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Nucleotide spacing distribution analysis for human genome.
Górski, Andrzej Z; Piwowar, Monika.
Afiliação
  • Górski AZ; Polish Academy of Sciences, Institute of Nuclear Physics, Radzikowskiego 152 st, 31-342, Kraków, Poland.
  • Piwowar M; Jagiellonian University, Collegium Medicum, Kopernika 7E st, 31-034, Kraków, Poland. mpiwowar@cm-uj.krakow.pl.
Mamm Genome ; 32(2): 123-128, 2021 04.
Article em En | MEDLINE | ID: mdl-33723659
The distribution of nucleotides spacing in human genome was investigated. An analysis of the frequency of occurrence in the human genome of different sequence lengths flanked by one type of nucleotide was carried out showing that the distribution has no self-similar (fractal) structure. The results nevertheless revealed several characteristic features: (i) the distribution for short-range spacing is quite similar to the purely stochastic sequences; (ii) the distribution for long-range spacing essentially deviates from the random sequence distribution, showing strong long-range correlations; (iii) the differences between (A, T) and (C, G) nucleotides are quite significant; (iv) the spacing distribution displays tiny oscillations.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Composição de Bases / Genoma Humano / Genômica / Nucleotídeos Tipo de estudo: Prognostic_studies Limite: Humans Idioma: En Revista: Mamm Genome Assunto da revista: GENETICA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Polônia

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Composição de Bases / Genoma Humano / Genômica / Nucleotídeos Tipo de estudo: Prognostic_studies Limite: Humans Idioma: En Revista: Mamm Genome Assunto da revista: GENETICA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Polônia