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1.
J Integr Plant Biol ; 63(10): 1787-1800, 2021 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-34236765

RESUMO

The formation of nitrogen-fixing no dules on legume roots requires the coordination of infection by rhizobia at the root epidermis with the initiation of cell divisions in the root cortex. During infection, rhizobia attach to the tip of elongating root hairs which then curl to entrap the rhizobia. However, the mechanism of root hair deformation and curling in response to symbiotic signals is still elusive. Here, we found that small GTPases (MtRac1/MtROP9 and its homologs) are required for root hair development and rhizobial infection in Medicago truncatula. Our results show that the Nod factor receptor LYK3 phosphorylates the guanine nucleotide exchange factor MtRopGEF2 at S73 which is critical for the polar growth of root hairs. In turn, phosphorylated MtRopGEF2 can activate MtRac1. Activated MtRac1 was found to localize at the tips of root hairs and to strongly interact with LYK3 and NFP. Taken together, our results support the hypothesis that MtRac1, LYK3, and NFP form a polarly localized receptor complex that regulates root hair deformation during rhizobial infection.


Assuntos
Fatores de Troca do Nucleotídeo Guanina/metabolismo , Medicago truncatula/enzimologia , Proteínas de Plantas/metabolismo , Nodulação , Proteínas rac1 de Ligação ao GTP/metabolismo , Medicago truncatula/crescimento & desenvolvimento , Medicago truncatula/microbiologia , Fosforilação , Raízes de Plantas/enzimologia , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , Simbiose
2.
Appl Soft Comput ; 113: 107946, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34646110

RESUMO

The COVID-19 epidemic has had a great adverse impact on the world, having taken a heavy toll, killing hundreds of thousands of people. In order to help the world better combat COVID-19 and reduce its death toll, this study focuses on the COVID-19 mortality. First, using the multiple stepwise regression analysis method, the factors from eight aspects (economy, society, climate etc.) that may affect the mortality rates of COVID-19 in various countries is examined. In addition, a two-layer nested heterogeneous ensemble learning-based prediction method that combines linear regression (LR), support vector machine (SVM), and extreme learning machine (ELM) is developed to predict the development trends of COVID-19 mortality in various countries. Based on data from 79 countries, the experiment proves that age structure (proportion of the population over 70 years old) and medical resources (number of beds) are the main factors affecting the mortality of COVID-19 in each country. In addition, it is found that the number of nucleic acid tests and climatic factors are correlated with COVID-19 mortality. At the same time, when predicting COVID-19 mortality, the proposed heterogeneous ensemble learning-based prediction method shows better prediction ability than state-of-the-art machine learning methods such as LR, SVM, ELM, random forest (RF), long short-term memory (LSTM) etc.

3.
Plant Cell ; 27(3): 806-22, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25794934

RESUMO

Rhizobia preferentially enter legume root hairs via infection threads, after which root hairs undergo tip swelling, branching, and curling. However, the mechanisms underlying such root hair deformation are poorly understood. Here, we showed that a type II small GTPase, ROP10, of Medicago truncatula is localized at the plasma membrane (PM) of root hair tips to regulate root hair tip growth. Overexpression of ROP10 and a constitutively active mutant (ROP10CA) generated depolarized growth of root hairs, whereas a dominant negative mutant (ROP10DN) inhibited root hair elongation. Inoculated with Sinorhizobium meliloti, the depolarized swollen and ballooning root hairs exhibited extensive root hair deformation and aberrant infection symptoms. Upon treatment with rhizobia-secreted nodulation factors (NFs), ROP10 was transiently upregulated in root hairs, and ROP10 fused to green fluorescent protein was ectopically localized at the PM of NF-induced outgrowths and curls around rhizobia. ROP10 interacted with the kinase domain of the NF receptor NFP in a GTP-dependent manner. Moreover, NF-induced expression of the early nodulin gene ENOD11 was enhanced by the overexpression of ROP10 and ROP10CA. These data suggest that NFs spatiotemporally regulate ROP10 localization and activity at the PM of root hair tips and that interactions between ROP10 and NF receptors are required for root hair deformation and continuous curling during rhizobial infection.


