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1.
Emerg Infect Dis ; 26(6): 1164-1173, 2020 06.
Artigo em Inglês | MEDLINE | ID: mdl-32441616

RESUMO

Salmonella enterica serovar Paratyphi B variant Java sequence type 28 is prevalent in poultry and poultry meat. We investigated the evolutionary relatedness between sequence type 28 strains from Europe and Latin America using time-resolved phylogeny and principal component analysis. We sequenced isolates from Colombia, Guatemala, Costa Rica, and the Netherlands and complemented them with publicly available genomes from Europe, Africa, and the Middle East. Phylogenetic time trees and effective population sizes (Ne) showed separate clustering of strains from Latin America and Europe. The separation is estimated to have occurred during the 1980s. Ne of strains increased sharply in Europe around 1995 and in Latin America around 2005. Principal component analysis on noncore genes showed a clear distinction between strains from Europe and Latin America, whereas the plasmid gene content was similar. Regardless of the evolutionary separation, similar features of resistance to ß-lactams and quinolones/fluoroquinolones indicated parallel evolution of antimicrobial resistance in both regions.


Assuntos
Salmonella enterica , Salmonella paratyphi B , África , Animais , Antibacterianos/farmacologia , Colômbia , Costa Rica , Farmacorresistência Bacteriana , Farmacorresistência Bacteriana Múltipla , Europa (Continente)/epidemiologia , Guatemala , Indonésia , América Latina/epidemiologia , Oriente Médio , Países Baixos , Filogenia , Aves Domésticas , Salmonella enterica/genética , Salmonella paratyphi B/genética
2.
J Antimicrob Chemother ; 72(12): 3317-3324, 2017 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-28962028

RESUMO

OBJECTIVES: Plasmid-mediated mobilized colistin resistance is currently known to be caused by phosphoethanolamine transferases termed MCR-1, MCR-2, MCR-3 and MCR-4. However, this study focuses on the dissection of a novel resistance mechanism in mcr-1-, mcr-2- and mcr-3-negative d-tartrate fermenting Salmonella enterica subsp. enterica serovar Paratyphi B (Salmonella Paratyphi B dTa+) isolates with colistin MIC values >2 mg/L. METHODS: A selected isolate from the strain collection of the German National Reference Laboratory for Salmonella was investigated by WGS and bioinformatical analysis to identify novel phosphoethanolamine transferase genes involved in colistin resistance. Subsequently PCR screening, S1-PFGE and DNA-DNA hybridization were performed to analyse the prevalence and location of the identified mcr-5 gene. Cloning and transformation experiments in Escherichia coli DH5α and Salmonella Paratyphi B dTa+ control strains were carried out and the activity of MCR-5 was determined in vitro by MIC testing. RESULTS: In this study, we identified a novel phosphoethanolamine transferase in 14 mcr-1-, mcr-2- and mcr-3-negative Salmonella Paratyphi B dTa+ isolates with colistin MIC values >2 mg/L that were received during 2011-13. The respective gene, further termed as mcr-5 (1644 bp), is part of a 7337 bp transposon of the Tn3 family and usually located on related multi-copy ColE-type plasmids. Interestingly, in one isolate an additional subclone with a chromosomal location of the mcr-5 transposon was observed. CONCLUSIONS: Our findings suggest that the transfer of colistin-resistance-mediating phosphoethanolamine transferase genes from bacterial chromosomes to mobile genetic elements has occurred in multiple independent events raising concern regarding their variety, prevalence and impact on public health.


Assuntos
Antibacterianos/farmacologia , Colistina/farmacologia , Elementos de DNA Transponíveis , Farmacorresistência Bacteriana , Etanolaminofosfotransferase/genética , Salmonella paratyphi B/efeitos dos fármacos , Salmonella paratyphi B/enzimologia , Clonagem Molecular , Eletroforese em Gel de Campo Pulsado , Escherichia coli/enzimologia , Escherichia coli/genética , Etanolaminofosfotransferase/metabolismo , Fermentação , Alemanha , Testes de Sensibilidade Microbiana , Hibridização de Ácido Nucleico , Reação em Cadeia da Polimerase , Salmonella paratyphi B/genética , Salmonella paratyphi B/metabolismo , Análise de Sequência de DNA , Tartaratos/metabolismo , Transformação Genética
3.
J Antimicrob Chemother ; 69(5): 1257-64, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24379303

