From conflict and misunderstanding to respect.

Sociologists of the 19th and the 20th centuries were tackling the relation between science and religion. A few models of these relations were offered, by which the monopoly over the truth by any one of those is crashed. Therefore, there are a few models but each is with lots of limitations. None is sufficient to explain the relation between the science and religion, but each contributes to certain extent to better understanding of those relations. Almost every one of the interpretations was under the influence of the social (particularly ideological and political) conditions in which they were emerging. One of those could be named as "Riding on an old horse: there is no reconciliation between faith and reason". Is the enlightenment theory the source of a conflict between "faith" and "reason"? What is it that leads to the conflict of the science and religion? From rejection to acceptance - a view on Darwin's theory then and now. do creationist theories lead to exacerbation of relations between the science and religion? Postmodernism on the relation of science and religion. Stand views of religious communities - science and religion are not in conflict. Examples that confirm such opinion. Many priests and Islamic teachers have given their contributions to the development of science (technology, medicine, geography, architecture, urbanism, music etc.). Isn't it that the calendars, past (Egyptian, Chinese, Aztec etc.) and present (Hindu, Jewish, Islamic, Gregorian etc.) have come from the umbrella of religions. Are conflicts between science and religion the matter of the past? Disputes over use of drugs in rituals exist even today. Religion and science are autonomous fields - but where is the border between them? Technology and religions. How religions refer to technology. Examples of applications of technical achievements in religious activities. An ecological theory that is being developed within sociology of religion focuses on the relation of religions and religious communities toward nature. Contemporary dilemmas (ethic discussions within the field of biomedicine - euthanasia, abortion, organ donation, aesthetic surgery etc.).

Usability Testing the "Personal Patient Profile-Prostate" in a Sample of African American and Hispanic Men.

Shared treatment decision making in a cancer setting requires a patient's understanding of the potential benefits and risks of each treatment option. Graphical display of risk information is one approach to improving understanding. Little is known about how patients engage with infographics in the context of health education materials and whether interactions vary with health literacy levels. We conducted an observational study, using an eye tracker device, of how men with newly diagnosed localized prostate cancer visually engaged with an on-screen infographic depicting risk information in the Personal Patient Profile-Prostate. Health literacy was measured with the Short Assessment of Health Literacy-English. Gaze patterns on an exemplar screens containing infographics about survival were analyzed and explored with respect to sociodemographic and health literacy data. Acceptability of Personal Patient Profile-Prostate was measured with the Acceptability E-scale. Twenty-six English-speaking men participated, and eye tracking data were collected for 12 men on the exemplar page of risk information that we analyzed. We found preliminary evidence of visual scanning and of participants with lower literacy focusing sooner on infographics versus text. Acceptability for Personal Patient Profile-Prostate was high. These findings suggest that infographics may be of higher relative value to participants with low health literacy. Eye trackers may provide valuable information on how people visually engage with infographics and may inform development of health education materials, although care must be taken to minimize data loss.

Spliceosome database: a tool for tracking components of the spliceosome.

The spliceosome is the extremely complex macromolecular machine responsible for pre-mRNA splicing. It assembles from five U-rich small nuclear RNAs (snRNAs) and over 200 proteins in a highly dynamic fashion. One important challenge to studying the spliceosome is simply keeping track of all these proteins, a situation further complicated by the variety of names and identifiers that exist in the literature for them. To facilitate studies of the spliceosome and its components, we created a database of spliceosome-associated proteins and snRNAs, which is available at http://spliceosomedb.ucsc.edu and can be queried through a simple browser interface. In the database, we cataloged the various names, orthologs and gene identifiers of spliceosome proteins to navigate the complex nomenclature of spliceosome proteins. We also provide links to gene and protein records for the spliceosome components in other databases. To navigate spliceosome assembly dynamics, we created tools to compare the association of spliceosome proteins with complexes that form at specific stages of spliceosome assembly based on a compendium of mass spectrometry experiments that identified proteins in purified splicing complexes. Together, the information in the database provides an easy reference for spliceosome components and will support future modeling of spliceosome structure and dynamics.

Global warming scenarios for the Eastern Adriatic Sea indicate a higher risk of invasiveness of non-native marine organisms relative to current climate conditions.

