Detection of transcription factors binding to methylated DNA by deep recurrent neural network.

Li, Hongfei; Gong, Yue; Liu, Yifeng; Lin, Hao; Wang, Guohua

Li, Hongfei; Gong, Yue; Liu, Yifeng; Lin, Hao; Wang, Guohua.

Affiliation

Li H; College of Information and Computer Engineering at Northeast Forestry University of China.
Gong Y; College of Information and Computer Engineering at Northeast Forestry University of China.
Liu Y; School of management at Henan Institute of Technology of China.
Lin H; Center for Informational Biology at University of Electronic Science and Technology of China.
Wang G; College of Information and Computer Engineering at Northeast Forestry University of China.

Brief Bioinform ; 23(1)2022 01 17.

Article in En | MEDLINE | ID: mdl-34962264

Subject(s)

DNA Methylation; Neural Networks, Computer; Transcription Factors/metabolism; Algorithms; Binding Sites; DNA/genetics; DNA-Binding Proteins; Deep Learning; Gene Expression Regulation; Humans; Protein Binding

Key words

deep recurrent neural network; methylated DNA; transcription factors; tripeptide; tripeptide word vector

Fulltext

XML

PubMed Links

Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Transcription Factors / Neural Networks, Computer / DNA Methylation Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: Brief Bioinform Journal subject: BIOLOGIA / INFORMATICA MEDICA Year: 2022 Type: Article

Fulltext

XML

PubMed Links

Search on Google