RESUMO

OBJECTIVES: To characterize the genetic determinants responsible for extended-spectrum cephalosporin (ESC) resistance of d-tartrate-positive Salmonella enterica subsp. enterica serovar Paratyphi B (serovar Paratyphi B dT+) strains that have emerged in poultry and humans in Belgium during 2008-10. METHODS: The ESC resistance genes among non-redundant serovar Paratyphi B dT+ strains were determined using PCR and sequencing. ESC phenotypes were horizontally transferred by conjugation. Extended-spectrum ß-lactamase (ESBL)- or AmpC-carrying plasmids were typed by PCR-based replicon typing, plasmid multilocus sequence typing and restriction fragment length polymorphism. The genetic relationship of ESC-resistant strains was assessed by XbaI PFGE and multilocus sequence typing. RESULTS: Since 2008, the proportion of serovar Paratyphi B dT+ strains from broiler origin has increased significantly to reach 36.5% in 2010. Among 95 non-duplicate serovar Paratyphi B dT+ strains, 35% were resistant to ESCs. At the same time, a few ESC-resistant serovar Paratyphi B dT+ strains from humans were also detected in Belgium. The most prevalent ESBL gene, blaCTX-M-1, and the AmpC cephalosporinase gene blaCMY-2 were identified on various conjugative IncI1 plasmids of different sequence types and with different additional non-ß-lactam phenotypes. Interestingly, the blaCTX-M-2 gene was located on large multireplicon IncHI2/P plasmids. In addition, highly ESC-resistant strains contained both the ESBL CTX-M-2 and the AmpC CMY-2 encoded by the IncHI2/P and IncI1 plasmids, respectively. All ESC-resistant serovar Paratyphi B dT+ strains belonged to sequence type 28 and showed the common PFGE pattern X8, as well as the chromosomal class 2 integron cassette array dfrA1-sat2-aadA1 previously described in the European poultry-associated serovar Paratyphi B dT+ clonal population. CONCLUSIONS: This study showed that the clonal population of multidrug-resistant serovar Paratyphi B dT+, persisting in broilers in Belgium for the last decade, recently acquired various plasmid-borne ESC resistance determinants, constituting a major concern for public health. Further surveillance programmes and research are an absolute necessity to understand their epidemiology and to propose interventions to limit the spread of ESC- and multidrug-resistant Salmonella spp.


Assuntos
Febre Paratifoide/microbiologia , Febre Paratifoide/veterinária , Salmonella paratyphi B/enzimologia , Salmonella paratyphi B/isolamento & purificação , Tartaratos/metabolismo , beta-Lactamases/genética , Animais , Bélgica , Conjugação Genética , Eletroforese em Gel de Campo Pulsado , Transferência Genética Horizontal , Humanos , Reação em Cadeia da Polimerase , Aves Domésticas , Salmonella paratyphi B/genética , Salmonella paratyphi B/metabolismo , Análise de Sequência de DNA
5.
Microb Genom ; 9(2)2023 02.
Artigo em Inglês | MEDLINE | ID: mdl-36825878

RESUMO

Salmonella Paratyphi B infections in England are the least common imported typhoidal infection but can still cause invasive disease. Sentinel surveillance at the reference laboratory detected an outbreak from Iraq due to reported travel history, enabling enhanced PCR testing for a quick diagnosis.


Assuntos
Febre Paratifoide , Salmonella paratyphi B , Humanos , Salmonella paratyphi B/genética , Febre Paratifoide/epidemiologia , Vigilância de Evento Sentinela , Iraque , Eventos de Massa , Genômica , Surtos de Doenças
6.
Appl Environ Microbiol ; 78(20): 7347-57, 2012 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-22885742

RESUMO

In this study, the population structure, incidence, and potential sources of human infection caused by the d-tartrate-fermenting variant of Salmonella enterica serovar Paratyphi B [S. Paratyphi B (dT+)] was investigated. In Germany, the serovar is frequently isolated from broilers. Therefore, a selection of 108 epidemiologically unrelated S. enterica serovar Paratyphi B (dT+) strains isolated in Germany between 2002 and 2010 especially from humans, poultry/poultry meat, and reptiles was investigated by phenotypic and genotypic methods. Strains isolated from poultry and products thereof were strongly associated with multilocus sequence type ST28 and showed antimicrobial multiresistance profiles. Pulsed-field gel electrophoresis XbaI profiles were highly homogeneous, with only a few minor XbaI profile variants. All strains isolated from reptiles, except one, were strongly associated with ST88, another distantly related type. Most of the strains were susceptible to antimicrobial agents, and XbaI profiles were heterogeneous. Strains isolated from humans yielded seven sequence types (STs) clustering in three distantly related lineages. The first lineage, comprising five STs, represented mainly strains belonging to ST43 and ST149. The other two lineages were represented only by one ST each, ST28 and ST88. The relatedness of strains based on the pathogenicity gene repertoire (102 markers tested) was mostly in agreement with the multilocus sequence type. Because ST28 was frequently isolated from poultry but rarely in humans over the 9-year period investigated, overall, this study indicates that in Germany S. enterica serovar Paratyphi B (dT+) poses a health risk preferentially by contact with reptiles and, to a less extent, by exposure to poultry or poultry meat.


