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1.
Appl Environ Microbiol ; 90(7): e0101424, 2024 07 24.
Artigo em Inglês | MEDLINE | ID: mdl-38953370

RESUMO

Bacterial and fungal copper radical oxidases (CROs) from Auxiliary Activity Family 5 (AA5) are implicated in morphogenesis and pathogenesis. The unique catalytic properties of CROs also make these enzymes attractive biocatalysts for the transformation of small molecules and biopolymers. Despite a recent increase in the number of characterized AA5 members, especially from subfamily 2 (AA5_2), the catalytic diversity of the family as a whole remains underexplored. In the present study, phylogenetic analysis guided the selection of six AA5_2 members from diverse fungi for recombinant expression in Komagataella pfaffii (syn. Pichia pastoris) and biochemical characterization in vitro. Five of the targets displayed predominant galactose 6-oxidase activity (EC 1.1.3.9), and one was a broad-specificity aryl alcohol oxidase (EC 1.1.3.7) with maximum activity on the platform chemical 5-hydroxymethyl furfural (EC 1.1.3.47). Sequence alignment comparing previously characterized AA5_2 members to those from this study indicated various amino acid substitutions at active site positions implicated in the modulation of specificity.IMPORTANCEEnzyme discovery and characterization underpin advances in microbial biology and the application of biocatalysts in industrial processes. On one hand, oxidative processes are central to fungal saprotrophy and pathogenesis. On the other hand, controlled oxidation of small molecules and (bio)polymers valorizes these compounds and introduces versatile functional groups for further modification. The biochemical characterization of six new copper radical oxidases further illuminates the catalytic diversity of these enzymes, which will inform future biological studies and biotechnological applications.


Assuntos
Cobre , Oxirredutases , Filogenia , Oxirredutases/genética , Oxirredutases/metabolismo , Oxirredutases/química , Cobre/metabolismo , Saccharomycetales/genética , Saccharomycetales/enzimologia , Especificidade por Substrato , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/química , Oxirredutases do Álcool/genética , Oxirredutases do Álcool/metabolismo , Oxirredutases do Álcool/química , Galactose Oxidase/genética , Galactose Oxidase/metabolismo , Galactose Oxidase/química , Alinhamento de Sequência , Sequência de Aminoácidos , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Proteínas Recombinantes/química , Domínio Catalítico
2.
Biotechnol Bioeng ; 121(7): 2057-2066, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38650386

RESUMO

High hydrostatic pressure stabilized galactose oxidase (GaOx) at 70.0-80.0°C against thermal inactivation. The pseudo-first-order rate constant of inactivation kinact decreased by a factor of 8 at 80°C and by a factor of 44 at 72.5°C. The most pronounced effect of pressure was at the lowest studied temperature of 70.0°C with an activation volume of inactivation ΔV‡ of 78.8 cm3 mol-1. The optimal pressure against thermal inactivation was between 200 and 300 MPa. Unlike other enzymes, as temperature increased the ΔV‡ of inactivation decreased, and as pressure increased the activation energy of inactivation Eai increased. Combining the results for GaOx with earlier research on the pressure-induced stabilization of other enzymes suggests that ΔV‡ of inactivation correlates with the total molar volume of cavities larger than ~100 Å3 in enzyme monomers for enzymes near the optimal pH and whose thermal unfolding is not accompanied by oligomer dissociation.


Assuntos
Estabilidade Enzimática , Galactose Oxidase , Pressão Hidrostática , Galactose Oxidase/química , Galactose Oxidase/metabolismo , Temperatura Alta , Temperatura
3.
Biomacromolecules ; 25(7): 4428-4439, 2024 07 08.
Artigo em Inglês | MEDLINE | ID: mdl-38917058

RESUMO

Carbonyl cross-linkers are used to modify textiles and form resins, and are produced annually in megatonne volumes. Due to their toxicity toward the environment and human health, however, less harmful biobased alternatives are needed. This study introduces carbonyl groups to lactose and galactose using galactose oxidase from Fusarium graminearum (FgrGalOx) and pyranose dehydrogenase from Agaricus bisporus (AbPDH1) to produce four cross-linkers. Differential scanning calorimetry was used to compare cross-linker reactivity, most notably resulting in a 34 °C decrease in reaction peak temperature (72 °C) for FgrGalOx-oxidized galactose compared to unmodified galactose. Attenuated total reflectance Fourier-transform infrared (ATR-FTIR) spectroscopy, X-ray photoelectron spectroscopy (XPS), and proton nuclear magnetic resonance (1H NMR) spectroscopy were used to verify imine formation and amine and aldehyde depletion. Cross-linkers were shown to form gels when mixed with polyallylamine, with FgrGalOx-oxidized lactose forming gels more effectively than all other cross-linkers, including glutaraldehyde. Further development of carbohydrate cross-linker technologies could lead to their adoption in various applications, including in adhesives, resins, and textiles.


