Linking land-use and land-cover transitions to their ecological impact in the Amazon.

Human activities pose a major threat to tropical forest biodiversity and ecosystem services. Although the impacts of deforestation are well studied, multiple land-use and land-cover transitions (LULCTs) occur in tropical landscapes, and we do not know how LULCTs differ in their rates or impacts on key ecosystem components. Here, we quantified the impacts of 18 LULCTs on three ecosystem components (biodiversity, carbon, and soil), based on 18 variables collected from 310 sites in the Brazilian Amazon. Across all LULCTs, biodiversity was the most affected ecosystem component, followed by carbon stocks, but the magnitude of change differed widely among LULCTs and individual variables. Forest clearance for pasture was the most prevalent and high-impact transition, but we also identified other LULCTs with high impact but lower prevalence (e.g., forest to agriculture). Our study demonstrates the importance of considering multiple ecosystem components and LULCTs to understand the consequences of human activities in tropical landscapes.

Anthropogenic disturbance in tropical forests can double biodiversity loss from deforestation.

Concerted political attention has focused on reducing deforestation, and this remains the cornerstone of most biodiversity conservation strategies. However, maintaining forest cover may not reduce anthropogenic forest disturbances, which are rarely considered in conservation programmes. These disturbances occur both within forests, including selective logging and wildfires, and at the landscape level, through edge, area and isolation effects. Until now, the combined effect of anthropogenic disturbance on the conservation value of remnant primary forests has remained unknown, making it impossible to assess the relative importance of forest disturbance and forest loss. Here we address these knowledge gaps using a large data set of plants, birds and dung beetles (1,538, 460 and 156 species, respectively) sampled in 36 catchments in the Brazilian state of Pará. Catchments retaining more than 69­80% forest cover lost more conservation value from disturbance than from forest loss. For example, a 20% loss of primary forest, the maximum level of deforestation allowed on Amazonian properties under Brazil's Forest Code, resulted in a 39­54% loss of conservation value: 96­171% more than expected without considering disturbance effects. We extrapolated the disturbance-mediated loss of conservation value throughout Pará, which covers 25% of the Brazilian Amazon. Although disturbed forests retained considerable conservation value compared with deforested areas, the toll of disturbance outside Pará's strictly protected areas is equivalent to the loss of 92,000­139,000 km2 of primary forest. Even this lowest estimate is greater than the area deforested across the entire Brazilian Amazon between 2006 and 2015 (ref. 10). Species distribution models showed that both landscape and within-forest disturbances contributed to biodiversity loss, with the greatest negative effects on species of high conservation and functional value. These results demonstrate an urgent need for policy interventions that go beyond the maintenance of forest cover to safeguard the hyper-diversity of tropical forest ecosystems.

A new genus and species of Neotropical Hybosorinae Erichson, 1847 (Coleoptera: Hybosoridae).

Among the 26 Hybosorinae genera, seven are present exclusively in the Neotropical region. However, Hybosorinae from the New World have been less studied. One new genus and new species collected in Brazil is herein described to this subfamily. The genus is recognizable by the following combination of characters: labium with semicircular mentum; mandibles with lateral projection excavated, separated in the middle by longitudinal carina, inner side sheltering the labrum; antennae with nine antenomeres; scutellar shield with strong punctures at the proximal half; elytra with single rows formed by punctures; and protibia without well-defined denticles.

Effects of howler monkey reintroduction on ecological interactions and processes.

Rewilding has been an increasingly popular tool to restore plant-animal interactions and ecological processes impaired by defaunation. However, the reestablishment of such processes has seldom been assessed. We investigated the restoration of ecological interactions following the reintroduction of the brown howler monkey (Alouatta guariba) to a defaunated Atlantic forest site. We expected the reintroduction to restore plant-animal interactions and interactions between howlers and dung beetles, which promote secondary seed dispersal. We estimated the number of interactions expected to be restored by the reintroduction to provide the baseline interaction richness that could be restored. We followed the reintroduced howler monkeys twice a week for 24 months (337 hours total) to assess their diet. We used howler monkey dung in secondary seed dispersal experiments with 2484 seed mimics to estimate the removal rates by dung beetles and collected the beetles to assess community attributes. We compared the potential future contribution of howler monkeys and other frugivores to seed dispersal based on the seed sizes they disperse in other areas where they occur. In 2 years, howler monkeys consumed 60 animal-dispersed plant species out of the 330 estimated. Twenty-one dung beetle species were attracted to experimentally provided dung; most of them were tunnelers, nocturnal, and large-sized (>10 mm). On average 30% (range 0-100%) of the large seed mimics (14 mm) were moved by dung beetles. About 91% of the species consumed by howlers (size range 0.3-34.3 mm) overlapped in seed size with those removed by dung beetles. In our study area, howler monkeys may consume more large-seeded fruit species than most other frugivores, highlighting their potential to affect forest regeneration. Our results show reintroductions may effectively restore ecological links and enhance ecological processes.