Assuntos
Febre Paratifoide/epidemiologia , Febre Paratifoide/microbiologia , Aves Domésticas/microbiologia , Répteis/microbiologia , Salmonella paratyphi B/classificação , Salmonella paratyphi B/isolamento & purificação , Tartaratos/metabolismo , Animais , Análise por Conglomerados , DNA Bacteriano/química , DNA Bacteriano/genética , Eletroforese em Gel de Campo Pulsado , Fermentação , Genótipo , Alemanha/epidemiologia , Humanos , Incidência , Epidemiologia Molecular , Dados de Sequência Molecular , Tipagem de Sequências Multilocus , Fenótipo , Salmonella paratyphi B/genética , Salmonella paratyphi B/metabolismo , Sorotipagem
7.
Malays J Pathol ; 34(1): 35-9, 2012 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-22870596

RESUMO

Serotyping is not sufficient to differentiate between Salmonella species that cause paratyphoid fever from the strains that cause milder gastroenteritis as these organisms share the same serotype Salmonella Paratyphi B (S. Paratyphi B). Strains causing paratyphoid fever do not ferment d-tartrate and this key feature was used in this study to determine the prevalence of these strains among the collection of S. Paratyphi B strains isolated from patients in Malaysia. A total of 105 isolates of S. Paratyphi B were discriminated into d-tartrate positive (dT+) and d-tartrate negative (dT) variants by two lead acetate test protocols and multiplex PCR. The lead acetate test protocol 1 differed from protocol 2 by a lower inoculum size and different incubation conditions while the multiplex PCR utilized 2 sets of primers targeting the ATG start codon of the gene STM3356. Lead acetate protocol 1 discriminated 97.1% of the isolates as S. Paratyphi B dT+ and 2.9% as dT while test protocol 2 discriminated all the isolates as S. Paratyphi B dT+. The multiplex PCR test identified all 105 isolates as S. Paratyphi B dT+ strains. The concordance of the lead acetate test relative to that of multiplex PCR was 97.7% and 100% for protocol 1 and 2 respectively. This study showed that S. Paratyphi B dT+ is a common causative agent of gastroenteritis in Malaysia while paratyphoid fever appears to be relatively uncommon. Multiplex PCR was shown to be a simpler, more rapid and reliable method to discriminate S. Paratyphi B than the phenotypic lead acetate test.


Assuntos
Febre Paratifoide/microbiologia , Salmonella paratyphi B/isolamento & purificação , Tartaratos/metabolismo , DNA Bacteriano/análise , Fezes/microbiologia , Fermentação , Genótipo , Humanos , Malásia , Compostos Organometálicos , Febre Paratifoide/diagnóstico , Fenótipo , Reação em Cadeia da Polimerase/métodos , Salmonella paratyphi B/classificação , Salmonella paratyphi B/genética , Salmonella paratyphi B/metabolismo , Sorotipagem
8.
Southeast Asian J Trop Med Public Health ; 42(5): 1178-89, 2011 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-22299444

RESUMO

Abstract. Salmonella enterica serovar Paratyphi B is known to cause either paratyphoid fever or gastroenteritis. Differentiation of Salmonella ser. Paratyphi B into biotype Java (d-tartrate fermenting, dT+) and biotype Paratyphi B (d-tartrate non-fermenting, dT) is important for Salmonella epidemiology. This study applied a PCR approach to differentiate the two biotypes to augment the conventional biochemical method and to determine the antibiograms and genomic diversity of Malaysian S. Paratyphi B. Among 100 strains tested (clinical, 86; non-humans, 14), only two clinical strains were confirmed as biotype Paratyphi B as indicated by both lead acetate test and PCR. Antibiotic resistance rates were as follows: streptomycin 18%, sulphonamides 13%, ampicillin 10%, chloramphenicol 4%, tetracycline 3%, cefotaxime 2%, cefpodoxime 2%, ceftazidime 2%, gentamicin 1% and trimethoprim 1%. None showed resistance towards amoxicillin-clavulanic acid, ceftiofur, ciprofloxacin, nalidixic acid and trimethoprim-sulphamethoxazole. Seven strains showed multidrug resistance towards 3 or more classes of antimicrobial agents. REP-PCR and PFGE generated 32 and 76 different profiles, respectively. PFGE (D = 0.99) was more discriminative than REP-PCR (D = 0.93) and antimicrobial susceptibility test (D = 0.48) in subtyping the strains. Strains isolated 18 years apart (1982 - 2008) from different localities in Malaysia were clonally related as demonstrated by REP-PCR and PFGE, indicating that these strains were stable and widely distributed. In some clusters, strains isolated from different sources (clinical, food and animal) were grouped together. Thus, biotype Java was the most common biotype of Salmonella ser. Paratyphi B in Malaysia. The PCR approach is highly recommended due to its simplicity, specificity and ease of operation. The level of antimicrobial resistance among Salmonella ser. Paratyphi B remained relatively low in Malaysia but the emergence of resistance to cephalosporins is a cause for concern.