Assuntos
Reagentes de Ligações Cruzadas , Oxirredução , Poliaminas , Reagentes de Ligações Cruzadas/química , Poliaminas/química , Galactose Oxidase/química , Galactose Oxidase/metabolismo , Galactose/química , Lactose/química , Agaricus/química , Carboidratos/química
4.
Anal Bioanal Chem ; 416(16): 3811-3819, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38702448

RESUMO

Galactosemia, a severe genetic metabolic disorder, results from the absence of galactose-degrading enzymes, leading to harmful galactose accumulation. In this study, we introduce a novel capillary-based surface-enhanced Raman spectroscopy (SERS) sensor for convenient and sensitive galactose detection. The developed sensor enhances SERS signals by introducing gold nanoparticles (Au NPs) onto the surface of silver nanoshells (Ag NSs) within a capillary, creating Ag NSs with Au NPs as satellites. Utilizing 4-mercaptophenylboronic acid (4-MPBA) as a Raman reporter molecule, the detection method relies on the conversion of 4-MPBA to 4-mercaptophenol (4-MPhOH) driven by hydrogen peroxide (H2O2) generated during galactose oxidation by galactose oxidase (GOx). A new SERS signal was observed, which was generated by H2O2 produced when galactose and GOx reacted. Our strategy yielded a quantitative change in the SERS signal, specifically in the band intensity ratio of 998 to 1076 cm-1 (I998/I1076) as the galactose concentration increased. Our capillary-based SERS biosensor provides a promising platform for early galactosemia diagnosis.


Assuntos
Galactose , Ouro , Nanopartículas Metálicas , Prata , Análise Espectral Raman , Análise Espectral Raman/métodos , Galactose/química , Ouro/química , Nanopartículas Metálicas/química , Prata/química , Técnicas Biossensoriais/métodos , Humanos , Peróxido de Hidrogênio/química , Limite de Detecção , Galactosemias/diagnóstico , Galactosemias/sangue , Galactose Oxidase/química , Galactose Oxidase/metabolismo , Ácidos Borônicos/química , Compostos de Sulfidrila/química
5.
Angew Chem Int Ed Engl ; 63(31): e202407109, 2024 07 29.
Artigo em Inglês | MEDLINE | ID: mdl-38702296

RESUMO

Obtaining information about cellular interactions is fundamental to the elucidation of physiological and pathological processes. Proximity labeling technologies have been widely used to report cellular interactions in situ; however, the reliance on addition of tag molecules typically restricts their application to regions where tags can readily diffuse, while the application in, for example, solid tissues, is susceptible. Here, we propose an "in-situ-tag-generation mechanism" and develop the GalTag technology based on galactose oxidase (GAO) for recording cellular interactions within three-dimensional biological solid regions. GAO mounted on bait cells can in situ generate bio-orthogonal aldehyde tags as interaction reporters on prey cells. Using GalTag, we monitored the dynamics of cellular interactions and assessed the targeting ability of engineered cells. In particular, we recorded, for the first time, the footprints of Bacillus Calmette-Guérin (BCG) invasion into the bladder tissue of living mice, providing a valuable perspective to elucidate the anti-tumor mechanism of BCG.


Assuntos
Galactose Oxidase , Animais , Camundongos , Galactose Oxidase/metabolismo , Galactose Oxidase/química , Humanos , Comunicação Celular
6.
J Biol Chem ; 298(1): 101453, 2022 01.
Artigo em Inglês | MEDLINE | ID: mdl-34838818

