Transposable element finder (TEF): finding active transposable elements from next generation sequencing data.

Miyao, Akio; Yamanouchi, Utako

Miyao, Akio; Yamanouchi, Utako.

Affiliation

Miyao A; Institute of Crop Science, National Agriculture and Food Research Organization, 2-1-2, Kannondai, Tsukuba, Ibaraki, 305-8518, Japan. miyao@affrc.go.jp.
Yamanouchi U; Institute of Crop Science, National Agriculture and Food Research Organization, 2-1-2, Kannondai, Tsukuba, Ibaraki, 305-8518, Japan.

BMC Bioinformatics ; 23(1): 500, 2022 Nov 22.

Article in En | MEDLINE | ID: mdl-36418944

Subject(s)

DNA Transposable Elements; Oryza; Animals; High-Throughput Nucleotide Sequencing/methods; Gene Library; Algorithms; Polymerase Chain Reaction; Drosophila/genetics; Oryza/genetics

Key words

Next generation sequence; Retrotransposon; Target site duplication; Tos17; Transposable element

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Oryza / DNA Transposable Elements Type of study: Diagnostic_studies Limits: Animals Language: En Journal: BMC Bioinformatics Journal subject: INFORMATICA MEDICA Year: 2022 Type: Article Affiliation country: Japan

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