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Quantitative Trait Locus Analysis of SIX1-SIX6 With Retinal Nerve Fiber Layer Thickness in Individuals of European Descent.
Kuo, Jane Z; Zangwill, Linda M; Medeiros, Felipe A; Liebmann, Jeffery M; Girkin, Christopher A; Hammel, Na'ama; Rotter, Jerome I; Weinreb, Robert N.
Affiliation
  • Kuo JZ; Hamilton Glaucoma Center and Department of Ophthalmology, Shiley Eye Institute, University of California San Diego, La Jolla, California; Pathway Genomics Corporation, San Diego, California.
  • Zangwill LM; Hamilton Glaucoma Center and Department of Ophthalmology, Shiley Eye Institute, University of California San Diego, La Jolla, California.
  • Medeiros FA; Hamilton Glaucoma Center and Department of Ophthalmology, Shiley Eye Institute, University of California San Diego, La Jolla, California.
  • Liebmann JM; Harkness Eye Institute, Columbia University Medical Center, New York, New York.
  • Girkin CA; Department of Ophthalmology, University of Alabama, Callahan Eye Hospital, Birmingham, Alabama.
  • Hammel N; Hamilton Glaucoma Center and Department of Ophthalmology, Shiley Eye Institute, University of California San Diego, La Jolla, California.
  • Rotter JI; Institute for Translational Genomics and Population Sciences, Los Angeles BioMedical Research Institute at Harbor-University of California Los Angeles Medical Center, Torrance, California.
  • Weinreb RN; Hamilton Glaucoma Center and Department of Ophthalmology, Shiley Eye Institute, University of California San Diego, La Jolla, California. Electronic address: rweinreb@ucsd.edu.
Am J Ophthalmol ; 160(1): 123-30.e1, 2015 Jul.
Article in En | MEDLINE | ID: mdl-25849520
ABSTRACT

PURPOSE:

To perform a quantitative trait locus (QTL) analysis and evaluate whether a locus between SIX1 and SIX6 is associated with retinal nerve fiber layer (RNFL) thickness in individuals of European descent.

DESIGN:

Observational, multicenter, cross-sectional study.

METHODS:

A total of 231 participants were recruited from the Diagnostic Innovations in Glaucoma Study and the African Descent and Glaucoma Evaluation Study. Association of rs10483727 in SIX1-SIX6 with global and sectoral RNFL thickness was performed. Quantitative trait analysis with the additive model of inheritance was analyzed using linear regression. Trend analysis was performed to evaluate the mean global and sectoral RNFL thickness with 3 genotypes of interest (T/T, C/T, C/C). All models were adjusted for age and sex.

RESULTS:

Direction of association between T allele and RNFL thickness was consistent in the global and different sectoral RNFL regions. Each copy of the T risk allele in rs10483727 was associated with -0.16 µm thinner global RNFL thickness (ß = -0.16, 95% confidence interval -0.28 to -0.03; P = .01). Similar patterns were found for the sectoral regions, including inferior (P = .03), inferior-nasal (P = .017), superior-nasal (P = .0025), superior (P = .002) and superior-temporal (P = .008). The greatest differences were observed in the superior and inferior quadrants, supporting clinical observations for RNFL thinning in glaucoma. Thinner global RNFL was found in subjects with T/T genotypes compared to subjects with C/T and C/C genotypes (P = .044).

CONCLUSIONS:

Each copy of the T risk allele has an additive effect and was associated with thinner global and sectoral RNFL. Findings from this QTL analysis further support a genetic contribution to glaucoma pathophysiology.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Retinal Ganglion Cells / Glaucoma, Open-Angle / Homeodomain Proteins / Polymorphism, Single Nucleotide / Quantitative Trait Loci / Eye Proteins / Nerve Fibers Type of study: Clinical_trials / Diagnostic_studies / Observational_studies / Prevalence_studies / Prognostic_studies / Risk_factors_studies Limits: Aged / Female / Humans / Male / Middle aged Language: En Journal: Am J Ophthalmol Year: 2015 Type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Retinal Ganglion Cells / Glaucoma, Open-Angle / Homeodomain Proteins / Polymorphism, Single Nucleotide / Quantitative Trait Loci / Eye Proteins / Nerve Fibers Type of study: Clinical_trials / Diagnostic_studies / Observational_studies / Prevalence_studies / Prognostic_studies / Risk_factors_studies Limits: Aged / Female / Humans / Male / Middle aged Language: En Journal: Am J Ophthalmol Year: 2015 Type: Article