Biodiversity studies through public-private partnership (PPP): The case of Fazenda São Nicolau in the northwest of Mato Grosso.

Peugeot-ONF Forest Carbon Sink Project, located at Fazenda São Nicolau (FSN) in Cotriguaçu Municipality, is a public-private initiative and has been supported by several French and Brazilian institutions. Its Research Program includes studies aiming Biodiversity Conservation, Ecology, Carbon Dynamics, Silvicultural Techniques. FSN comprises a high richness of species with more than 20 new species of beetles (Histeridae, Scarabaeidae e Melolonthidae) described among them one endemic genus. A quick overview of the SuperFamily Scarabaeoidea within the FSN area registered 260 species which nearly 100 species might be new to Science. One new species of fish as well as research with amphibian toxins as tools to treat cancer and malaria are also done with material collected at the FSN. Ecology of the decomposer´s fauna at reforestation sites showed that after 10 years, such places were more similar to native forest sites than pastures or abandoned pastures. Finally large mammals studies indicated that many large mammals use FSN as a refuge. We stress the importance to keep the FSN natural habitats linked with the Juruena National Park. The FSN contour is under heavy deforestation which will increase the species loss and turn FSN in one of the few major natural vegetation fragments.

Second rate or a second chance? Assessing biomass and biodiversity recovery in regenerating Amazonian forests.

Secondary forests (SFs) regenerating on previously deforested land account for large, expanding areas of tropical forest cover. Given that tropical forests rank among Earth's most important reservoirs of carbon and biodiversity, SFs play an increasingly pivotal role in the carbon cycle and as potential habitat for forest biota. Nevertheless, their capacity to regain the biotic attributes of undisturbed primary forests (UPFs) remains poorly understood. Here, we provide a comprehensive assessment of SF recovery, using extensive tropical biodiversity, biomass, and environmental datasets. These data, collected in 59 naturally regenerating SFs and 30 co-located UPFs in the eastern Amazon, cover >1,600 large- and small-stemmed plant, bird, and dung beetles species and a suite of forest structure, landscape context, and topoedaphic predictors. After up to 40 years of regeneration, the SFs we surveyed showed a high degree of biodiversity resilience, recovering, on average among taxa, 88% and 85% mean UPF species richness and composition, respectively. Across the first 20 years of succession, the period for which we have accurate SF age data, biomass recovered at 1.2% per year, equivalent to a carbon uptake rate of 2.25 Mg/ha per year, while, on average, species richness and composition recovered at 2.6% and 2.3% per year, respectively. For all taxonomic groups, biomass was strongly associated with SF species distributions. However, other variables describing habitat complexity-canopy cover and understory stem density-were equally important occurrence predictors for most taxa. Species responses to biomass revealed a successional transition at approximately 75 Mg/ha, marking the influx of high-conservation-value forest species. Overall, our results show that naturally regenerating SFs can accumulate substantial amounts of carbon and support many forest species. However, given that the surveyed SFs failed to return to a typical UPF state, SFs are not substitutes for UPFs.

Correction of the type species of the South American genus Gromphas Brullé, 1837 (Coleoptera: Scarabaeidae: Scarabaeinae: Phanaeini).

Recently, we (Cupello & Vaz-de-Mello, 2013) presented a taxonomic revision of the dung beetle genus Gromphas Brullé, 1837 in which we recognized the validity of five species: Gromphas aeruginosa (Perty, 1830), G. amazonica Bates, 1870, G. dichroa Blanchard, 1846, G. inermis Harold, 1869, and G. lemoinei Waterhouse, 1891. In that work, we also confirmed that Gromphas was described by Brullé (1837) without any included species and that the widely cited name "Gromphas lacordairei Brullé" was never formally described or cited by Brullé and, in fact, all citations to this name refer to G. lacordairii Burmeister, 1874, a junior synonym of G. inermis Harold, 1869. Thus, the question of the identity of the type species of Gromphas remained open. 

A new giant species of Deltochilum subgenus Deltohyboma (Coleoptera, Scarabaeidae, Scarabaeinae) from Colombia, with notes on D. spinipes Paulian, 1938.