Assuntos
Medicago truncatula/metabolismo , Medicago truncatula/microbiologia , Meristema/crescimento & desenvolvimento , Meristema/metabolismo , Proteínas Monoméricas de Ligação ao GTP/metabolismo , Proteínas de Plantas/metabolismo , Proteínas de Bactérias/metabolismo , Membrana Celular/metabolismo , Polaridade Celular , Regulação da Expressão Gênica de Plantas , Proteínas de Fluorescência Verde/metabolismo , Meristema/microbiologia , Dados de Sequência Molecular , Mutação/genética , Fenótipo , Doenças das Plantas/microbiologia , Epiderme Vegetal/citologia , Nodulação , Estrutura Terciária de Proteína , Transdução de Sinais , Sinorhizobium meliloti/fisiologia , Frações Subcelulares/metabolismo , Nicotiana/citologia , Transformação Genética , Regulação para Cima
4.
Sensors (Basel) ; 18(11)2018 Nov 16.
Artigo em Inglês | MEDLINE | ID: mdl-30453496

RESUMO

Residence time difference (RTD) fluxgate sensor is a potential device to measure the DC or low-frequency magnetic field in the time domain. Nevertheless, jitter noise and magnetic noise severely affect the detection result. A novel post-processing algorithm for jitter noise reduction of RTD fluxgate output strategy based on the single-frequency time difference (SFTD) method is proposed in this study to boost the performance of the RTD system. This algorithm extracts the signal that has a fixed frequency and preserves its time-domain information via a time⁻frequency transformation method. Thereby, the single-frequency signal without jitter noise, which still contains the ambient field information in its time difference, is yielded. Consequently, compared with the traditional comparator RTD method (CRTD), the stability of the RTD estimation (in other words, the signal-to-noise ratio of residence time difference) has been significantly boosted with sensitivity of 4.3 µs/nT. Furthermore, the experimental results reveal that the RTD fluxgate is comparable to harmonic fluxgate sensors, in terms of noise floor.

5.
Sensors (Basel) ; 17(10)2017 Oct 12.
Artigo em Inglês | MEDLINE | ID: mdl-29023409

RESUMO

The performance of Residence Times Difference (RTD)-fluxgate sensors is closely related to the time difference readout technique. The noise of the induction signal affects the quality of the output signal of the following circuit and the time difference detection, so the stability of the sensor is limited. Based on the analysis of the uncertainty of the RTD-fluxgate using the Bidirectional Magnetic Saturation Time Difference (BMSTD) readout scheme, the relationship between the saturation state of the magnetic core and the target (DC) magnetic field is studied in this article. It is proposed that combining the excitation and induction signals can provide the Negative Magnetic Saturation Time (NMST), which is a detection quantity used to measure the target magnetic field. Also, a mathematical model of output response between NMST and the target magnetic field is established, which analyzes the output NMST and sensitivity of the RTD-fluxgate sensor under different excitation conditions and is compared to the BMSTD readout scheme. The experiment results indicate that this technique can effectively reduce the noise influence. The fluctuation of time difference is less than ±0.1 µs in a target magnetic field range of ±5 × 104 nT. The accuracy and stability of the sensor are improved, so the RTD-fluxgate using the readout technique of high stability time difference is suitable for detecting weak magnetic fields.