RESUMO

In the preparation of commercial conjugate vaccines, capsular polysaccharides (CPSs) must undergo chemical modification to generate the reactive groups necessary for covalent attachment to a protein carrier. One of the most common approaches employed for this derivatization is sodium periodate (NaIO4) oxidation of vicinal diols found within CPS structures. This procedure is largely random and structurally damaging, potentially resulting in significant changes in the CPS structure and therefore its antigenicity. Additionally, periodate activation of CPS often gives rise to heterogeneous conjugate vaccine products with variable efficacy. Here, we explore the use of an alternative agent, galactose oxidase (GOase) isolated from Fusarium sp. in a chemoenzymatic approach to generate a conjugate vaccine against Streptococcus pneumoniae. Using a colorimetric assay and NMR spectroscopy, we found that GOase generated aldehyde motifs on the CPS of S. pneumoniae serotype 14 (Pn14p) in a site-specific and reversible fashion. Direct comparison of Pn14p derivatized by either GOase or NaIO4 illustrates the functionally deleterious role chemical oxidation can have on CPS structures. Immunization with the conjugate synthesized using GOase provided a markedly improved humoral response over the traditional periodate-oxidized group. Further, functional protection was validated in vitro by measure of opsonophagocytic killing and in vivo through a lethality challenge in mice. Overall, this work introduces a strategy for glycoconjugate development that overcomes limitations previously known to play a role in the current approach of vaccine design.


Assuntos
Galactose Oxidase , Vacinas Pneumocócicas , Polissacarídeos Bacterianos , Streptococcus pneumoniae , Animais , Anticorpos Antibacterianos/química , Anticorpos Antibacterianos/imunologia , Galactose Oxidase/química , Galactose Oxidase/imunologia , Galactose Oxidase/metabolismo , Glicoconjugados , Camundongos , Vacinas Pneumocócicas/química , Vacinas Pneumocócicas/imunologia , Polissacarídeos Bacterianos/química , Polissacarídeos Bacterianos/imunologia , Sorogrupo , Streptococcus pneumoniae/química , Streptococcus pneumoniae/imunologia , Vacinas Conjugadas
7.
Chemistry ; 29(23): e202300052, 2023 Apr 21.
Artigo em Inglês | MEDLINE | ID: mdl-36752160

RESUMO

Benzyl alcohol (BnOH) is a widely-used preservative in a variety of cosmetics, but the excess addition (≥1.0 %) may cause strong symptoms such as nausea, gastrointestinal irritation, convulsion, even death, making it crucial to monitor and control the addition quantity. Herein, we have developed a test-strip-like BnOH detection method via tailoring a galactose oxidase (GOase) towards BnOH oxidation and preparing a self-powered electrochromic strip for BnOH concentration visualization. A double-substituted GOase variant (Y329S/R330F), on the basis of the reported GOase M1 , has been obtained by semi-rational design with a 24.6-fold improved activity towards BnOH compared to GOase M1 . The GOase Y329S/R330F electrode has a response to BnOH with a linear range of 0.04 to 3.25 mM (R2 =0.9985), a sensitivity of 122.78 µA mM-1 cm-2 , and a detection limit of 0.03 mM (S/N=3). Coupling an electrochromic Prussian blue (PB) cathode helps the successful sensing visualization without any further power supply. The present sensing is more convenient and user-friendly than the generally used gas chromatography (GC) and high performance liquid chromatography (HPLC), and brings a more accessible solution to the field of quality controlling.


Assuntos
Álcool Benzílico , Galactose Oxidase , Galactose Oxidase/química , Oxirredução , Fontes de Energia Elétrica , Eletrodos
8.
J Am Chem Soc ; 142(44): 18753-18757, 2020 11 04.
Artigo em Inglês | MEDLINE | ID: mdl-33091303

RESUMO

Galactose oxidase (GAO) contains a Cu(II)-ligand radical cofactor. The cofactor, which is autocatalytically generated through the oxidation of the copper, consists of a cysteine-tyrosine radical (Cys-Tyr•) as a copper ligand. The formation of the cross-linked thioether bond is accompanied by a C-H bond scission on Tyr272 with few details known thus far. Here, we report the genetic incorporation of 3,5-dichlorotyrosine (Cl2-Tyr) and 3,5-difluorotyrosine (F2-Tyr) to replace Tyr272 in the GAOV previously optimized for expression through directed evolution. The proteins with an unnatural tyrosine residue are catalytically competent. We determined the high-resolution crystal structures of the GAOV, Cl2-Tyr272, and F2-Tyr272 incorporated variants at 1.48, 1.23, and 1.80 Šresolution, respectively. The structural data showed only one halogen remained in the cofactor, indicating that an oxidative carbon-chlorine/fluorine bond scission has occurred during the autocatalytic process of cofactor biogenesis. Using hydroxyurea as a radical scavenger, the spin-coupled hidden Cu(II) was observed by EPR spectroscopy. Thus, the structurally defined catalytic center with genetic unnatural tyrosine substitution is in the radical containing form as in the wild-type, i.e., Cu(II)-(Cl-Tyr•-Cys) or Cu(II)-(F-Tyr•-Cys). These findings illustrate a previously unobserved C-F/C-Cl bond cleavage in biology mediated by a mononuclear copper center.