Deltochilum (Deltohyboma) gigante sp. nov., from Parque Nacional Las Cuevas de los Guácharos, Huila, Colombia is described based on differences in external and genital morphology. Its diagnostic characters are provided and illustrated. Lectotype and paralectotypes for D. spinipes, a close relative to the new species, are designated.

A New Species of Megaceropsis Dechambre, 1976 and a New Record of Megaceropsis quadridentata Dechambre, 1976 (Coleoptera, Melolonthidae, Dynastinae, Oryctini).

Megaceropsis Dechambre, 1976 (Coleoptera, Melolonthidae, Dynastinae, Oryctini) is a South American genus with two known species until now: Megaceropsis quadridentata Dechambre, 1976 and Megaceropsis lecourti Dechambre, 1996. We describe a third species herein: Megaceropsis kleytoni sp. nov., from Brazil. Illustrations, a distributional map, and an identification key including all Megaceropsis species are provided. Additionally, a first record of M. quadridentata from Brazil is presented.

Testing and optimizing metabarcoding of iDNA from dung beetles to sample mammals in the hyperdiverse Neotropics.

Over the past few years, insects have been used as samplers of vertebrate diversity by assessing the ingested-derived DNA (iDNA), and dung beetles have been shown to be a good mammal sampler given their broad feeding preference, wide distribution and easy sampling. Here, we tested and optimized the use of iDNA from dung beetles to assess the mammal community by evaluating if some biological and methodological aspects affect the use of dung beetles as mammal species samplers. We collected 403 dung beetles from 60 pitfall traps. iDNA from each dung beetle was sequenced by metabarcoding using two mini-barcodes (12SrRNA and 16SrRNA). We assessed whether dung beetles with different traits related to feeding, nesting and body size differed in the number of mammal species found in their iDNA. We also tested differences among four killing solutions in preserving the iDNA and compared the effectiveness of each mini barcode to recover mammals. We identified a total of 50 mammal OTUs (operational taxonomic unit), including terrestrial and arboreal species from 10 different orders. We found that at least one mammal-matching sequence was obtained from 70% of the dung beetle specimens. The number of mammal OTUs obtained did not vary with dung beetle traits as well as between the killing solutions. The 16SrRNA mini-barcode recovered a higher number of mammal OTUs than 12SrRNA, although both sets were partly non-overlapping. Thus, the complete mammal diversity may not be achieved by using only one of them. This study refines the methodology for routine assessment of tropical mammal communities via dung beetle 'samplers' and its universal applicability independently of the species traits of local beetle communities.

Trait-dependent response of dung beetle populations to tropical forest conversion at local and regional scales.

Comparative analyses that link information on species' traits, environmental change, and organism response have rarely identified unambiguous trait correlates of vulnerability. We tested if species' traits could predict local-scale changes in dung beetle population response to three levels of forest conversion intensity within and across two biogeographic regions (the Neotropics and Afro-Eurasian tropics). We combined biodiversity surveys, a global molecular phylogeny, and information on three species' traits hypothesized to influence vulnerability to forest conversion to examine (1) the consistency of beetle population response across regions, (2) if species' traits could predict this response, and (3) the cross-regional consistency of trait-response relationships. Most beetle populations declined following any degree of forest conversion; these declines were strongest for Neotropical species. The relationship between traits and population trend was greatly influenced by local and biogeographic context. We discuss the ability of species' traits to explain population trends and suggest several ways to strengthen trait-response models.

Diversity and seasonality of Scarabaeinae (Coleoptera: Scarabaeidae) in forest fragments in Santa Maria, Rio Grande do Sul, Brazil.

Scarabaeinae specimens were collected with the use of pitfall traps baited with human excrement, rotten meat and rotting banana, between May 2009 and April 2010, in three forest fragments in Santa Maria, Rio Grande do Sul, Brazil: 'Morro do Elefante' (MOEL), 'Morro do Cerrito' (MOCE) and 'Campus da Universidade Federal de Santa Maria' (UFSM). A total of 19,699 individuals belonging to 33 species were collected. Canthidium aff. trinodosum Boheman, 1858, Canthon latipes Blanchard, 1845, Dichotomius assifer (Eschscholtz 1822), Eurysternus caribaeus (Herbst 1789), Canthidium sp. and Canthon lividus Blanchard, 1845, were the most abundant species. MOEL showed the greatest richness, MOCE the greatest abundance, while UFSM showed the lowest values of richness and abundance. The greatest similarity (qualitative and quantitative) was found between MOEL and MOCE, while the lowest occurred between MOCE and UFSM. Only 51% of the species were common to all three fragments. The richness and abundance of Scarabaeinae were positively correlated with the air temperature. The richness of the fragment decreased according to the smaller size and the greater degree of disturbance of vegetation structure.