6.
Fungal Genet Biol ; 91: 32-42, 2016 06.
Artigo em Inglês | MEDLINE | ID: mdl-27037138

RESUMO

Superoxide dismutases (SODs) are scavengers of superoxide radicals, one of the main reactive oxygen species (ROS) in the cell. SOD-based ROS scavenging system constitutes the frontline defense against intra- and extracellular ROS, but the roles of SODs in the important cereal pathogen Fusarium graminearum are not very clear. There are five SOD genes in F. graminearum genome, encoding cytoplasmic Cu-Zn SOD1 and MnSOD3, mitochondrial MnSOD2 and FeSOD4, and extracellular CuSOD5. Previous studies reported that the expression of SOD1 increased during infection of wheat coleoptiles and florets. In this work we showed that the recombinant SOD1 protein had the superoxide dismutase activity in vitro, and that the SOD1-mRFP fusion protein localized in the cytoplasm of F. graminearum. The Δsod1 mutants had slightly reduced hyphal growth and markedly increased sensitivity to the intracellular ROS generator menadione. The conidial germination under extracellular oxidative stress was significantly delayed in the mutants. Wheat floret infection assay showed that the Δsod1 mutants had a reduced pathogenicity. Furthermore, the Δsod1 mutants had a significant reduction in production of deoxynivalenol mycotoxin. Our results indicate that the cytoplasmic Cu-Zn SOD1 affects fungal growth probably depending on detoxification of intracellular superoxide radicals, and that SOD1-mediated deoxynivalenol production contributes to the virulence of F. graminearum in wheat head infection.


Assuntos
Fusarium/genética , Mitocôndrias/genética , Estresse Oxidativo/genética , Superóxido Dismutase-1/genética , Citoplasma/enzimologia , Fusarium/enzimologia , Fusarium/patogenicidade , Hifas/genética , Hifas/crescimento & desenvolvimento , Mitocôndrias/enzimologia , Espécies Reativas de Oxigênio/metabolismo , Superóxido Dismutase-1/metabolismo , Superóxidos/metabolismo , Triticum/microbiologia
7.
Sensors (Basel) ; 16(4)2016 Apr 12.
Artigo em Inglês | MEDLINE | ID: mdl-27077862

RESUMO

The air-core coil sensor (ACS) is widely used as a transducer to measure the variation in magnetic fields of a helicopter transient electromagnetic (TEM) system. A high periodic emitting current induces the magnetic field signal of the underground medium. However, such current also generates a high primary field signal that can affect the received signal of the ACS and even damage the receiver. To increase the dynamic range of the received signal and to protect the receiver when emitting current rises/falls, the combination of ACS with magnetic flux compensation structure (bucking coil) is necessary. Moreover, the optimized ACS, which is composed of an air-core coil and a differential pre-amplifier circuit, must be investigated to meet the requirements of the helicopter TEM system suited to rapid surveying for shallow buried metal mine in rough topography. Accordingly, two ACSs are fabricated in this study, and their performance is verified and compared inside a magnetic shielding room. Using the designed ACSs, field experiments are conducted in Baoqing County. The field experimental data show that the primary field response can be compensated when the bucking coil is placed at an appropriate point in the range of allowed shift distance beyond the center of the transmitting coil and that the damage to the receiver induced by the over-statured signal can be solved. In conclusion, a more suitable ACS is adopted and is shown to have better performance, with a mass of 2.5 kg, resultant effective area of 11.6 m² (i.e., diameter of 0.496 m), 3 dB bandwidth of 66 kHz, signal-to-noise ratio of 4 (i.e., varying magnetic field strength of 0.2 nT/s), and normalized equivalent input noise of 3.62 nV/m².

