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Deep targeted sequencing reveals the diversity of TRB-CDR3 repertoire in patients with preeclampsia.
Guo, Changlong; Cai, Ruikun; Cao, Xiaofang; Yang, Ying; Wang, Qidi; He, Runsheng; An, Lisha; Peng, Zuoqi; Chen, Yequn; Ni, Shuhua; Tan, Xuerui; Han, Jian; Liu, Xin; Lin, Li; Yu, Song; Wang, Xingyu; Wang, Chunlin; Ma, Xu.
Affiliation
  • Guo C; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • Cai R; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • Cao X; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • Yang Y; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • Wang Q; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • He R; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • An L; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • Peng Z; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China.
  • Chen Y; The First Affiliated Hospital, Medical College of Shantou University, Shantou, Guangdong 515041, China.
  • Ni S; The First Affiliated Hospital, Medical College of Shantou University, Shantou, Guangdong 515041, China.
  • Tan X; The First Affiliated Hospital, Medical College of Shantou University, Shantou, Guangdong 515041, China.
  • Han J; HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
  • Liu X; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China; Laboratory of Human Genetics, Beijing Hypertension League Institute, Beijing 100043, China.
  • Lin L; Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
  • Yu S; Beijing Obstetrics and Gynecology Hospital, Capital Medical University, Beijing Maternal and Child Health Care Hospital, Beijing 100026, China.
  • Wang X; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China; Laboratory of Human Genetics, Beijing Hypertension League Institute, Beijing 100043, China. Electronic address: xingyuw@yahoo.com.
  • Wang C; Stanford Genome Technology Center, Stanford University, Palo Alto CA 94003, USA. Electronic address: chunlinw@outlook.com.
  • Ma X; Department of Genetics, National Research Institute for Family Planning, Beijing 100081, China; Graduate School of Peking Union Medical College, Beijing 100730, China. Electronic address: genetic88@126.com.
Hum Immunol ; 80(10): 848-854, 2019 Oct.
Article in En | MEDLINE | ID: mdl-30965079
ABSTRACT
Preeclampsia (PE) is one of the major causes of maternal and perinatal mortality worldwide. This study aimed to determine the immunological characteristics of PE patients and normal pregnancy at the T cell receptor beta-chain (TRB) level by using high-throughput sequencing. High-throughput sequencing was performed to analyze the expression of TRB-CDR3 in circulating T cells. T cells were isolated from 36 healthy pregnant women, 24 patients with severe PE, and 18 patients with moderate PE. Rearranged mRNA sequences were assigned to their germline V, D, and J counterparts, and translated into proper amino acids by the IMGT database. In general, PE samples had more TRB-CDR3 reads and types than those of normal pregnant woman in the circulation, but the mean number of TRB-CDR3 reads and unique TRB-CDR3 reads in severe group was lower than that in the moderate group. In PE patients, the V7_9 and V20_1 gene loci were more prevalent than in healthy pregnant women. In addition, 4 kinds of TRB-CDR3 peptides were found to be highly relevant to the pathogenesis of PE. Of them, peptides matched to herpes simplex virus antigen-specific T cells were much lower in PE samples.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Pre-Eclampsia / Genetic Variation / Receptors, Antigen, T-Cell, alpha-beta / Genes, T-Cell Receptor beta / Complementarity Determining Regions Limits: Adult / Female / Humans / Pregnancy Language: En Journal: Hum Immunol Year: 2019 Type: Article Affiliation country: China

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Pre-Eclampsia / Genetic Variation / Receptors, Antigen, T-Cell, alpha-beta / Genes, T-Cell Receptor beta / Complementarity Determining Regions Limits: Adult / Female / Humans / Pregnancy Language: En Journal: Hum Immunol Year: 2019 Type: Article Affiliation country: China