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Automated detection of protein unfolding events in atomic force microscopy force curves.
García-Massó, Xavier; Huber, Matthias C; Friedmann, Jacqueline; Gonzalez, Luis M; Schiller, Stefan M; Toca-Herrera, José L.
Afiliação
  • García-Massó X; Department of Teaching Music, Arts and Body Expression, University of Valencia, Valencia, Spain.
  • Huber MC; Center for Biosystems Analysis, Habsburger Str. 49, Albert-Ludwigs-University Freiburg, Freiburg, 79104, Germany.
  • Friedmann J; Freiburg Institute for Advanced Studies, Alberstr. 19, Freiburg im Breisgau, 79104, Germany.
  • Gonzalez LM; Institute for Biophysics, Department of Nanobiotechnology, University of Natural Resources and Life Sciences, Vienna, Austria.
  • Schiller SM; Department of Physical Education and Sport, University of Valencia, Valencia, Spain.
  • Toca-Herrera JL; Center for Biosystems Analysis, Habsburger Str. 49, Albert-Ludwigs-University Freiburg, Freiburg, 79104, Germany.
Microsc Res Tech ; 79(11): 1105-1111, 2016 Nov.
Article em En | MEDLINE | ID: mdl-27571574
Atomic force microscopy is not only a high-resolution imaging device but also a mechanical machine, which can be used either to indent or stretch (soft) biomaterials. Due to the statistical nature of such materials (i.e., hydrogels or polymers) hundreds of force-distance curves are required to describe their mechanical properties. In this manuscript, we present an automated system for polymer unfolding detection based on continuous wavelet analysis. We have tested the automated program on elastin, which is an important protein that provides elasticity to tissues and organs. Our results show that elastin changes its mechanical behavior in the presence of electrolytes. In particular, we show that NaCl has a different effect on the contour length than CaCl2 for similar unfolding forces. In addition, we provide the program in the supporting information for the researches facing such kind of problem.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Algoritmos / Microscopia de Força Atômica / Desdobramento de Proteína Tipo de estudo: Diagnostic_studies Idioma: En Revista: Microsc Res Tech Assunto da revista: DIAGNOSTICO POR IMAGEM Ano de publicação: 2016 Tipo de documento: Article País de afiliação: Espanha

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Algoritmos / Microscopia de Força Atômica / Desdobramento de Proteína Tipo de estudo: Diagnostic_studies Idioma: En Revista: Microsc Res Tech Assunto da revista: DIAGNOSTICO POR IMAGEM Ano de publicação: 2016 Tipo de documento: Article País de afiliação: Espanha