Taxonomic revision of the South American dung beetle genus Gromphas Brullé, 1837 (Coleoptera: Scarabaeidae: Scarabaeinae: Phanaeini: Gromphadina).

As defined here, Phanaeini comprises two subtribes, Gromphadina, with Gromphas and Oruscatus, and Phanaeina, with 10 genera including Bolbites. Gromphas occurs east of the Andes and includes five species: G aeruginosa (Perty, 1830) (= G lacordairei Blanchard, 1846); G amazonica Bates, 1870; G. dichroa Blanchard, 1846; G inermis Harold, 1869 (= G. lacordairii Burmeister, 1874; G. lacordairei bipunctata d'Olsoufieff, 1924, new synonymy); and G. lemoinei Waterhouse, 1891. Brullé (1837) never mentioned or described "G. larcordairei" and all citations to "G lacordairei Brullé" refer in fact to G. larcordairii Burmeister, ajunior objective synonym of G. inermis Harold. The first author to include species in Gromphas was Blanchard (1846), and one of these species, G. dichroa Blanchard, is here designated as the type species of Gromphas. Gromphas lemoinei Waterhouse is here revalidated and is distinguished from G. aeruginosa (Perty) mainly by the shape of the pronotal prominence. Lectotypes are designated for G. amazonica, G. inermis, and G. lacordairei bipunctata. Redescriptions of the genus and its species, an identification key and a distribution map are presented, as well illustrations of all species, including the type specimens of G. aeruginosa, G. lemoinei, and G. amazonica.

New evidence for the validity of Coprophanaeus (C.) terrali Arnaud, 2002 (Coleoptera: Scarabaeidae: Scarabaeinae: Phanaeini), a dung beetle from Brazil.

Coprophanaeus terrali, a species based on a single male from Sinop, Brazil, had its validity questioned recently when it was suggested that its tetratuberculate cephalic carina could be just an individual variation of C. dardanus (MacLeay, 1819). In this work, based on three additional males and two females collected near the type locality, we present new evidence supporting the validity of this species, discuss the variation of the male cephalic carina and describe the female morphology for the first time.

New brachypterous species of Dichotomius Hope, with taxonomic notes in the subgenus Luederwaldtinia Martínez (Coleoptera: Scarabaeidae: Scarabaeinae).

An overview of the subgenus Dichotomius (Luederwaldtnia) and its species groups is presented with species groups proposed and a provisional identification key provided. Dichotomius (Luederwaldtnia) vidaurrei, a brachypterous new species from Bolivia, is described. Another brachypterous species, from Brazil, D. mysticus (Luederwaldt) is redescribed. Dichotomius paraguayanus Gandini & Aguilar is synonymized with Canthidium kelleri (Martínez, Halffter & Pereira). Some aspects of the evolution of flightlessness in Dichotomius are discussed.

A Taxonomic Revision of the Dichotomius reclinatus (Felsche, 1901) Species Group (Coleoptera: Scarabaeidae: Scarabaeinae).

The taxonomic revision of the Dichotomius reclinatus species group (Coleoptera: Scarabaeidae: Scarabaeinae: Dichotomius Hope, 1838) sensu Arias-Buriticá and Vaz-de-Mello (2019) is presented. The group comprises four species previously included in the Dichotomius buqueti species group: Dichotomius horridus (Felsche, 1911) from Brazil, French Guiana, and Suriname; Dichotomius nimuendaju (Luederwaldt, 1925) from Bolivia, Brazil, and Peru; Dichotomius quadrinodosus (Felsche, 1901) from Brazil; and Dichotomius reclinatus (Felsche, 1901) from Colombia and Ecuador. A definition of the D. reclinatus species group and an identification key are presented. In the key we included to Dichotomius camposeabrai Martínez, 1974, this species due the external morphology can be confused with the D. reclinatus species group and for the first time photographs of males and female of this species are presented. For each species of the D. reclinatus species group, the following information is provided: taxonomic history, citation of the species in published literature, redescription, list of material examined, photographs of the external morphology, illustrations of male genital organs and the endophallites, and distribution map.

Bait attractiveness changes community metrics in dung beetles (Coleoptera: Scarabaeidae: Scarabaeinae).