Assuntos
Farmacorresistência Bacteriana Múltipla/genética , Variação Genética/genética , Febre Paratifoide/microbiologia , Salmonella paratyphi B/genética , Animais , Antibacterianos/farmacologia , Farmacorresistência Bacteriana Múltipla/efeitos dos fármacos , Eletroforese em Gel de Campo Pulsado , Fermentação , Microbiologia de Alimentos , Humanos , Malásia , Compostos Organometálicos/metabolismo , Febre Paratifoide/tratamento farmacológico , Febre Paratifoide/genética , Reação em Cadeia da Polimerase , Salmonella paratyphi B/classificação , Salmonella paratyphi B/efeitos dos fármacos , Tartaratos/metabolismo , Microbiologia da Água
9.
Pediatr Infect Dis J ; 40(10): e374-e378, 2021 10 01.
Artigo em Inglês | MEDLINE | ID: mdl-34321443

RESUMO

BACKGROUND: Salmonella Paratyphi B (Paratyphoid B) is a rare infection and a notifiable disease in England. Disease is typically mild, and chronic carriage in children has been described in endemic countries. Almost all cases in England are imported, with very few cases of community transmission reported. METHODS: The aim of this work was to describe an unusual cluster of Paratyphoid B cases transmitted within England, examining clinical, epidemiologic and microbiologic data. Detailed phylogenetic analysis is presented to corroborate public health epidemiologic links between cases. RESULTS: One child had recently returned from an endemic area and had mild gastrointestinal symptoms. One year later, 2 other children with no travel history developed invasive disease requiring hospitalization. Epidemiologic links confirmed person-to-person spread between these three cases. All isolates of S. Paratyphi B (n = 93) received by the Gastrointestinal Bacteria Reference Unit between 2014 and 2019 were typed using whole genome sequencing. Three cases of Paratyphoid B were identified in the same geographical location over a 2-year period. S. Paratyphi B strains isolated from the stool and blood of the three cases were closely linked (0-5 single-nucleotide polymorphisms) using whole genome sequencing. CONCLUSIONS: This case series highlights the potential public health risks of paratyphoid B and the range of pediatric complications associated with this illness, especially in younger children. Although rare, chronic carriage of Paratyphoid B can lead to transmission in nonendemic areas and should be considered in all children presenting with signs of enteric fever even where there is no history of foreign travel.


Assuntos
Portador Sadio/tratamento farmacológico , Portador Sadio/microbiologia , Febre Paratifoide/tratamento farmacológico , Saúde Pública/normas , Salmonella paratyphi B/genética , Pré-Escolar , Inglaterra/epidemiologia , Feminino , Humanos , Masculino , Febre Paratifoide/epidemiologia , Febre Paratifoide/microbiologia , Pais , Filogenia , Fatores de Risco , Salmonella paratyphi B/efeitos dos fármacos , Salmonella paratyphi B/fisiologia , Viagem , Sequenciamento Completo do Genoma
10.
FEMS Microbiol Lett ; 368(7)2021 04 25.
Artigo em Inglês | MEDLINE | ID: mdl-33830213

RESUMO

Salmonellosis is an important worldwide food-borne disease. Increasing resistance to Salmonella spp. has been reported in recent years, and now the prevalence of multidrug-resistant Salmonella spp. is a worldwide problem. This necessitates alternative approaches like phage therapy. This study aimed to isolate bacteriophages specific for Salmonella enterica serovar Paratyphi B and S. enterica serovar Typhimurium isolated from different sources (chicken meat, beef and eggshells). The antibiotic resistance profiles of the bacteria were determined by phenotypic and genotypic methods. The prevalence of extended-spectrum ß-lactamase genes was examined by polymerase chain reaction. In total, 75% of the isolated Salmonella strains were resistant to tetracycline, whereas 70% of them were resistant to azithromycin. All of the isolates from beef were resistant to nalidixic acid. The most common extended-spectrum ß-lactamase genes among the isolates were blaSHV (15%) followed by blaTEM (10%) and blaCTX (5%). Two specific bacteriophages were isolated and characterized. The host range for vB_SparS-ui was Salmonella Paratyphi B, S. enterica serovar Paratyphi A and S. enterica, while that for vB_StyS-sam phage was Salmonella Typhimurium and S. enterica serovar Enteritidis. The characteristics of the isolated phages indicate that they are proper candidates to be used to control some foodstuff contaminations and also phage therapy of infected animals.


