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The complete mitochondrial genome of Pseudofabraea citricarpa (Dermateaceae: Helotiales) causing Citrus target spot.
Li, Hui; Xu, Songlin; Yang, Mei; Zhang, Wenjing; He, Jinhui; Duan, Zhengang; Ding, Mingliang; Chen, Quan.
Affiliation
  • Li H; Chongqing Three Gorges Academy of Agricultural Sciences, Chongqing, China.
  • Xu S; College of Biology and Food Engineering, Chongqing Three Gorges University, Wanzhou, China.
  • Yang M; Food Crops Research Institute, Yunnan Academy of Agriculture Sciences, Kunming, China.
  • Zhang W; Chongqing Three Gorges Academy of Agricultural Sciences, Chongqing, China.
  • He J; College of Biology and Food Engineering, Chongqing Three Gorges University, Wanzhou, China.
  • Duan Z; Chongqing Three Gorges Academy of Agricultural Sciences, Chongqing, China.
  • Ding M; College of Biology and Food Engineering, Chongqing Three Gorges University, Wanzhou, China.
  • Chen Q; Chongqing Three Gorges Academy of Agricultural Sciences, Chongqing, China.
Mitochondrial DNA B Resour ; 8(11): 1161-1164, 2023.
Article in En | MEDLINE | ID: mdl-38188430
ABSTRACT
Pseudofabraea citricarpa (Dermateaceae Helotiales) is known as a significant pathogen causing Citrus target spot disease and results in profound yield loss. In the present study, the complete mitochondrial genome (mitogenome) determined based on next-generation sequencing technology. The circular mitogenome (56,935 bp) comprised 14 conserved protein-coding genes (PCGs), 16 ORFs, two ribosomal RNA genes (rns and rnl), one non-coding RNA gene (rnpB), one ribosomal protein S3 (rps3) and 28 transfer RNA (tRNA) genes. The overall base composition is as follows 36.08% A, 35.25% T, 13.04% C, and 15.63% G, with a GC content of 28.70%. The phylogenetic analysis shows that P. citricarpa, belonging to Dermateaceae, forms a separate clade and is sister to Sclerotiniaceae. The mitogenome of P. citricarpa reported in this study provides more molecular data for further research on the evolutionary relationships of Helotiales.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Mitochondrial DNA B Resour Year: 2023 Type: Article Affiliation country: China

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Mitochondrial DNA B Resour Year: 2023 Type: Article Affiliation country: China