8.
Sensors (Basel) ; 15(9): 23325-40, 2015 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-26389908

RESUMO

An air-coil sensor (ACS) is a type of induction magnetometer used as a transducer to measure the variations of a magnetic field. This device is widely applied in helicopter transient electromagnetic method (TEM) exploration. Most helicopter TEM explorations generate common-mode noise and require extreme ACS specifications, both of which inevitably challenge geophysical explorations. This study proposes a differential air-core coil combined with a differential pre-amplifier to reduce the common-mode noise induced in exploration surveys. To satisfy the stringent performance requirements, including the geometric parameters and electrical specifications, the physical calculations in theory and the equivalent schematic of an ACS with noise location are investigated, respectively. The theory calculation and experimental result for the optimized ACS are then compared on the basis of a differential structure. Correspondingly, an ACS is constructed with a mass, resultant effective area, 3 dB bandwidth, signal-to-noise ratio, and normalized equivalent input noise of 2.5 kg, 5.5 m² (diameter is 0.5 m), 71 kHz, 20 (the varying magnetic field strength is 1 nT/s), and 5.43 nV/m², respectively. These data are superior to those of the traditional induction sensor 3D-3. Finally, a field experiment is performed with a fabricated sensor to show a valid measurement of the time-varying magnetic field of a helicopter TEM system based on the designed ACS.

9.
New Phytol ; 201(2): 531-544, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24164597

RESUMO

The ta-siRNA pathway is required for lateral organ development, including leaf patterning, flower differentiation and lateral root growth. Legumes can develop novel lateral root organs--nodules--resulting from symbiotic interactions with rhizobia. However, ta-siRNA regulation in nodule formation remains unknown. To explore ta-siRNA regulation in nodule formation, we investigated the roles of REL3, a key component of TAS3 ta-siRNA biogenesis, during nodulation in Lotus japonicus. We characterized the symbiotic phenotypes of the TAS3 ta-siRNA defective rel3 mutant, and analyzed the responses of the rel3 mutant to auxin and ethylene in order to gain insight into TAS3 ta-siRNA regulation of nodulation. The rel3 mutant produced fewer pink nitrogen-fixing nodules, with substantially decreased infection frequency and nodule initiation. Moreover, the rel3 mutant was more resistant than wild-type to 1-naphthaleneacetic acid (NAA) and N-1-naphthylphthalamic acid (NPA) in root growth, and exhibited insensitivity to auxins but greater sensitivity to auxin transport inhibitors during nodulation. Furthermore, the rel3 mutant has enhanced root-specific ethylene sensitivity and altered responses to ethylene during nodulation; the low-nodulating phenotype of the rel3 mutant can be restored by ethylene synthesis inhibitor L-α-(2-aminoethoxyvinyl)-glycine (AVG) or action inhibitor Ag(+). The REL3-mediated TAS3 ta-siRNA pathway regulates nodulation by integrating ethylene and auxin signaling.


Assuntos
Etilenos/metabolismo , Ácidos Indolacéticos/metabolismo , Lotus/metabolismo , Proteínas de Plantas/fisiologia , Nodulação/genética , RNA Interferente Pequeno/fisiologia , Mesorhizobium/fisiologia , Fenótipo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Interferência de RNA , RNA Interferente Pequeno/genética , RNA Interferente Pequeno/metabolismo , Transdução de Sinais , Simbiose/genética
10.
Sensors (Basel) ; 13(9): 11539-52, 2013 Sep 02.
Artigo em Inglês | MEDLINE | ID: mdl-24002230

RESUMO

Based on the core hysteresis features, the RTD-fluxgate core, while working, is repeatedly saturated with excitation field. When the fluxgate simulates, the accurate characteristic model of the core may provide a precise simulation result. As the shape of the ideal hysteresis loop model is fixed, it cannot accurately reflect the actual dynamic changing rules of the hysteresis loop. In order to improve the fluxgate simulation accuracy, a dynamic hysteresis loop model containing the parameters which have actual physical meanings is proposed based on the changing rule of the permeability parameter when the fluxgate is working. Compared with the ideal hysteresis loop model, this model has considered the dynamic features of the hysteresis loop, which makes the simulation results closer to the actual output. In addition, other hysteresis loops of different magnetic materials can be explained utilizing the described model for an example of amorphous magnetic material in this manuscript. The model has been validated by the output response comparison between experiment results and fitting results using the model.