Assuntos
Fagos de Salmonella/isolamento & purificação , Fagos de Salmonella/fisiologia , Salmonella paratyphi B/virologia , Salmonella typhimurium/virologia , Antibacterianos/farmacologia , Proteínas de Bactérias/genética , Farmacorresistência Bacteriana/genética , Genoma Viral/genética , Especificidade de Hospedeiro , Concentração de Íons de Hidrogênio , Fagos de Salmonella/ultraestrutura , Salmonella enterica/efeitos dos fármacos , Salmonella enterica/genética , Salmonella enterica/virologia , Salmonella paratyphi B/efeitos dos fármacos , Salmonella paratyphi B/genética , Salmonella typhimurium/efeitos dos fármacos , Salmonella typhimurium/genética , Sorogrupo , Cloreto de Sódio , Temperatura , Proteínas Virais/química , Proteínas Virais/genética
11.
Antimicrob Agents Chemother ; 53(6): 2319-26, 2009 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-19332668

RESUMO

The first Australian isolate of Salmonella enterica serovar Paratyphi B D-tartrate-utilizing (dT(+)) that is resistant to ampicillin, chloramphenicol, florfenicol, streptomycin, spectinomycin, sulfonamides, and tetracycline (ApCmFlSmSpSuTc) and contains SGI1 was isolated from a patient with gastroenteritis in early 1995. This is the earliest reported isolation globally. The incidence of infections caused by these SGI1-containing multiply antibiotic-resistant S. enterica serovar Paratyphi B dT(+) strains increased during the next few years and occurred sporadically in all states of Australia. Several molecular criteria were used to show that the early isolates are very closely related to one another and to strains isolated during the following few years and in 2000 and 2003 from home aquariums and their owners. Early isolates from travelers returning from Indonesia shared the same features. Thus, they appear to represent a true clone arising from a single cell that acquired SGI1. Some minor differences in the resistance profiles and molecular profiles also were observed, indicating the ongoing evolution of the clone, and phage type differences were common, indicating that this is not a useful epidemiological marker over time. Three isolates from 1995, 1998, and 1999 contained a complete sul1 gene but were susceptible to sulfamethoxazole due to a point mutation that creates a premature termination codon. This SGI1 type was designated SGI1-R. The loss of resistance genes also was examined. When strains were grown for many generations in the absence of antibiotic selection, the loss of SGI1 was not detected. However, variants SGI1-C (resistance profile SmSpSu) and SGI1-B (resistant to ApSu), which had lost part of the integron, arose spontaneously, presumably via homologous recombination between duplications in the In104 complex integron.


Assuntos
Farmacorresistência Bacteriana Múltipla , Ilhas Genômicas , Salmonella paratyphi B/efeitos dos fármacos , Salmonella paratyphi B/genética , Tartaratos/metabolismo , Elementos de DNA Transponíveis , Eletroforese em Gel de Campo Pulsado , Salmonella paratyphi B/metabolismo
12.
Foodborne Pathog Dis ; 6(4): 431-43, 2009 May.
Artigo em Inglês | MEDLINE | ID: mdl-19292689

RESUMO

A total of 36 contemporary human, animal, and environmental (+)-tartrate-fermenting (dT+) Salmonella enterica serovar Paratyphi B isolates, formerly called Salmonella serovar Java, and five related monophasic S. enterica serovar 4,5,12:b:- isolates from Belgium, Germany, the Netherlands, and the United Kingdom were investigated for clonality and antimicrobial resistance profiles, as well as their virulence and resistance gene repertoire. Two major clonal lines, which could be phenotypically differentiated by the expression of the O:5 antigen, were identified. All O:5 antigen negative strains were multidrug resistant and originated (with two exceptions) from Belgian, Dutch, or German poultry. Strains exhibiting the O:5 antigen encoded by the oafA gene revealed a more heterogeneous group including multidrug-resistant and susceptible strains. Compared to O:5 antigen negative isolates, Salmonella Paratyphi B dT+ O:5 positive strains possessed additional virulence determinants. The Salmonella genomic island 1 was only found in O:5 positive strains. Five monophasic Salmonella 4,5,12:b:- lacking the phase-2 flagellar antigen were assigned to Salmonella Paratyphi B dT+ isolates of the O:5 positive group. The conclusion of the analysis is that Salmonella Paratyphi B dT+ O:5 negative and O:5 positive isolates evolved from a different lineage. Salmonella Paratyphi B dT+ O:5 positive strains possess additional fimbrial and virulence genes that probably enable this clone to interact with a broader range of hosts and the environment. Salmonella Paratyphi B dT+ O:5 negative continuously persists in poultry across Western Europe, especially Belgium, the Netherlands, and Germany.


