microCLIP super learning framework uncovers functional transcriptome-wide miRNA interactions.

Paraskevopoulou, Maria D; Karagkouni, Dimitra; Vlachos, Ioannis S; Tastsoglou, Spyros; Hatzigeorgiou, Artemis G

Paraskevopoulou, Maria D; Karagkouni, Dimitra; Vlachos, Ioannis S; Tastsoglou, Spyros; Hatzigeorgiou, Artemis G.

Affiliation

Paraskevopoulou MD; DIANA-Lab, Department of Electrical & Computer Engineering, University of Thessaly, 38221, Volos, Greece. mparaskevopoulou@inf.uth.gr.
Karagkouni D; Molecular Oncology Research Institute, Tufts Medical Center, Boston, 02111, MA, USA. mparaskevopoulou@inf.uth.gr.
Vlachos IS; DIANA-Lab, Department of Electrical & Computer Engineering, University of Thessaly, 38221, Volos, Greece.
Tastsoglou S; DIANA-Lab, Department of Electrical & Computer Engineering, University of Thessaly, 38221, Volos, Greece.
Hatzigeorgiou AG; Department of Neurology, Brigham & Women's Hospital, Harvard Medical School, Boston, 02115, MA, USA.

Nat Commun ; 9(1): 3601, 2018 09 06.

Article in En | MEDLINE | ID: mdl-30190538

Subject(s)

High-Throughput Nucleotide Sequencing/methods; Immunoprecipitation/methods; MicroRNAs/genetics; Argonaute Proteins/chemistry; Binding Sites; Breast Neoplasms/genetics; Carcinoma, Ductal, Breast/genetics; Computer Simulation; Cross-Linking Reagents/chemistry; Female; Gene Expression Profiling/methods; Gene Library; Humans; MCF-7 Cells; MicroRNAs/metabolism; Reproducibility of Results; Sequence Analysis, RNA

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: MicroRNAs / Immunoprecipitation / High-Throughput Nucleotide Sequencing Type of study: Prognostic_studies Limits: Female / Humans Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2018 Type: Article Affiliation country: Greece

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