Assuntos
Campos Magnéticos , Magnetismo/instrumentação , Magnetismo/métodos , Modelos Teóricos , Dinâmica não Linear , Simulação por Computador
11.
Rev Sci Instrum ; 94(5)2023 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-37227194

RESUMO

In a helicopter transient electromagnetic system, the quality of the transmitting-current waveform will affect the geological exploration effect. In this paper, a helicopter TEM inverter, based on a single-clamp source and pulse width modulation technology, is designed and analyzed. Besides, it finds that there will be current oscillation in the early measuring stage. For this problem, first, the factors that cause the current oscillation are analyzed. Then, it is proposed to apply the RC snubber to eliminate this current oscillation. Since the imaginary part of the pole is the essence of oscillation, configuring the pole can eliminate the current oscillation. By establishing the early measuring stage system model, the characteristic equation of the load current with the snubber circuit is deduced. Next, the characteristic equation is solved by the exhaustive method and the root locus method to obtain the parametric region that eliminates the oscillation. Finally, through simulation and experimental verification, the proposed snubber circuit design method can be used to eliminate the early measuring stage current oscillation. Compared to the method of switching into the damping circuit, it can achieve the same performance, more important is that there is no switching action and it is easy to achieve.

12.
Environ Sci Pollut Res Int ; 30(48): 106598-106610, 2023 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-37733201

RESUMO

Harmless disposal and reutilization of electroplating sludge (ES) attract growing interests due to the high content of heavy metals, which requires economical-affordable and environmentally friendly processing technologies. Main reutilization alternatives in China, i.e., acid leaching, bioleaching, smelting, ironmaking blast furnace co-processing (IBFC), and cement kiln co-processing (CKC), were evaluated and compared via life cycle assessment (LCA) and life cycle costing (LCC) methods. In addition, the heavy metal recovery potential of these scenarios was also evaluated to focus on the sustainable use of metal resources. LCA results show that acid leaching outperforms other scenarios due to the environmental benefits originating from recovering heavy metals, while smelting exhibits the worst due to high energy consumption. The environmental contribution analysis reveals that the product nickel sulfate has a significant positive impact on acid leaching and bioleaching scenarios, and energy consumption is the key factor for smelting, IBFC, and CKC. LCC results show that bioleaching outperforms others, while CKC performs the worst because only inorganic materials are utilized. Bioleaching has the lowest externality cost while CKC has the highest. The heavy metal recovery assessment indicates that bioleaching exhibits the greatest potential with recovery rates of 99%, 99%, 93%, 96%, and 95% for Cu, Cr, Ni, Zn, and Fe, respectively. In contrast, the target heavy metal recovery rate for both acid leaching and smelting is 93%. Acid leaching and bioleaching scenarios are more advantageous from a comprehensive comparison.


Assuntos
Metais Pesados , Esgotos , Galvanoplastia , Metais Pesados/análise , China
13.
IEEE Trans Cybern ; 52(12): 12623-12637, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34546933

RESUMO

Skin lesion diagnosis is a key step for skin cancer screening, which requires high accuracy and interpretability. Though many computer-aided methods, especially deep learning methods, have made remarkable achievements in skin lesion diagnosis, their generalization and interpretability are still a challenge. To solve this issue, we propose an interpretability-based multimodal convolutional neural network (IM-CNN), which is a multiclass classification model with skin lesion images and metadata of patients as input for skin lesion diagnosis. The structure of IM-CNN consists of three main paths to deal with metadata, features extracted from segmented skin lesion with domain knowledge, and skin lesion images, respectively. We add interpretable visual modules to provide explanations for both images and metadata. In addition to area under the ROC curve (AUC), sensitivity, and specificity, we introduce a new indicator, an AUC curve with a sensitivity larger than 80% (AUC_SEN_80) for performance evaluation. Extensive experimental studies are conducted on the popular HAM10000 dataset, and the results indicate that the proposed model has overwhelming advantages compared with popular deep learning models, such as DenseNet, ResNet, and other state-of-the-art models for melanoma diagnosis. The proposed multimodal model also achieves on average 72% and 21% improvement in terms of sensitivity and AUC_SEN_80, respectively, compared with the single-modal model. The visual explanations can also help gain trust from dermatologists and realize man-machine collaborations, effectively reducing the limitation of black-box models in supporting medical decision making.