Assuntos
Carbono/química , Cobre/química , Flúor/química , Radicais Livres/química , Galactose Oxidase/metabolismo , Tirosina/química , Catálise , Cristalografia por Raios X , Evolução Molecular Direcionada , Espectroscopia de Ressonância de Spin Eletrônica , Galactose Oxidase/química , Galactose Oxidase/genética , Cinética , Ligantes , Mutagênese Sítio-Dirigida , Oxirredução , Estrutura Terciária de Proteína , Tirosina/análogos & derivados , Tirosina/metabolismo
9.
Anal Chem ; 92(10): 7232-7239, 2020 05 19.
Artigo em Inglês | MEDLINE | ID: mdl-32297503

RESUMO

Lipid rafts, highly ordered cell membrane domains mainly composed of cholesterol, sphingolipids, and protein receptors, serve as important functional platforms for regulation of lipid/protein interactions. The major predicament in lipid raft study is the lack of direct and robust visualization tools for in situ tracking raft components. To solve this issue, we herein report a proximity enzymatic glyco-remodeling strategy for direct and highly efficient lipid raft labeling and imaging on live cells. Through cofunctionalization of raft-specific recognition motif and glycan-remodeling enzyme on gold nanoparticles, the fabricated nanoprobe can be specifically guided to the raft domains to perform catalytic remodeling on neighboring glycans. Taking advantage of the abundant glycoconjugates enriched in lipid rafts, this elaborate design achieves the translation of one raft-recognition event to multiple raft-confined labeling operations, thus, significantly increasing the labeling efficiency and imaging sensitivity. The direct covalent labeling also enables in situ and long-term tracking of raft components in live cells. The method possesses broad applicability and potential expansibility, thus, will greatly facilitate the investigations on the complex composition, organization, and dynamics of lipid rafts.


Assuntos
Toxina da Cólera/metabolismo , Galactose Oxidase/metabolismo , Lipídeos/análise , Polissacarídeos/metabolismo , Membrana Celular/química , Membrana Celular/metabolismo , Toxina da Cólera/química , Galactose Oxidase/química , Ouro/química , Ouro/metabolismo , Humanos , Nanopartículas Metálicas/química , Polissacarídeos/química , Células Tumorais Cultivadas
10.
Inorg Chem ; 59(22): 16567-16581, 2020 Nov 16.
Artigo em Inglês | MEDLINE | ID: mdl-33136386

RESUMO

Cu(I) active sites in metalloproteins are involved in O2 activation, but their O2 reactivity is difficult to study due to the Cu(I) d10 closed shell which precludes the use of conventional spectroscopic methods. Kß X-ray emission spectroscopy (XES) is a promising technique for investigating Cu(I) sites as it detects photons emitted by electronic transitions from occupied orbitals. Here, we demonstrate the utility of Kß XES in probing Cu(I) sites in model complexes and a metalloprotein. Using Cu(I)Cl, emission features from double-ionization (DI) states are identified using varying incident X-ray photon energies, and a reasonable method to correct the data to remove DI contributions is presented. Kß XES spectra of Cu(I) model complexes, having biologically relevant N/S ligands and different coordination numbers, are compared and analyzed, with the aid of density functional theory (DFT) calculations, to evaluate the sensitivity of the spectral features to the ligand environment. While the low-energy Kß2,5 emission feature reflects the ionization energy of ligand np valence orbitals, the high-energy Kß2,5 emission feature corresponds to transitions from molecular orbitals (MOs) having mainly Cu 3d character with the intensities determined by ligand-mediated d-p mixing. A Kß XES spectrum of the Cu(I) site in preprocessed galactose oxidase (GOpre) supports the 1Tyr/2His structural model that was determined by our previous X-ray absorption spectroscopy and DFT study. The high-energy Kß2,5 emission feature in the Cu(I)-GOpre data has information about the MO containing mostly Cu 3dx2-y2 character that is the frontier molecular orbital (FMO) for O2 activation, which shows the potential of Kß XES in probing the Cu(I) FMO associated with small-molecule activation in metalloproteins.