Assuntos
Antibacterianos/farmacologia , Farmacorresistência Bacteriana/genética , Febre Paratifoide/tratamento farmacológico , Febre Paratifoide/microbiologia , Salmonella paratyphi B , Animais , Técnicas de Tipagem Bacteriana , Bélgica , Contagem de Colônia Microbiana , Sondas de DNA , DNA Bacteriano/análise , Relação Dose-Resposta a Droga , Farmacorresistência Bacteriana Múltipla/genética , Variação Genética , Alemanha , Humanos , Testes de Sensibilidade Microbiana , Países Baixos , Análise de Sequência com Séries de Oligonucleotídeos , Salmonella paratyphi B/classificação , Salmonella paratyphi B/efeitos dos fármacos , Salmonella paratyphi B/genética , Salmonella paratyphi B/patogenicidade , Tartaratos/metabolismo , Reino Unido , Virulência/genética
13.
Epidemiol Mikrobiol Imunol ; 58(1): 25-30, 2009 Feb.
Artigo em Sk | MEDLINE | ID: mdl-19358450

RESUMO

OBJECTIVE: Salmonella Paratyphi B dT+ (or Salmonella Java) is an emerging public health problem. The study objective was to characterize phenotypically and genotypically 13 human isolates from sporadic cases of infection. MATERIAL AND METHODS: Phenotypic characteristics of 13 human isolates were determined by phage typing, disk diffusion method for testing antimicrobial susceptibility to 11 antibiotics and screening for selected virulence markers, i.e bacterial adherence to xylene, motility and biofilm formation. Genotypic characteristics of the study isolates were determined by PCR with primers for the detection of class 1 integrons, plasmid profile analysis and PFGE for the study of genetic diversity. RESULTS: The study isolates were classified into different phage types, with 3aI or 3aI variant being the most common (61.5%). All study isolates were resistant to streptomycin and sulfisoxazole, two of them were multiresistant (to streptomycin, sulfisoxazole, ampicillin and nalidixic acid). The study isolates showed low hydrophobicity, except for one isolate (2/08), and 5 isolates exhibited motility of > or = 50 mm. High biofilm formation was detected in 5 isolates. Class 1 integrons were not detected in any isolate and plasmid profile analysis revealed the presence of a 90-kb plasmid in 8 isolates. XbaI PFGE analysis differentiated the isolates into 6 pulsotypes (X1, X2, X2a, X3, X4,X5). CONCLUSION: Although the study set of S. Paratyphi B dT+ (S. Java) was small, the increasing emergence of this serovar in the human population in Slovakia is noteworthy. The results of gene analysis in PFGE suggest clonal diversity as well as a clonal link between strains of the predominant phage type. In view of possible increase in antimicrobial resistance and the spread of certain clones, continuous surveillance of strains of S. Paratyphi B dT+ is needed.


Assuntos
Salmonella paratyphi B/classificação , Tipagem de Bacteriófagos , Gastroenterite/microbiologia , Genótipo , Humanos , Testes de Sensibilidade Microbiana , Plasmídeos , Salmonella paratyphi B/genética , Salmonella paratyphi B/isolamento & purificação , Salmonella paratyphi B/fisiologia
14.
Int J Food Microbiol ; 290: 180-183, 2019 Feb 02.
Artigo em Inglês | MEDLINE | ID: mdl-30342248

RESUMO

Salmonella enterica serovar Paratyphi B (S. Paratyphi B) is a major foodborne pathogen distributed all over the world. However, little is known about the antibiotic resistance, genetic relatedness and virulence profile of S. Paratyphi B isolated from leafy vegetables and the processing environment in Malaysia. In this study, 6 S. Paratyphi B isolates were recovered from different vegetables and drain water of processing areas obtained from fresh food markets in Malaysia. The isolates were characterized by antibiogram, Pulsed-field gel electrophoresis (PFGE) and virulence genes. Antibiotic susceptibility test showed that 3 of the isolates were resistant to the antibiotics. These include S. Paratyphi B SP251 isolate, which was resistant to chloramphenicol, ampicillin, sulfonamides and streptomycin; Isolate SP246 which was resistant to chloramphenicol, sulfonamides and streptomycin and Isolate SP235 showing resistance to nalidixic acid only. PFGE subtyped the 6 S. Paratyphi B isolates into 6 distinct XbaI-pulsotypes, with a wide range of genetic similarity (0.55 to 0.9). The isolates from different sources and fresh food markets location were genetically diverse. Thirteen (tolC, orgA, spaN, prgH, sipB, invA, pefA, sofB, msgA, cdtB, pagC, spiA and spvB) out of the 17 virulence genes tested were found in all of the S. Paratyphi B isolates. Another gene (lpfC), was found only in one isolate (SP051). None of the isolates possessed sifA, sitC and ironN genes. In summary, this study provides unique information on antibiotic resistance, genetic relatedness, and virulotyping of S. Paratyphi B isolated from leafy vegetables and processing environment.