Assuntos
Diagnóstico por Computador , Redes Neurais de Computação , Humanos
14.
Rev Sci Instrum ; 93(7): 074501, 2022 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-35922297

RESUMO

An m-sequence is applied to the helicopter-borne electromagnetic method system for the first time, and there are many problems to be solved, one of which is the detection of the quality of the transmitting current waveform, which directly affects the resource survey results. In this research, we found that the triple-correlation function (TCF) can reveal the bit integrity characteristics of the m-sequence encoded transmitting current. On this basis, this paper proposes to extract the three-dimensional information of the normalized TCF plot by using a peak detection method and, then, proposes to use a dual-threshold method to clarify the detection results. The whole process realizes the fault detection of the transmitting current waveform. We propose a reasonable transmitting current modeling method and conduct 1200 random experiments in 12 groups. The statistics of the experimental results show that when the number of missing bits is 1, 2, 4, and 8, the fault detection accuracy can reach more than 83%. A comparative experiment using the Field Programmable Gate Array. in the laboratory validates the feasibility of the fault detection method. This method is beneficial to improve the quality of detection data and avoid economic losses caused by invalid detection flights.

15.
Waste Manag ; 154: 160-174, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36244205

RESUMO

The dispersed sources and inconvenient transportation of rural domestic waste (RDW) lead to difficult centralized treatment. Gasification is suitable for decentralized waste treatment, which can effectively avoid RDW long-distance transportation and reduce dioxin emissions compared with small-scale incineration. Hence, economically-affordable and environmentally-friendly RDW treatment models with different gasification scales are required, and village, town and county models were compared via life cycle assessment (LCA) and life cycle cost (LCC) methods in this study. Furthermore, scenario analysis investigated waste sorting based on two food waste (FW) treatment technologies, different FW separate collection efficiency, and electricity recovery to explore the environmental and economic improvement potentials of three models. LCA results show that electricity consumption and direct emissions are significant contributors to environmental impacts, and the county model outperforms village and town models. Moreover, transportation accounts for 6% of the overall environmental impact in the county model. Scenario analysis reveals that waste sorting and electricity recovery can reduce the overall environmental impact by 29% to 146% for three models. LCC results demonstrate that the town model delivers the lowest economic cost, while the village model is the highest. In scenario analysis, resource utilization of FW and electricity recovery of other waste exhibit promising economic benefits. The findings provide comprehensive references for sustainable RDW treatment.

16.
Cell Rep ; 41(13): 111877, 2022 12 27.
Artigo em Inglês | MEDLINE | ID: mdl-36577386

RESUMO

The fungus Fusarium graminearum causes a devastating disease Gibberella stalk rot of maize. Our knowledge of molecular interactions between F. graminearum effectors and maize immunity factors is lacking. Here, we show that a group of cysteine-rich common in fungal extracellular membrane (CFEM) domain proteins of F. graminearum are required for full virulence in maize stalk infection and that they interact with two secreted maize proteins, ZmLRR5 and ZmWAK17ET. ZmWAK17ET is an alternative splicing isoform of a wall-associated kinase ZmWAK17. Both ZmLRR5 and ZmWAK17ET interact with the extracellular domain of ZmWAK17. Transgenic maize overexpressing ZmWAK17 shows increased resistance to F. graminearum, while ZmWAK17 mutants exhibit enhanced susceptibility to F. graminearum. Transient expression of ZmWAK17 in Nicotiana benthamiana triggers hypersensitive cell death, whereas co-expression of CFEMs with ZmWAK17ET or ZmLRR5 suppresses the ZmWAK17-triggered cell death. Our results show that ZmWAK17 mediates stalk rot resistance and that F. graminearum delivers apoplastic CFEMs to compromise ZmWAK17-mediated resistance.


