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Effects of bursty synthesis in organelle biogenesis.
Banerjee, Binayak; Das, Dipjyoti.
Affiliation
  • Banerjee B; Department of Biological Sciences, Indian Institute of Science Education and Research Kolkata, Nadia 741 246, West Bengal, India.
  • Das D; Department of Biological Sciences, Indian Institute of Science Education and Research Kolkata, Nadia 741 246, West Bengal, India. Electronic address: dipjyoti.das@iiserkol.ac.in.
Math Biosci ; 370: 109156, 2024 Apr.
Article in En | MEDLINE | ID: mdl-38346665
ABSTRACT
A fundamental question of cell biology is how cells control the number of organelles. The processes of organelle biogenesis, namely de novo synthesis, fission, fusion, and decay, are inherently stochastic, producing cell-to-cell variability in organelle abundance. In addition, experiments suggest that the synthesis of some organelles can be bursty. We thus ask how bursty synthesis impacts intracellular organelle number distribution. We develop an organelle biogenesis model with bursty de novo synthesis by considering geometrically distributed burst sizes. We analytically solve the model in biologically relevant limits and provide exact expressions for the steady-state organelle number distributions and their means and variances. We also present approximate solutions for the whole model, complementing with exact stochastic simulations. We show that bursts generally increase the noise in organelle numbers, producing distinct signatures in noise profiles depending on different mechanisms of organelle biogenesis. We also find different shapes of organelle number distributions, including bimodal distributions in some parameter regimes. Notably, bursty synthesis broadens the parameter regime of observing bimodality compared to the 'non-bursty' case. Together, our framework utilizes number fluctuations to elucidate the role of bursty synthesis in producing organelle number heterogeneity in cells.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Organelle Biogenesis Language: En Journal: Math Biosci Year: 2024 Type: Article Affiliation country: India

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Organelle Biogenesis Language: En Journal: Math Biosci Year: 2024 Type: Article Affiliation country: India