Your browser doesn't support javascript.
loading
Complete Genome Sequence Resource of Pectobacterium colocasium Strain F1-1 that Causes Soft Rot Disease of Taro.
Huang, Chien-Jui; Wu, Ting-Li; Zheng, Po-Xing; Ou, Jheng-Yang; Ting, Chao-Ling; Lin, Yao-Cheng.
Affiliation
  • Huang CJ; Department of Plant Medicine, National Chiayi University, Chiayi 600355, Taiwan.
  • Wu TL; Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, Tainan, Taiwan.
  • Zheng PX; Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, Tainan, Taiwan.
  • Ou JY; Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, Tainan, Taiwan.
  • Ting CL; Crop Improvement Division, Miaoli District Agricultural Research and Extension Station, Council of Agriculture, Executive Yuan, Guannan, Miaoli 363201, Taiwan.
  • Lin YC; Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, Tainan, Taiwan.
Plant Dis ; 107(6): 1911-1915, 2023 Jun.
Article in En | MEDLINE | ID: mdl-36451306
Pectobacterium colocasium is a recently named, narrow-host-range phytopathogenic bacterium causing soft rot of taro (Colocasium esculenta). It is found on the Chinese mainland and the island of Taiwan. Taro is a domesticated crop with a long history of cultivation in Taiwan and the Pacific islands. However, not much was known about Pectobacterium spp. from taro, especially from the islands in the Pacific. Herein, we report a high-quality, completely annotated genome sequence of P. colosacium strain F1-1. The 4,816,345 bp genome, which was assembled with Illumina and Nanopore reads with 217× and 311× coverage, respectively, consists of one chromosome and no plasmid. This completely circularized genome will aid future studies in comparative genomics, evolution, and pathogenicity of P. colocasium. This genome resource will also be helpful for developing strategies to control P. colocasium in taro.[Formula: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Colocasia / Pectobacterium / Nanopores Type of study: Etiology_studies Language: En Journal: Plant Dis Year: 2023 Type: Article Affiliation country: Taiwan

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Colocasia / Pectobacterium / Nanopores Type of study: Etiology_studies Language: En Journal: Plant Dis Year: 2023 Type: Article Affiliation country: Taiwan