarrhoea.


Assuntos
Diarreia Infantil/microbiologia , Escherichia coli/isolamento & purificação , Escherichia coli/classificação , Feminino , Humanos , Lactente , Masculino , Noruega , Sorotipagem , Fatores de Tempo
20.
J Med Microbiol ; 51(7): 595-662, 2002 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-12132777

RESUMO

Serotyping and genotyping are important tools in epidemiological studies of group B streptococcal (GBS) infections, which are important diseases in man, particularly in newborns. In the present study, 241 GBS isolates from Zimbabwe, comprising 124 carrier isolates from pregnant women and 117 isolates from patients hospitalised for various diseases, were serotyped. Antibodies specific for the capsular polysaccharide antigens (CPAs) Ia, Ib and II-V and antibodies specific for the surface-localised proteins, c(alpha), c(beta), R1, R3 and R4 were used for serotyping. Strains of the CPA types Ia (17%), III (47.7%) and V (23.2%) predominated. Of the various protein antigens, c(alpha) and R4 were expressed with highest frequency, c(alpha) by 100% of the CPA type Ia strains and R4 by 92% of the CPA type III strains. The R3 protein occurred frequently (24%), especially in type V strains (84%). A total of 25 serovariants was detected in the strain collection with the variants Ia/c(alpha) (16%), III/R4 (43.5%) and V/c(alpha), R3 (14.1%) occurring with the highest frequency. Serotype and subtype distribution of the carrier isolates were essentially similar to those of the disease-associated isolates. Genomic heterogeneity was demonstrated by pulsed-field gel electrophoresis of type III/R4 and type V/c(alpha), R3 isolates, but to a much lesser extent than recorded with Norwegian strains. These results demonstrate that many variants of GBS occur in the Zimbabwean population. The data obtained may assist in the formulation of a possible future GBS vaccine for Zimbabwe and perhaps for other African countries.


Assuntos
Portador Sadio/microbiologia , Complicações Infecciosas na Gravidez/microbiologia , Infecções Estreptocócicas/microbiologia , Streptococcus agalactiae/classificação , Adulto , Anticorpos Antibacterianos/imunologia , Antígenos de Bactérias/análise , Portador Sadio/diagnóstico , Portador Sadio/epidemiologia , DNA Bacteriano/análise , Eletroforese em Gel de Campo Pulsado , Feminino , Genótipo , Humanos , Filogenia , Gravidez , Complicações Infecciosas na Gravidez/epidemiologia , Sorotipagem , Infecções Estreptocócicas/diagnóstico , Infecções Estreptocócicas/epidemiologia , Streptococcus agalactiae/genética , Streptococcus agalactiae/imunologia , Zimbábue/epidemiologia
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