Assuntos
Gibberella , Zea mays , Zea mays/genética , Zea mays/metabolismo , Gibberella/metabolismo , Doenças das Plantas/microbiologia , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo
17.
Acta Biochim Biophys Sin (Shanghai) ; 42(6): 410-7, 2010 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-20539941

RESUMO

A new bacterial secondary messenger, bis-(3',5')-cyclic dimeric guanosine monophosphate (c-di-GMP), is usually synthesized or decomposed by proteins containing GGDEF or glutamate-alanine-leucine (EAL) domain. They often act as cyclase or phosphodiesterase of c-di-GMP and their genes are distributed among almost all bacteria according to known genomic DNA sequences. However, the systematic identification of GGDEF and EAL genes remains unclear in rhizobia, soil bacteria that interact with compatible legumes to form nitrogen-fixing nodules. In this study, 19 putative GGDEF and EAL genes were identified in a model rhizobium, Sinorhizobium meliloti, by bioinformatic analysis (encoding 5 GGDEF proteins, 4 EAL proteins, and 10 GGDEF and EAL double-domain proteins). Null mutants of 14 genes were constructed through systematic plasmid insertion. All 14 gene mutants showed deficient growth in minimal medium and defective motility, and 11 gene mutants produced a lot more exopolysaccharide and displayed less competitive nodulation on the host plant, alfalfa. Our results suggested that GGDEF and EAL proteins may play different roles in the control of S. meliloti physiology, although they contain conserved catalytic (GGDEF or EAL) domains. Our finding also implied that c-di-GMP may play an important role in the interactions between this rhizobium and its host plants to establish efficient symbiosis.


Assuntos
Proteínas de Bactérias/fisiologia , GMP Cíclico/análogos & derivados , Medicago sativa/microbiologia , Polissacarídeos Bacterianos/biossíntese , Sinorhizobium meliloti/fisiologia , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , GMP Cíclico/metabolismo , Regulação Bacteriana da Expressão Gênica , Medicago sativa/genética , Medicago sativa/metabolismo , Nodulação/genética , Estrutura Terciária de Proteína/genética , Sistemas do Segundo Mensageiro/genética , Sinorhizobium meliloti/genética , Sinorhizobium meliloti/crescimento & desenvolvimento
18.
J Integr Plant Biol ; 52(7): 639-52, 2010 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-20590994

RESUMO

ROPs (Rho-related GTPases of plants) are small GTPases that are plant-specific signaling proteins. They act as molecular switches in a variety of developmental processes. In this study, seven cDNA clones coding for ROP GTPases have been isolated in Medicago truncatula, and conserved and divergent domains are identified in these predicted MtROP proteins. Phylogenetic analysis has indicated that MtROPs are distributed into groups II, III, IV but group I. MtROP genes are expressed in various tissues at different levels. A quantitative reverse transcription PCR analysis indicated that these MtROP genes have different expression profiles in the roots in response to infection with rhizobia. The expression of MtROP3, MtROP5 and MtROP6 are increased, as the expression of Nod factor or rhizobial-induced marker genes--NFP, Rip1 and Enod11; MtROP10 has showed enhanced expression at a certain post-inoculation time point. No significant changes in MtROP7 and MtROP9 expression have been detected and MtROP8 expression is dramatically decreased by about 80%-90%. Additionally, ROP promoter-GUS analysis has showed that MtROP3, MtROP5 and MtROP6 have elevated expression in transgenic root hairs after rhizobial inoculation. These results might suggest a role for some ROP GTPases in the regulation of early stages during rhizobial infection in symbiosis.


