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Plugin-based interoperability and ecosystem management for the MolSSI Driver Interface Project.
Barnes, T A; Ellis, S; Chen, J; Plimpton, S J; Nash, J A.
Afiliação
  • Barnes TA; Molecular Sciences Software Institute, Blacksburg, Virginia 24060, USA.
  • Ellis S; Molecular Sciences Software Institute, Blacksburg, Virginia 24060, USA.
  • Chen J; Molecular Sciences Software Institute, Blacksburg, Virginia 24060, USA.
  • Plimpton SJ; Temple University, Philadelphia, Pennsylvania 19122, USA.
  • Nash JA; Molecular Sciences Software Institute, Blacksburg, Virginia 24060, USA.
J Chem Phys ; 160(21)2024 Jun 07.
Article em En | MEDLINE | ID: mdl-38832733
ABSTRACT
The MolSSI Driver Interface (MDI) Project is an effort to simplify and standardize the process of enabling tight interoperability between independently developed code bases and is supported by numerous software packages across the domain of chemical physics. It enables a wide variety of use cases, including quantum mechanics/molecular mechanics, advanced sampling, path integral molecular dynamics, machine learning, ab initio molecular dynamics, etc. We describe two major developments within the MDI Project that provide novel solutions to key interoperability challenges. The first of these is the development of the MDI Plugin System, which allows MDI-supporting libraries to be used as highly modular plugins, with MDI enforcing a standardized application programming interface across plugins. Codes can use these plugins without linking against them during their build process, and end-users can select which plugin(s) they wish to use at runtime. The MDI Plugin System features a sophisticated callback system that allows codes to interact with plugins on a highly granular level and represents a significant advancement toward increased modularity among scientific codes. The second major development is MDI Mechanic, an ecosystem management tool that utilizes Docker containerization to simplify the process of developing, validating, maintaining, and deploying MDI-supporting codes. Additionally, MDI Mechanic provides a framework for launching MDI simulations in which each interoperating code is executed within a separate computational environment. This eliminates the need to compile multiple production codes within a single computational environment, reducing opportunities for dependency conflicts and lowering the barrier to entry for users of MDI-enabled codes.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: J Chem Phys Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: J Chem Phys Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Estados Unidos