Globally, marine bioinvasions threaten marine ecosystem structure and function, with the Mediterranean Sea being one of the most affected regions. Such invasions are expected to increase due to climate change. We conducted a risk screening of marine organisms (37 fishes, 38 invertebrates, and 9 plants), both extant and 'horizon' (i.e., not present in the area but likely to enter it). Based on expert knowledge for the Eastern Adriatic Sea coasts of Slovenia, Croatia, and Montenegro, screenings were conducted under both current and predicted climate conditions indicating with an increase in sea surface temperature and salinity of the Adriatic Sea together with changes in precipitation regime. Our aims were to: (1) identify non-native extant and horizon marine species that may pose threats to native biodiversity and (2) evaluate the risk of invasiveness of the selected species under current and predicted climate conditions. Of the 84 species screened, there was an increase in those ranked as 'high risk' from 33 (39.3%) under current climate conditions and to 47 (56.0%) under global warming scenarios. For those ranked as 'very high' risk, the increase was from 6 (7.1%) to 21 (25.0%). Amongst the screened species, the already established high-risk species Pacific oyster Magallana gigas and Atlantic blue crab Callinectes sapidus represent a threat to ecosystem services. Given the under-representation of marine species in the current European Union List, the species we have ranked as high to very high risk should be included. Supplementary Information: The online version contains supplementary material available at 10.1007/s42995-023-00196-9.

The Role of AI in Breast Cancer Lymph Node Classification: A Comprehensive Review.

Breast cancer is a significant health issue affecting women worldwide, and accurately detecting lymph node metastasis is critical in determining treatment and prognosis. While traditional diagnostic methods have limitations and complications, artificial intelligence (AI) techniques such as machine learning (ML) and deep learning (DL) offer promising solutions for improving and supplementing diagnostic procedures. Current research has explored state-of-the-art DL models for breast cancer lymph node classification from radiological images, achieving high performances (AUC: 0.71-0.99). AI models trained on clinicopathological features also show promise in predicting metastasis status (AUC: 0.74-0.77), whereas multimodal (radiomics + clinicopathological features) models combine the best from both approaches and also achieve good results (AUC: 0.82-0.94). Once properly validated, such models could greatly improve cancer care, especially in areas with limited medical resources. This comprehensive review aims to compile knowledge about state-of-the-art AI models used for breast cancer lymph node metastasis detection, discusses proper validation techniques and potential pitfalls and limitations, and presents future directions and best practices to achieve high usability in real-world clinical settings.

Mediterranean fanworm, Sabella spallanzanii (Gmelin, 1791), as a potential biomonitor of trace metal pollution in the marine environment.

Levels of trace metals (Cd, Cr, Cu, Fe, Ni, Pb, Mn, and Zn) were measured in soft tissues and external tubes of the Mediterranean fanworm, Sabella spallanzanii (Gmelin, 1791), to evaluate its suitability as a biomonitor of metal pollution. Study was conducted in the coastal area of the eastern Adriatic Sea. Polychaetes were collected from two locations, a site located in a local marina and an unpolluted control site. Results indicate that S. spallanzanii has the capacity to accumulate metals in soft tissues as well as in tubes. The levels of most metals were considerably higher in tubes compared to soft tissues, indicating long-term accumulation of metals in tubes. High levels of several metals (Cu, Zn, Cr, Pb and Fe), found in soft tissues and tubes sampled at the marina site, reflect the elevated contaminant levels in the marina, associated with the use of antifouling agents, paints, petrol additives, and ship maintenance activities. Metal concentrations in tissues and tubes generally decreased with size, indicating the influence of growth and metabolic rates on trace metal uptake. Trace metal levels found in S. spallanzanii tissues were comparable to the levels found in Mytilus galloprovincialis, a species commonly used in biomonitoring studies, in areas exposed to similar levels of anthropogenic stressors. According to the results of the present study, S. spallanzanii has been identified as a suitable biomonitor of metal pollution due to its sedentary nature, widespread distribution, abundance and the ability to accumulate high levels of metals within its tissues and tubes.

Dynamic of Serum TWEAK Levels in Critically Ill COVID-19 Male Patients.