Assuntos
Variação Genética , Salmonella paratyphi B/efeitos dos fármacos , Salmonella paratyphi B/genética , Verduras/microbiologia , Antibacterianos/farmacologia , Farmacorresistência Bacteriana/genética , Eletroforese em Gel de Campo Pulsado , Indústria de Processamento de Alimentos , Genes Bacterianos/genética , Humanos , Malásia , Testes de Sensibilidade Microbiana , Tipagem Molecular , Salmonella enterica/isolamento & purificação , Salmonella paratyphi B/virologia , Virulência/genética
16.
mSphere ; 3(6)2018 11 28.
Artigo em Inglês | MEDLINE | ID: mdl-30487152

RESUMO

Enteric fever is caused by three Salmonella enterica serovars: Typhi, Paratyphi A, and Paratyphi B sensu stricto Although vaccines against two of these serovars are licensed (Typhi) or in clinical development (Paratyphi A), as yet there are no candidates for S. Paratyphi B. To gain genomic insight into these serovars, we sequenced 38 enteric fever-associated strains from Chile and compared these with reference genomes. Each of the serovars was separated genomically based on the core genome. Genomic comparisons identified loci that were aberrant between serovars Paratyphi B sensu stricto and Paratyphi B Java, which is typically associated with gastroenteritis; however, the majority of these were annotated as hypothetical or phage related and thus were not ideal vaccine candidates. With the genomic information in hand, we engineered a live attenuated S. Paratyphi B sensu stricto vaccine strain, CVD 2005, which was capable of protecting mice from both homologous challenge and heterologous challenge with S. Paratyphi B Java. These findings extend our understanding of S. Paratyphi B and provide a viable vaccine option for inclusion in a trivalent live attenuated enteric fever vaccine formulation.IMPORTANCE We developed a live attenuated Salmonella enterica serovar Paratyphi B vaccine that conferred protection in mice against challenge with S Paratyphi B sensu stricto and S Paratyphi B Java, which are the causes of enteric fever and gastroenteritis, respectively. Currently, the incidence of invasive S. Paratyphi B sensu stricto infections is low; however, the development of new conjugate vaccines against other enteric fever serovars could lead to the emergence of S. Paratyphi B to fill the niche left by these other pathogens. As such, an effective S. Paratyphi B vaccine would be a useful tool in the armamentarium against Salmonella infections. Comparative genomics confirmed the serovar-specific groupings of these isolates and revealed that there are a limited number of genetic differences between the sensu stricto and Java strains, which are mostly hypothetical and phage-encoded proteins. The observed level of genomic similarity likely explains why we observe some cross-protection.


Assuntos
Febre Paratifoide/prevenção & controle , Salmonella paratyphi B/imunologia , Vacinas Tíficas-Paratíficas/imunologia , Animais , Chile , Modelos Animais de Doenças , Camundongos , Salmonella paratyphi B/genética , Salmonella paratyphi B/patogenicidade , Análise de Sobrevida , Resultado do Tratamento , Vacinas Tíficas-Paratíficas/administração & dosagem , Vacinas Tíficas-Paratíficas/genética , Vacinas Tíficas-Paratíficas/isolamento & purificação , Vacinas Atenuadas/administração & dosagem , Vacinas Atenuadas/genética , Vacinas Atenuadas/imunologia , Vacinas Atenuadas/isolamento & purificação , Sequenciamento Completo do Genoma
18.
J Med Microbiol ; 55(Pt 12): 1661-1665, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-17108269

