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Ketobacter alkanivorans gen. nov., sp. nov., an n-alkane-degrading bacterium isolated from seawater.
Kim, Seol-Hee; Kim, Jong-Geol; Jung, Man-Young; Kim, So-Jeong; Gwak, Joo-Han; Yu, Woon-Jong; Roh, Seong Woon; Kim, Yang-Hoon; Rhee, Sung-Keun.
Affiliation
  • Kim SH; Department of Microbiology, Chungbuk National University, Cheongju 28644, Republic of Korea.
  • Kim JG; Department of Microbiology, Chungbuk National University, Cheongju 28644, Republic of Korea.
  • Jung MY; Department of Microbial Ecology, University of Vienna, 1090 Vienna, Austria.
  • Kim SJ; Geologic Environment Research Division, Korea Institute of Geoscience and Mineral Resources, Daejeon 34132, Republic of Korea.
  • Gwak JH; Department of Microbiology, Chungbuk National University, Cheongju 28644, Republic of Korea.
  • Yu WJ; Department of Microbiology, Chungbuk National University, Cheongju 28644, Republic of Korea.
  • Roh SW; Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
  • Kim YH; Department of Microbiology, Chungbuk National University, Cheongju 28644, Republic of Korea.
  • Rhee SK; Department of Microbiology, Chungbuk National University, Cheongju 28644, Republic of Korea.
Int J Syst Evol Microbiol ; 68(7): 2258-2264, 2018 Jul.
Article in En | MEDLINE | ID: mdl-29809120
Strain GI5T was isolated from a surface seawater sample collected from Garorim Bay (West Sea, Republic of Korea). The isolated strain was aerobic, Gram-stain-negative, rod-shaped, motile by means of a polar flagellum, negative for catalase and weakly positive for oxidase. The optimum growth pH, salinity and temperature were determined to be pH 7.5-8.0, 3 % NaCl (w/v) and 25 °C, respectively; the growth ranges were pH 6.0-9.0, 1-7 % NaCl (w/v) and 18-40 °C. The results of phylogenetic analysis of 16S rRNA gene sequences indicated that GI5T clustered within the family Alcanivoracaceae, and most closely with Alcanivorax dieseloleiB-5T and Alcanivorax marinusR8-12T (91.9 % and 91.6 % similarity, respectively). The major cellular fatty acids in GI5T were C18 : 1ω7c/C18 : 1ω6c (44.45 %), C16 : 1ω6c/C16 : 1ω7c (14.17 %) and C16 : 0 (10.19 %); this profile was distinct from those of the closely related species. The major respiratory quinone of GI5T was Q-8. The main polar lipids were phosphatidylethanolamine and phosphatidylglycerol. Two putative alkane hydroxylase (alkB) genes were identified in GI5T. The G+C content of the genomic DNA of GI5T was determined to be 51.2 mol%. On the basis of the results of phenotypic, chemotaxonomic and phylogenetic studies, strain GI5T represents a novel species of a novel genus of the family Alcanivoracaceae, for which we propose the name Ketobacter alkanivorans gen. nov., sp. nov.; the type strain is GI5T (=KCTC 52659T=JCM 31835T).
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phylogeny / Seawater / Alkanes / Alcanivoraceae Country/Region as subject: Asia Language: En Journal: Int J Syst Evol Microbiol Journal subject: MICROBIOLOGIA Year: 2018 Type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phylogeny / Seawater / Alkanes / Alcanivoraceae Country/Region as subject: Asia Language: En Journal: Int J Syst Evol Microbiol Journal subject: MICROBIOLOGIA Year: 2018 Type: Article