Although the number of cases and mortality of COVID-19 are seemingly declining, clinicians endeavor to establish indicators and predictors of such responses in order to optimize treatment regimens for future outbreaks of SARS-CoV-2 or similar viruses. Considering the importance of aberrant immune response in severe COVID-19, in the present study, we aimed to explore the dynamic of serum TNF-like weak inducer of apoptosis (TWEAK) levels in critically-ill COVID-19 patients and establish whether these levels may predict in-hospital mortality and if TWEAK is associated with impairment of testosterone levels observed in this population. The present single-center cohort study involved 66 men between the ages of 18 and 65 who were suffering from a severe type of COVID-19. Serum TWEAK was rising during the first week after admission to intensive care unit (ICU), whereas decline to baseline values was observed in the second week post-ICU admission (p = 0.032) but not in patients who died in hospital. Receiver-operator characteristics analysis demonstrated that serum TWEAK at admission to ICU is a significant predictor of in-hospital mortality (AUC = 0.689, p = 0.019). Finally, a negative correlation was found between serum TWEAK at admission and testosterone levels (r = -0.310, p = 0.036). In summary, serum TWEAK predicts in-hospital mortality in severe COVID-19. In addition, inflammatory pathways including TWEAK seem to be implicated in pathophysiology of reproductive hormone axis disturbance in severe form of COVID-19.

StayHome: A FHIR-Native Mobile COVID-19 Symptom Tracker and Public Health Reporting Tool.

As the COVID-19 pandemic continues to unfold and states experience the impacts of reopened economies, it is critical to efficiently manage new outbreaks through widespread testing and monitoring of both new and possible cases. Existing labor-intensive public health workflows may benefit from information collection directly from individuals through patient-reported outcomes (PROs) systems. Our objective was to develop a reusable, mobile-friendly application for collecting PROs and experiences to support COVID-19 symptom self-monitoring and data sharing with appropriate public health agencies, using Fast Healthcare Interoperability Resources (FHIR) for interoperability. We conducted a needs assessment and designed and developed StayHome, a mobile PRO administration tool. FHIR serves as the primary data model and driver of business logic. Keycloak, AWS, Docker, and other technologies were used for deployment. Several FHIR modules were used to create a novel "FHIR-native" application design. By leveraging FHIR to shape not only the interface strategy but also the information architecture of the application, StayHome enables the consistent standards-based representation of data and reduces the barrier to integration with public health information systems. FHIR supported rapid application development by providing a domain-appropriate data model and tooling. FHIR modules and implementation guides were referenced in design and implementation. However, there are gaps in the FHIR specification which must be recognized and addressed appropriately. StayHome is live and accessible to the public at https://stayhome.app. The code and resources required to build and deploy the application are available from https://github.com/uwcirg/stayhome-project.

Port Baseline Biological Surveys and seaweed bioinvasions in port areas: What's the matter in the Adriatic Sea?

One of the objectives of the BALMAS project was to conduct Port Baseline Biological Surveys of native and non-indigenous benthic flora in 12 Adriatic ports. Samples of macroalgae growing on vertical artificial substrates were collected in spring and autumn 2014 and/or 2015. A total number of 248 taxa, 152 Rhodophyta, 62 Chlorophyta, and 34 Ochrophyta, were identified. Of these, 13 were non-indigenous seaweeds, mainly filamentous macroalgae, that were probably introduced through hull fouling. Some of these taxa had already been described in the study areas, others were recorded for the first time, a few were no longer detected at sites where they had previously been recorded (e.g. Sargassum muticum). Some other NISS reported for the Adriatic Sea, were not collected at any sampling site (i.e. Caulerpa cylindracea, Codium fragile). Possible reasons for the absence of these species are discussed.

Meiofaunal communities in four Adriatic ports: Baseline data for risk assessment in ballast water management.

Ports receive a variety of contaminants related to a wide range of anthropogenic activities - including ship ballast water (BW) - that ultimately find their way to sediments. Benthic meiofauna from four Adriatic ports (Ancona, Trieste, Koper, and Split) was assessed for the main environmental pollutants, to evaluate the effects of human activities on meiobenthos and identify the most appropriate descriptor to assess the ecological quality of marine ecosystems. Sediment analysis demonstrated that Trieste and Split were the most contaminated ports, followed by Koper and Ancona. All meiofaunal parameters showed high spatial and temporal variability, in line with the marked heterogeneity of the four ports. Sand, total organic carbon, and pollutants seemed to be the variables that best explained meiofaunal patterns. Community structure and rare taxa were the meiofaunal descriptors that reflected the environmental status and biological response most accurately. The present data suggest that meiofauna can be used to assess the biological impact of BW.

Strategy of port baseline surveys (PBS) in the Adriatic Sea.