Assuntos
Proteínas de Ligação ao GTP/fisiologia , Regulação da Expressão Gênica de Plantas , Medicago truncatula/genética , Medicago truncatula/microbiologia , Proteínas de Plantas/fisiologia , Simbiose/fisiologia , Sequência de Aminoácidos , Proteínas de Ligação ao GTP/química , Proteínas de Ligação ao GTP/genética , Regulação da Expressão Gênica de Plantas/genética , Regulação da Expressão Gênica de Plantas/fisiologia , Dados de Sequência Molecular , Proteínas de Plantas/química , Proteínas de Plantas/genética , Raízes de Plantas/genética , Raízes de Plantas/microbiologia , Plantas Geneticamente Modificadas/genética , Plantas Geneticamente Modificadas/microbiologia , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Rhizobium/genética , Homologia de Sequência de Aminoácidos , Sinorhizobium meliloti/crescimento & desenvolvimento , Sinorhizobium meliloti/fisiologia , Simbiose/genética
19.
Adv Cogn Psychol ; 16(1): 1-12, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32537039

RESUMO

Using evoked response potentials, we investigated the implicit detection of incongruity during target-source matching in pictorial metaphors of Chinese advertising. Participants saw an image of a product (the target in a visual metaphorical relationship), and then made a same-different judgment in response to a second image (the source in a visual metaphorical relationship) which was (in)congruous to the first image in terms of shape and/or function. We collected behavioral (button-press reaction time and accuracy), and neural (N270, delta and theta band activity) measures. The time-frequency analysis showed faster processing of incongruous visual information. Moreover, shape and conceptual incongruity were associated with increased N270 amplitude as well as delta (1-3 Hz) and theta (4-8 Hz) band power. Noticeably, compared with conceptual incongruity, shape incongruity evoked a larger N270 amplitude and stronger delta and theta band oscillation. In addition, the average topographical analysis revealed a frontal and central distribution of the power activity. The analysis of attitudes towards the advertising metaphor pictures also proved the supportive role played by incongruity. In conclusion, incongruity facilitates target-source matching in pictorial metaphors of Chinese advertising. The findings obtained from the study are important to metaphor designs of advertising pictures.

20.
Genomics ; 92(2): 115-21, 2008 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-18550327

RESUMO

In nonplant species, many heat-shock transcription factors (HSFs) undergo spatiotemporal-specific alternative splicing. However, little is known about the spatiotemporal-specific splicing of HSFs in plants. Previously, we reported that the alfalfa HSF gene MsHSF1 undergoes multiple alternative splicing events in various tissues. Here, we identified another spliced transcript isoform, MsHSF1c, containing a 177-base tandem repeat, and showed that the low-abundance MsHSF1c is a nodule-specific transcript of MsHSF1. We also found that MsHSF1 presents multiple alleles with single-base variations and the expression of MsHSF1 alleles has allele-specific differences in alfalfa nodules. Because single-base variations at position 1006 change the AT of MsHSF1b to GT in MsHSF1b-3, creating a pair of donor/acceptor sites with the AG of MsHSF1b/1b-1 at position 827-828 for pre-mRNA splicing, we suggest that MsHSF1c may be generated by trans-splicing between alleles MsHSF1b-3 and MsHSF1b or MsHSF1b-1. These results provide new insight into the role of tissue-specific contribution in the transcription of plant HSF genes.


Assuntos
Proteínas de Ligação a DNA/genética , Regulação da Expressão Gênica de Plantas , Proteínas de Choque Térmico/genética , Medicago sativa/genética , Proteínas de Plantas/genética , Trans-Splicing , Fatores de Transcrição/genética , Transcrição Gênica , Alelos , Sequência de Aminoácidos , Sequência de Bases , Variação Genética , Fatores de Transcrição de Choque Térmico , Dados de Sequência Molecular , Isoformas de Proteínas/genética , Análise de Sequência de DNA , Sequências de Repetição em Tandem
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