Modeling protein-protein, protein-peptide, and protein-oligosaccharide complexes: CAPRI 7th edition.

Lensink, Marc F; Nadzirin, Nurul; Velankar, Sameer; Wodak, Shoshana J

Lensink, Marc F; Nadzirin, Nurul; Velankar, Sameer; Wodak, Shoshana J.

Affiliation

Lensink MF; University of Lille, CNRS UMR8576 UGSF, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000, Lille, France.
Nadzirin N; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Cambridge, UK.
Velankar S; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Cambridge, UK.
Wodak SJ; VIB-VUB Structural Biology Research Center, Brussels, Belgium.

Proteins ; 88(8): 916-938, 2020 08.

Article in En | MEDLINE | ID: mdl-31886916

Subject(s)

Molecular Docking Simulation; Oligosaccharides/chemistry; Peptides/chemistry; Proteins/chemistry; Software; Amino Acid Sequence; Binding Sites; Humans; Ligands; Oligosaccharides/metabolism; Peptides/metabolism; Protein Binding; Protein Conformation, alpha-Helical; Protein Conformation, beta-Strand; Protein Interaction Domains and Motifs; Protein Interaction Mapping; Proteins/metabolism; Research Design; Structural Homology, Protein

Key words

CAPRI; blind prediction; docking; protein assemblies; protein complexes; protein docking; protein-peptide interaction; protein-polysaccharide interaction; protein-protein interaction

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Oligosaccharides / Peptides / Software / Proteins / Molecular Docking Simulation Type of study: Prognostic_studies Limits: Humans Language: En Journal: Proteins Journal subject: BIOQUIMICA Year: 2020 Type: Article Affiliation country: France

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