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Laboratory validation of a clinical metagenomic sequencing assay for pathogen detection in cerebrospinal fluid.
Miller, Steve; Naccache, Samia N; Samayoa, Erik; Messacar, Kevin; Arevalo, Shaun; Federman, Scot; Stryke, Doug; Pham, Elizabeth; Fung, Becky; Bolosky, William J; Ingebrigtsen, Danielle; Lorizio, Walter; Paff, Sandra M; Leake, John A; Pesano, Rick; DeBiasi, Roberta; Dominguez, Samuel; Chiu, Charles Y.
Affiliation
  • Miller S; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Naccache SN; UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, California 94143, USA.
  • Samayoa E; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Messacar K; UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, California 94143, USA.
  • Arevalo S; Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles, Los Angeles, California 90027, USA.
  • Federman S; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Stryke D; Department of Pediatrics, Children's Hospital Colorado and University of Colorado School of Medicine, Aurora, Colorado 80045, USA.
  • Pham E; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Fung B; UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, California 94143, USA.
  • Bolosky WJ; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Ingebrigtsen D; UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, California 94143, USA.
  • Lorizio W; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Paff SM; UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, California 94143, USA.
  • Leake JA; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Pesano R; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • DeBiasi R; Microsoft Research, Redmond, Washington 98052, USA.
  • Dominguez S; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Chiu CY; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
Genome Res ; 29(5): 831-842, 2019 05.
Article in En | MEDLINE | ID: mdl-30992304
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Encephalitis / Metagenomics / High-Throughput Nucleotide Sequencing / Meningitis, Aseptic / Myelitis Type of study: Diagnostic_studies / Prognostic_studies Limits: Child / Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2019 Type: Article Affiliation country: United States
Fulltext
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PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Encephalitis / Metagenomics / High-Throughput Nucleotide Sequencing / Meningitis, Aseptic / Myelitis Type of study: Diagnostic_studies / Prognostic_studies Limits: Child / Humans Language: En Journal: Genome Res Journal subject: BIOLOGIA MOLECULAR / GENETICA Year: 2019 Type: Article Affiliation country: United States