Port baseline surveys (PBS) provide species inventories in and around ports, with a focus on non-indigenous species that may have been introduced by vessels, primarily via ballast water. PBS are an essential tool to support effective management strategies for non-indigenous as well as native harmful aquatic organisms and pathogens (HAOP). This paper describes the methodology of PBS that were conducted in 12 Adriatic ports. The PBS employed existing protocols that were adapted to meet the characteristics of the Adriatic sites. Their results are reported in several papers included in this special issue, each of which is devoted to a specific community. An overview of existing surveys protocols - which provide valuable support to decision-making and to design effective monitoring of non-indigenous species - is also supplied.

Non-indigenous species refined national baseline inventories: A synthesis in the context of the European Union's Marine Strategy Framework Directive.

Refined baseline inventories of non-indigenous species (NIS) are set per European Union Member State (MS), in the context of the Marine Strategy Framework Directive (MSFD). The inventories are based on the initial assessment of the MSFD (2012) and the updated data of the European Alien Species Information Network, in collaboration with NIS experts appointed by the MSs. The analysis revealed that a large number of NIS was not reported from the initial assessments. Moreover, several NIS initially listed are currently considered as native in Europe or were proven to be historical misreportings. The refined baseline inventories constitute a milestone for the MSFD Descriptor 2 implementation, providing an improved basis for reporting new NIS introductions, facilitating the MSFD D2 assessment. In addition, the inventories can help MSs in the establishment of monitoring systems of targeted NIS, and foster cooperation on monitoring of NIS across or within shared marine subregions.

Mass spawning by the date mussel Lithophaga lithophaga.

Lithophaga lithophaga is one of the commonest bivalves in the Mediterranean Sea and is present in almost every subtidal calcareous rock. Its reproductive cycle is known only from laboratory studies. Herein, we present data on the species reproductive activities based on localised but mass synchronized spawning events. The species reproduces at the end of the northern hemisphere summer and the majority of significant spawning events occur during the period between full moon and its last quarter. Calm seas are an important pre-requisite for the development of such co-ordinated mass spawning events. 'Gamete to gamete' induction seems to be the most likely proximate cue in synchronising gamete release. Spawning begins with a few individuals but spreads progressively along the coastline. In observed situations, reproductive waves finally affect between 10 and >400 m of coastline from 0 to 10 m depth and last longer than three days. In the reproductive zone, dense gamete clouds reduce visibility to zero over tens of metres along the shallow sea bed. No spawning events of such dimensions have been reported upon before for any bivalve.

Checklist of the echinoderm fauna of the Adriatic Sea.

This paper presents a checklist of echinoderm species in the Adriatic Sea. The checklist is based on the review of the available literature data, with temporal coverage from the end of the 18th century to the present day, including the most recent investigations of benthic communities. A total of 108 species have been recorded: 2 species from class Crinoidea, 23 species from class Asteroidea, 22 species from class Ophiuroidea, 22 species from class Echinoidea and 39 species from class Holothuroidea. Non-indigenous echinoderm species have not been observed.

The Mediterranean deep-water kelp Laminaria rodriguezii is an endangered species in the Adriatic Sea.

Deep-water kelps are little-known large brown algae occurring close to the lower limit of photosynthetic life in the sea. This study compares historical and recent records of the deep-water Mediterranean kelp Laminaria rodriguezii in the Adriatic Sea. Historical records include data from herbarium collections and trawling fishery expeditions in the mid-twentieth century, while recent data comprise records of the last 17 years from MEDITS expeditions, ROV surveys of historical kelp locations, benthic surveys and records by fishermen. Altogether, these findings demonstrate that the Adriatic population of L. rodriguezii has suffered a decline of more than 85 % of its historical range and is now present only around the small offshore island of Palagruza. Bottom trawling activities are presumably responsible for the disappearance elsewhere. We propose to classify L. rodriguezii as "Endangered" in the Adriatic Sea under IUCN criteria B1ab(i,iii,iv), ver 3.1. Oceanographic characteristics of the habitat suggest that besides high water transparency, presence of North Adriatic Dense Water with both strong currents and stable low temperatures of around 14 °C are essential oceanographic factors for the development of L. rodriguezii in the Central Adriatic. The origin of cold water thus differs from that at upwelling sites permitting populations of tropical deep-water kelps. The phylogenetic position of L. rodriguezii is so far unknown. DNA sequences from nuclear and cytoplasmic markers of two thalli from Croatia and the western Mediterranean confirmed that L. rodriguezii is a member of the Laminariaceae and most closely related to L. ochroleuca, L. pallida and the Brazilian deep-water kelp L. abyssalis.