Species relative abundance (SRA) is an essential attribute of biotic communities, which can provide an accurate description of community structure. However, the sampling method used may have a direct influence on SRA quantification, since the use of attractants (e.g., baits, light, and pheromones) can introduce additional sources of variation in trap performance. We tested how sampling aided by baits affect community data and therefore alter derived metrics. We tested our hypothesis on dung beetles using data from flight interception traps (FITs) as a baseline to evaluate baited pitfall trap performance. Our objective was to assess the effect of bait attractiveness on estimates of SRA and assemblage metrics when sampled by pitfall traps baited with human feces.Dung beetles were sampled at three terra firme primary forest sites in the Brazilian Amazon. To achieve our objective, we (i) identified species with variable levels of attraction to pitfall baited with human feces; (ii) assessed differences in SRA; and (iii) assessed the effect of bait on the most commonly used diversity metrics derived from relative abundance (Shannon and Simpson indices). We identified species less and highly attracted to the baits used, because most attracted species showed greater relative abundances within baited pitfall traps samples compared with our baseline. Assemblages sampled by baited pitfall traps tend to show lower diversity and higher dominance than those sampled by unbaited FITs. Our findings suggest that for ecological questions focused on species relative abundance, baited pitfall traps may lead to inaccurate conclusions regarding assemblage structure. Although tested on dung beetles, we suggest that the same effect could be observed for other insect taxa that are also sampled with baited traps. We highlight a need for further studies on other groups to elucidate any potential effects of using baits.

Dung beetles from two sustainable-use protected forests in the Brazilian Amazon.

Background: The Amazon Forest is one of the world's most biodiverse ecosystems and yet its protected areas are understudied concerning insects and other invertebrates. These organisms are essential for tropical forests due to their ecological processes, with some species being very sensitive to habitat disturbances. Dung beetles (Coleoptera, Scarabaeidae, Scarabaeinae) have been used as bioindicators for more than 30 years and were surveyed to assess the insect biodiversity of two sustainable-use forest reserves in the Brazilian Amazon. New information: We report inventories of dung beetles from two Amazonian forest reserves in Pará State, Brazil: the Tapajós National Forest and the Carajás National Forest. Surveys were carried out with baited-pitfall traps installed in 2010, 2016, 2017 and 2019. We collected a total of 3,772 individuals from 19 genera and 96 species. We highlight the importance of Amazonian protected areas as refugia for insect biodiversity, particularly dung beetles, which contribute to many key ecosystem processes.

Pervasive gaps in Amazonian ecological research.

Biodiversity loss is one of the main challenges of our time,1,2 and attempts to address it require a clear understanding of how ecological communities respond to environmental change across time and space.3,4 While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes,5,6,7 vast areas of the tropics remain understudied.8,9,10,11 In the American tropics, Amazonia stands out as the world's most diverse rainforest and the primary source of Neotropical biodiversity,12 but it remains among the least known forests in America and is often underrepresented in biodiversity databases.13,14,15 To worsen this situation, human-induced modifications16,17 may eliminate pieces of the Amazon's biodiversity puzzle before we can use them to understand how ecological communities are responding. To increase generalization and applicability of biodiversity knowledge,18,19 it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple organism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region's vulnerability to environmental change. 15%-18% of the most neglected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lost.

Towards a comprehensive taxonomic revision of the Neotropical dung beetle subgenus Deltochilum (Deltohyboma) Lane, 1946 (Coleoptera: Scarabaeidae: Scarabaeinae): Division into species-groups.

Deltochilum Eschscholtz, 1822 is perhaps the most speciose genus of the tribe Deltochilini sensu Tarasov & Dimitrov (2016) (Scarabaeidae: Scarabaeinae) and has been traditionally divided into eight subgenera. Among them, the subgenus Deltohyboma Lane, 1946, is the most speciose with 47 species, five of which are described here (D. genieri sp. nov., D. gilli sp. nov., D. susanae sp. nov., D. bolivariensis sp. nov. and D. inesae sp. nov.), and at least 165 species still undescribed. Due to the large number of species, and for practical purposes, the subgenus is here divided into 19 species-groups, with D. inesae sp. nov. left as incertae sedis. This division into species-groups will help in the reliable identification of species and will aid in the completion of the revision of subgenus. This report is the first part of the taxonomic revision of the subgenus Deltohyboma; it is based on the examination of all type specimens and almost 9,800 specimens of which approximately 1,200, mostly males, had their genitalia studied. The 19 species-groups recognized here are based mainly on characters described for the first time for Deltohyboma, namely, the state of a) the anterior margin of the clypeus (between the clypeal teeth), b) the internal margin of hypomera, c) the ventral face of the protibia, d) the posterior margin of the metafemur, and e) several new characters resulting from the first detailed study of the aedeagus and the endophallus of the group. Diagnosis, description, geographic distribution, composition and identifications keys (for males as well as males and females) for the species-groups are provided.