Assuntos
Cobre/metabolismo , Galactose Oxidase/metabolismo , Cobre/química , Teoria da Densidade Funcional , Galactose Oxidase/química , Oxigênio/química , Oxigênio/metabolismo , Espectrometria por Raios X
11.
Chemistry ; 25(32): 7649-7658, 2019 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-30912194

RESUMO

In order to gain new insights into the effect of the π-π stacking interaction of the indole ring with the CuII -phenoxyl radical as seen in the active form of galactose oxidase, we have prepared a CuII complex of a methoxy-substituted salen-type ligand, containing a pendent indole ring on the dinitrogen chelate backbone, and characterized its one-electron-oxidized forms. The X-ray crystal structures of the oxidized CuII complex exhibited the π-π stacking interaction of the indole ring mainly with one of the two phenolate moieties. The phenolate moiety in close contact with the indole moiety showed the characteristic phenoxyl radical structural features, indicating that the indole ring favors the π-π stacking interaction with the phenoxyl radical. The UV/Vis/NIR spectra of the oxidized CuII complex with the pendent indole ring was significantly different from those of the complex without the side-chain indole ring, and the absorption and CD spectra exhibited a solvent dependence, which is in line with the phenoxyl radical-indole stacking interaction in solution. The other physicochemical results and theoretical calculations strongly support that the indole ring, as an electron donor, stabilizes the phenoxyl radical by the π-π stacking interaction.


Assuntos
Complexos de Coordenação/química , Cobre/química , Etilenodiaminas/química , Galactose Oxidase/química , Indóis/química , Triptofano/química , Domínio Catalítico , Ligantes , Modelos Moleculares , Oxirredução , Conformação Proteica
12.
Chemistry ; 25(58): 13285-13289, 2019 Oct 17.
Artigo em Inglês | MEDLINE | ID: mdl-31441974

RESUMO

A calix[4]arene ligand, in which two of the phenol functions are replaced by pyrazole units has been employed to mimic the His2 -Tyr2 (His: histidine, Tyr: tyrosine) ligand sphere within the active site of the galactose oxidase (GO). The calixarene backbone forces the corresponding copper(II) complex into a see-saw-type structure, which is hitherto unprecedented in GO modelling chemistry. It undergoes a one-electron oxidation that is centered at the phenolate donor leading to a copper-coordinated phenoxyl radical like in the GO. Accordingly, the complex was tested as a functional model and indeed proved capable of oxidizing benzyl alcohol to the respective aldehyde using two phenoxyl-radical equivalents as oxidants. Finally, the results show that the calixarene platform can be utilized to arrange donor functions to biomimetic binding pockets that allow for the creation of novel types of model compounds.


Assuntos
Calixarenos/química , Galactose Oxidase/química , Oxigênio/química , Aldeídos/química , Sequência de Aminoácidos , Catálise , Domínio Catalítico , Complexos de Coordenação/química , Cobre/química , Técnicas Eletroquímicas/métodos , Ligantes , Modelos Moleculares , Estrutura Molecular , Níquel/química , Oxirredução , Fenóis/química , Ligação Proteica , Zinco/química
13.
Anal Chem ; 90(21): 12714-12722, 2018 11 06.
Artigo em Inglês | MEDLINE | ID: mdl-30350625

RESUMO

Human serum is a complex body fluid that contains various N-linked and O-linked glycoproteins. Compared with N-linked glycoproteins, the serum O-linked glycoproteins are not well-studied due to their high heterogeneity and their low abundance. Herein, we presented a novel chemoenzymatic method to analyze core-1 type of O-GalNAcylation in human serum. In this approach, the tryptic digest of serum was first subjected to PNGase F treatment to release the N-glycan and was then treated with strong acid to release sialic acid residues from mucin-type O-glycans. In this way, the internal Gal/GalNAc residues were exposed and were oxidized by the galactose oxidase to carry the aldehyde groups. The oxidized O-GalNAcylated peptides were then captured by hydrazide beads and eluted with methoxylamine for LC-MS/MS analysis. The de-N-deglycosylation decreased the abundance of N-glycopeptides, the desialylation simplified the O-glycans and the enzymatic oxidization conferred the enrichment specificity. We have demonstrated that this method was fitted to analyze O-GalNAcylated peptides with high confidence. This method was applied to analyze human serum, which resulted in the identification of 59 O-GalNAc modified peptide sequences corresponding to 38 glycoproteins from 50 µL of serum. This method is expected to have broad applications in the analysis of O-glycoproteome.