RESUMO

Salmonella enterica subspecies enterica serovar Paratyphi B [O1,4,(5),12 : Hb : 1,2] can cause either an enteric fever (paratyphoid fever) or self-limiting gastroenteritis in humans. The d-tartrate non-fermenting variant S. enterica subsp. enterica serovar Paratyphi B dT- (S. Paratyphi B) is the causative agent of paratyphoid fever, and the d-tartrate fermenting variant S. enterica subsp. enterica serovar Paratyphi B dT+ (S. Paratyphi B dT+; formerly called Salmonella Java) causes gastroenteritis. S. Java is currently recognized as an emerging problem worldwide. Twelve dT+ S. Java isolates were collected in Indonesia between 2000 and 2002. One-third of them contained Salmonella genomic island 1 (SGI1), which gives the multidrug-resistant phenotype to the bacteria. In this study, a PCR-based method to detect a single nucleotide difference responsible for the inability to ferment d-tartrate, reported elsewhere, was validated. The d-tartrate fermenting phenotype of S. Java was converted to the non-fermenting phenotype by the disruption of the ORF STM 3356, and the d-tartrate non-fermenting phenotype of the ORF STM 3356-disrupted strain and the dT- reference strain was changed to the dT+ phenotype by complementing ORF STM 3356 in trans. The results show that the dT+ phenotype requires a functional product encoded by STM 3356, and support the use of the PCR-based discrimination method for S. Paratyphi B and S. Java as the standard differentiation method.


Assuntos
Febre Paratifoide/microbiologia , Salmonella paratyphi B/metabolismo , Tartaratos/metabolismo , Antibacterianos/farmacologia , Resistência ao Cloranfenicol , Farmacorresistência Bacteriana Múltipla , Fermentação , Teste de Complementação Genética , Ilhas Genômicas/genética , Humanos , Indonésia , Fases de Leitura Aberta/genética , Febre Paratifoide/diagnóstico , Polimorfismo de Nucleotídeo Único , Salmonella paratyphi B/classificação , Salmonella paratyphi B/efeitos dos fármacos , Salmonella paratyphi B/genética , Estreptomicina/farmacologia
19.
J Food Prot ; 69(6): 1280-5, 2006 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-16786846

RESUMO

Salmonella serotype Paratyphi B isolates obtained from shellfish and human infections in Galicia (northwest Spain) from 1998 were investigated by different phenotypic and genetic methods to evaluate their systemic or enteric nature. Isolates were investigated for D-tartrate fermentation, presence of genes encoding the effector proteins sopE1 and avrA, pulsed-field gel electrophoresis profile, and antimicrobial susceptibility. Systemic variant strains (dT-) were the dominant among the marine environment isolates. All dT- isolates were sopE1 positive and avrA negative, presented an indistinguishable electrophoresis profile, and were grouped in a single cluster. More electrophoresis heterogeneity was observed among dT+ isolates. Only two isolates showed resistance to any of the 16 antibiotics included in our panel. The present study identified the marine environment as a potential natural source of systemic variant isolates of Salmonella Paratyphi B. The presence of systemic variant isolates of Salmonella Paratyphi B in the marine environment is of notable public health significance as a result of the potential risk of acquiring enteric fever linked to the consumption of raw shellfish.


Assuntos
Antibacterianos/farmacologia , Microbiologia Ambiental , Microbiologia de Alimentos , Febre Paratifoide/microbiologia , Saúde Pública , Salmonella paratyphi B/isolamento & purificação , Frutos do Mar/microbiologia , Animais , Análise por Conglomerados , Contagem de Colônia Microbiana , DNA Bacteriano/análise , Farmacorresistência Bacteriana , Eletroforese em Gel de Campo Pulsado/métodos , Fermentação , Contaminação de Alimentos , Genótipo , Humanos , Testes de Sensibilidade Microbiana , Fenótipo , Filogenia , Reação em Cadeia da Polimerase/métodos , Salmonella paratyphi B/classificação , Salmonella paratyphi B/genética , Espanha , Tartaratos/metabolismo
20.
Jpn J Infect Dis ; 59(2): 132-4, 2006 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-16632917

RESUMO

Our report highlights a case of severe childhood salmonellosis related to a pet turtle, a red-eared slider (Trachemys scripta elegans). A 6-year-old girl had gastroenteritis complicated with sepsis caused by serotype Paratyphi B, which shared the same pulsed-field gel electrophoresis profiles with the organism isolated from a pet turtle. Based on our literature survey on childhood invasive salmonellosis acquired from reptiles, this case is the first documented reptile-associated salmonellosis including sepsis caused by this serotype.


Assuntos
Gastroenterite/microbiologia , Febre Paratifoide/transmissão , Salmonella paratyphi B/isolamento & purificação , Tartarugas/microbiologia , Zoonoses , Animais , Criança , DNA Bacteriano/análise , DNA Bacteriano/química , Eletroforese em Gel de Campo Pulsado , Feminino , Gastroenterite/etiologia , Humanos , Febre Paratifoide/etiologia , Febre Paratifoide/microbiologia , Salmonella paratyphi B/genética
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