Assuntos
Proteínas Sanguíneas/análise , Glicoproteínas/análise , Proteômica/métodos , Proteínas Sanguíneas/química , Cromatografia Líquida , Galactose Oxidase/química , Glicopeptídeos/análise , Glicopeptídeos/química , Glicoproteínas/química , Glicosilação , Humanos , Hidrólise , Células Jurkat , Oxirredução , Peptídeo-N4-(N-acetil-beta-glucosaminil) Asparagina Amidase/química , Proteólise , Espectrometria de Massas em Tandem , Tripsina/química
14.
J Biol Inorg Chem ; 23(1): 51-59, 2018 01.
Artigo em Inglês | MEDLINE | ID: mdl-29218633

RESUMO

To gain insights into the role of the proximal indole ring in the redox-active metal center as seen in galactose oxidase, we prepared the Cu(II)-salen-type complexes having a pendent indol-3-ylmethyl (1), methyl (2) or benzyl (3) group substituted on the ethylenediamine moiety and investigated the structures and redox properties by various physicochemical methods and theoretical calculations. Neutral complexes 1, 2, and 3 showed no significant difference in the UV-Vis-NIR and EPR spectra. One-electron oxidation of 1, 2, and 3 by addition of 1 equiv. of thianthrenyl radical gave [1]SbCl 6 , [2]SbCl 6 , and [3]SbCl 6 , respectively, which could be assigned to relatively localized phenoxyl radical species. The cyclic and differential pulse voltammograms of [1]SbCl 6 showed two redox waves with a large separation between the first and second redox potentials compared with the separations observed for [2]SbCl 6 and [3]SbCl 6 . This suggests that [1]SbCl 6 is more stabilized than [2]SbCl 6 and [3]SbCl 6 . The NIR band of [1]SbCl 6 showed a larger blue shift than that of [2]SbCl 6 and [3]SbCl 6 . The EPR spectrum of [2]SbCl 6 exhibited an intense signal at the g value of 2 due to partial disproportionation to form the EPR active two-electron oxidized complex [2] 2+ , while the EPR intensity of [1]SbCl 6 was much weaker than that of [2]SbCl 6 . These results indicate that the pendent indole moiety stabilizes the Cu(II)-phenoxyl radical in [1]SbCl 6 most probably by stacking with the phenoxyl moiety, which is further supported by DFT calculations.


Assuntos
Complexos de Coordenação/química , Cobre/química , Etilenodiaminas/química , Radicais Livres/química , Indóis/química , Fenóis/química , Materiais Biomiméticos/síntese química , Materiais Biomiméticos/química , Complexos de Coordenação/síntese química , Etilenodiaminas/síntese química , Radicais Livres/síntese química , Galactose Oxidase/química , Indóis/síntese química , Modelos Químicos , Oxirredução , Fenóis/síntese química , Teoria Quântica
15.
Biochem J ; 474(5): 809-825, 2017 02 20.
Artigo em Inglês | MEDLINE | ID: mdl-28093470

RESUMO

GlxA from Streptomyces lividans is a mononuclear copper-radical oxidase and a member of the auxiliary activity family 5 (AA5). Its domain organisation and low sequence homology make it a distinct member of the AA5 family in which the fungal galactose 6-oxidase (Gox) is the best characterised. GlxA is a key cuproenzyme in the copper-dependent morphological development of S. lividans with a function that is linked to the processing of an extracytoplasmic glycan. The catalytic sites in GlxA and Gox contain two distinct one-electron acceptors comprising the copper ion and a 3'-(S-cysteinyl) tyrosine. The latter is formed post-translationally through a covalent bond between a cysteine and a copper-co-ordinating tyrosine ligand and houses a radical. In GlxA and Gox, a second co-ordination sphere tryptophan residue (Trp288 in GlxA) is present, but the orientation of the indole ring differs between the two enzymes, creating a marked difference in the π-π stacking interaction of the benzyl ring with the 3'-(S-cysteinyl) tyrosine. Differences in the spectroscopic and enzymatic activity have been reported between GlxA and Gox with the indole orientation suggested as a reason. Here, we report a series of in vivo and in vitro studies using the W288F and W288A variants of GlxA to assess the role of Trp288 on the morphology, maturation, spectroscopic and enzymatic properties. Our findings point towards a salient role for Trp288 in the kinetics of copper loading and maturation of GlxA, with its presence essential for stabilising the metalloradical site required for coupling catalytic activity and morphological development.


Assuntos
Proteínas de Bactérias/química , Cobre/química , Galactose Oxidase/química , Oxirredutases/química , Streptomyces lividans/química , Triptofano/química , Motivos de Aminoácidos , Substituição de Aminoácidos , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sítios de Ligação , Domínio Catalítico , Cátions Bivalentes , Clonagem Molecular , Cobre/metabolismo , Cristalografia por Raios X , Cisteína/química , Cisteína/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Fusarium/química , Fusarium/enzimologia , Fusarium/crescimento & desenvolvimento , Galactose Oxidase/genética , Galactose Oxidase/metabolismo , Expressão Gênica , Cinética , Ligantes , Mutação , Oxirredutases/genética , Oxirredutases/metabolismo , Ligação Proteica , Domínios Proteicos , Estrutura Secundária de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Streptomyces lividans/enzimologia , Streptomyces lividans/crescimento & desenvolvimento , Homologia Estrutural de Proteína , Especificidade por Substrato , Triptofano/metabolismo , Tirosina/química , Tirosina/metabolismo
16.
Angew Chem Int Ed Engl ; 57(43): 14240-14244, 2018 10 22.
Artigo em Inglês | MEDLINE | ID: mdl-30176101

RESUMO

We report an unprecedented catalytically promiscuous activity of the copper-dependent enzyme galactose oxidase. The enzyme catalyses the one-pot conversion of alcohols into the related nitriles under mild reaction conditions in ammonium buffer, consuming ammonia as the source of nitrogen and dioxygen (from air at atmospheric pressure) as the only oxidant. Thus, this green method does not require either cyanide salts, toxic metals, or undesired oxidants in stoichiometric amounts. The substrate scope of the reaction includes benzyl and cinnamyl alcohols as well as 4- and 3-pyridylmethanol, giving access to valuable chemical compounds. The oxidation proceeds through oxidation from alcohol to aldehyde, in situ imine formation, and final direct oxidation to nitrile.


Assuntos
Ar , Álcoois/química , Amônia/química , Galactose Oxidase/química , Nitrilas/síntese química , Aldeídos/química , Catálise , Oxirredução
17.
Biochim Biophys Acta ; 1860(2): 354-62, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26518347

RESUMO

BACKGROUND: Galactose oxidase (GaO) selectively oxidizes the primary hydroxyl of galactose to a carbonyl, facilitating targeted chemical derivatization of galactose-containing polysaccharides, leading to renewable polymers with tailored physical and chemical properties. Here we investigate the impact of a family 29 glucomannan binding module on the activity and binding of GaO towards various polysaccharides. Specifically, CBM29-1-2 from Piromyces equi was separately linked to the N- and C-termini of GaO. RESULTS: Both GaO-CBM29 and CBM29-GaO were successfully expressed in Pichia pastoris, and demonstrated enhanced binding to galactomannan, galactoglucomannan and galactoxyloglucan. The position of the CBM29 fusion affected the enzyme function. Particularly, C-terminal fusion led to greatest increases in galactomannan binding and catalytic efficiency, where relative to wild-type GaO, kcat/Km values increased by 7.5 and 19.8 times on guar galactomannan and locust bean galactomannan, respectively. The fusion of CBM29 also induced oligomerization of GaO-CBM29. MAJOR CONCLUSIONS: Similar to impacts of cellulose-binding modules associated with cellulolytic enzymes, increased substrate binding impeded the action of GaO fusions on more concentrated preparations of galactomannan, galactoglucomannan and galactoxyloglucan; this was especially true for GaO-CBM29. Given the N-terminal positioning of the native galactose-binding CBM32 in GaO, the varying impacts of N-terminal versus C-terminal fusion of CBM29-1-2 may reflect competing action of neighboring CBMs. GENERAL SIGNIFICANCE: This study thoroughly examines and discusses the effects of CBM fusion to non-lignocellulytic enzymes on soluble polysaccharides. Herein kinetics of GaO on galactose containing polysaccharides is presented for the first time.


Assuntos
Fusarium/enzimologia , Galactose Oxidase/metabolismo , Mananas/química , Sequência de Aminoácidos , Estabilidade Enzimática , Galactose/química , Galactose Oxidase/química , Dados de Sequência Molecular
18.
Angew Chem Int Ed Engl ; 56(23): 6502-6506, 2017 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-28464409

RESUMO

The concerted redox action of a metal ion and an organic cofactor is a unique way to maximize the catalytic power of an enzyme. An example of such synergy is the fungal galactose 6-oxidase, which has inspired the creation of biomimetic copper oxidation catalysts. Galactose 6-oxidase and its bacterial homologue, GlxA, possess a metalloradical catalytic site that contains a free radical on a covalently linked Cys-Tyr and a copper atom. Such a catalytic site enables for the two-electron oxidation of alcohols to aldehydes. When the ability to form the Cys-Tyr in GlxA is disrupted, a radical can still be formed. Surprisingly, the radical species is not the Tyr residue but rather a copper second-coordination sphere Trp residue. This is demonstrated through the introduction of a new algorithm for Trp-radical EPR spectra simulation. Our findings suggest a new mechanism of free-radical transfer between aromatic residues and that the Cys-Tyr cross-link prevents radical migration away from the catalytic site.


Assuntos
Cobre/química , Cisteína/química , Galactose Oxidase/química , Galactose Oxidase/metabolismo , Triptofano/química , Tirosina/química , Algoritmos , Domínio Catalítico , Cristalografia por Raios X , Espectroscopia de Ressonância de Spin Eletrônica , Oxirredução
19.
Angew Chem Int Ed Engl ; 56(28): 8139-8143, 2017 07 03.
Artigo em Inglês | MEDLINE | ID: mdl-28557363

RESUMO

Live cell imaging of protein-specific glycoforms is important for the elucidation of glycosylation mechanisms and identification of disease states. The currently used metabolic oligosaccharide engineering (MOE) technology permits routinely global chemical remodeling (GCM) for carbohydrate site of interest, but can exert unnecessary whole-cell scale perturbation and generate unpredictable metabolic efficiency issue. A localized chemical remodeling (LCM) strategy for efficient and reliable access to protein-specific glycoform information is reported. The proof-of-concept protocol developed for MUC1-specific terminal galactose/N-acetylgalactosamine (Gal/GalNAc) combines affinity binding, off-on switchable catalytic activity, and proximity catalysis to create a reactive handle for bioorthogonal labeling and imaging. Noteworthy assay features associated with LCM as compared with MOE include minimum target cell perturbation, short reaction timeframe, effectiveness as a molecular ruler, and quantitative analysis capability.


Assuntos
Rastreamento de Células , Oligossacarídeos/química , Proteínas/química , Acetilgalactosamina/química , Catálise , Eletroforese em Gel de Poliacrilamida , Galactose/química , Galactose Oxidase/química , Glicosilação , Humanos , Células MCF-7 , Mucina-1/química , Estudo de Prova de Conceito
20.
J Am Chem Soc ; 138(40): 13219-13229, 2016 10 12.
Artigo em Inglês | MEDLINE | ID: mdl-27626829

RESUMO

Galactose oxidase (GO) is a copper-dependent enzyme that accomplishes 2e- substrate oxidation by pairing a single copper with an unusual cysteinylated tyrosine (Cys-Tyr) redox cofactor. Previous studies have demonstrated that the post-translational biogenesis of Cys-Tyr is copper- and O2-dependent, resulting in a self-processing enzyme system. To investigate the mechanism of cofactor biogenesis in GO, the active-site structure of Cu(I)-loaded GO was determined using X-ray absorption near edge structure (XANES) and extended X-ray absorption fine structure (EXAFS) spectroscopy, and density-functional theory (DFT) calculations were performed on this model. Our results show that the active-site tyrosine lowers the Cu potential to enable the thermodynamically unfavorable 1e- reduction of O2, and the resulting Cu(II)-O2•- is activated toward H atom abstraction from cysteine. The final step of biogenesis is a concerted reaction involving coordinated Tyr ring deprotonation where Cu(II) coordination enables formation of the Cys-Tyr cross-link. These spectroscopic and computational results highlight the role of the Cu(I) in enabling O2 activation by 1e- and the role of the resulting Cu(II) in enabling substrate activation for biogenesis.


Assuntos
Domínio Catalítico , Coenzimas/biossíntese , Cobre/metabolismo , Galactose Oxidase/química , Galactose Oxidase/metabolismo , Oxigênio/metabolismo , Transporte de Elétrons , Ligantes , Modelos Moleculares , Teoria Quântica
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