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1.
Opt Express ; 32(8): 14770-14779, 2024 Apr 08.
Artículo en Inglés | MEDLINE | ID: mdl-38859413

RESUMEN

We computationally and analytically investigate the plasmon near-field coupling phenomenon and the associated universal scaling behavior in a pair of coupled shifted-core coaxial nano-cavities. Each nano-cavity is composed of an InGaAsP gain medium sandwiched between a silver (Ag) core and an Ag shell. The evanescent coupling between the cavities lifts the degeneracy of the cut-off free transverse electromagnetic (TEM) like mode. The mode splitting of the supermodes is intensified by shifting the metal core position, which induces symmetry breaking. This coupling phenomenon is explained with spring-capacitor analogy and circuit analysis. The numerical simulation results reveal an exponential decay in the fractional plasmon wavelength relative to the ratio of gap distance and core shifting distance, which aligns with the plasmon ruler equation. In addition, by shifting the Ag cores in both cavities toward the center of the coupled structure, the electromagnetic field becomes strongly localized in nanoscale regions (hotspots) in the gain medium between the cavities, thus achieving extreme plasmonic nanofocusing. Utilizing this nanofocusing effect, we propose a refractive index sensor by placing a fluidic channel between the two cavities in close vicinity to the hotspots and reaching the highest sensitivity of ∼700nm/RIU.

2.
Sci Rep ; 14(1): 10315, 2024 05 05.
Artículo en Inglés | MEDLINE | ID: mdl-38705879

RESUMEN

Several studies have shown an association between prostate carcinoma (PCa) and Epstein-Barr virus (EBV); however, none of the studies so far have identified the histopathological and genetic markers of cancer aggressiveness associated with EBV in PCa tissues. In this study, we used previously characterized EBV-PCR-positive (n = 39) and EBV-negative (n = 60) PCa tissues to perform an IHC-based assessment of key histopathological and molecular markers of PCa aggressiveness (EMT markers, AR expression, perineural invasion, and lymphocytic infiltration characterization). Additionally, we investigated the differential expression of key oncogenes, EMT-associated genes, and PCa-specific oncomiRs, in EBV-positive and -negative tissues, using the qPCR array. Finally, survival benefit analysis was also performed in EBV-positive and EBV-negative PCa patients. The EBV-positive PCa exhibited a higher percentage (80%) of perineural invasion (PNI) compared to EBV-negative PCa (67.3%) samples. Similarly, a higher lymphocytic infiltration was observed in EBV-LMP1-positive PCa samples. The subset characterization of T and B cell lymphocytic infiltration showed a trend of higher intratumoral and tumor stromal lymphocytic infiltration in EBV-negative tissues compared with EBV-positive tissues. The logistic regression analysis showed that EBV-positive status was associated with decreased odds (OR = 0.07; p-value < 0.019) of CD3 intratumoral lymphocytic infiltration in PCa tissues. The analysis of IHC-based expression patterns of EMT markers showed comparable expression of all EMT markers, except vimentin, which showed higher expression in EBV-positive PCa tissues compared to EBV-negative PCa tissues. Furthermore, gene expression analysis showed a statistically significant difference (p < 0.05) in the expression of CDH1, AR, CHEK-2, CDKN-1B, and CDC-20 and oncomiRs miR-126, miR-152-3p, miR-452, miR-145-3p, miR-196a, miR-183-3p, and miR-146b in EBV-positive PCa tissues compared to EBV-negative PCa tissues. Overall, the survival proportion was comparable in both groups. The presence of EBV in the PCa tissues results in an increased expression of certain oncogenes, oncomiRs, and EMT marker (vimentin) and a decrease in CD3 ITL, which may be associated with the aggressive forms of PCa.


Asunto(s)
Biomarcadores de Tumor , Infecciones por Virus de Epstein-Barr , Herpesvirus Humano 4 , Neoplasias de la Próstata , Humanos , Masculino , Neoplasias de la Próstata/genética , Neoplasias de la Próstata/patología , Neoplasias de la Próstata/virología , Neoplasias de la Próstata/mortalidad , Neoplasias de la Próstata/metabolismo , Herpesvirus Humano 4/genética , Infecciones por Virus de Epstein-Barr/virología , Infecciones por Virus de Epstein-Barr/genética , Infecciones por Virus de Epstein-Barr/patología , Infecciones por Virus de Epstein-Barr/complicaciones , Biomarcadores de Tumor/genética , Anciano , Regulación Neoplásica de la Expresión Génica , Marcadores Genéticos , Persona de Mediana Edad , Linfocitos Infiltrantes de Tumor/inmunología , Transición Epitelial-Mesenquimal/genética , Invasividad Neoplásica
4.
Environ Sci Pollut Res Int ; 30(50): 109181-109197, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-37759059

RESUMEN

Members of the Gulf Cooperation Council countries Bahrain, Kuwait, Oman, Qatar, Saudi Arabia, and the United Arab Emirates rely on desalination to produce water for domestic use. Desalination produces brine that may intrude into the aquifers to pollute the fresh groundwater because of the concentration gradient and groundwater pumping. Modeling the trends of saltwater intrusion needs theoretical understanding and thorough logical experimentation. The objective of this exercise was to understand the phenomenon of saltwater intrusion using an existing set of data analyzed with the convective-diffusion equation and the two-region mobile-immobile solution model. The objective was achieved by optimizing non-measurable solute transport parameters from an existing set of data generated from a series of logical miscible displacements of potassium bromide through sepiolite minerals and curve-fitting simulations. Assumptions included that solute displacements through sepiolite porous media and the related simulations represented the phenomenon of saltwater intrusion under non-equilibrium conditions of porous media mimicking the aquifers. Miscible displacements of potassium bromide were observed from a column of 2.0-2.8 mm aggregates of sepiolite over 4 ranges of concentration and at 11 displacement speeds under saturated vertical flow deionized water and vice versa. Breakthrough curves of both bromide and potassium ions were analyzed by a curve-fitting technique to optimize transport parameters assuming solute movement was governed (i) by the convective-diffusion equation and (ii) the two-region mobile-immobile solution model. Column Peclet numbers from the two analyses were identical for potassium ions but those for bromide ions were c. 60% greater from the two-region model than from the convective-diffusion equation. For the two-region model, dispersion coefficients were well defined and remained unchanged from the convective-diffusion equation for potassium ions but decreased for bromide ions. Retardation factors for bromide ions were approximately the same, but those for potassium ions, though > 1, were poorly defined. In order to design mitigation strategies for avoiding groundwater contamination, this study's findings may help model groundwater pollution caused by the activities of desalination of seawater, which produces concentrated liquid that intrudes into the coastal aquifer through miscible displacement. However, robust saltwater intrusion models may be considered in future studies to confirm the results of the approach presented in this exercise. Field data on the groundwater contamination levels may be collected to compare with simulated trends drawn from the saltwater intrusion models and the curve-fitting technique used in this work. A comparison of the output from the two types of models may help determine the right option to understand the phenomena of saltwater intrusion into coastal aquifers of various characteristics.


Asunto(s)
Bromuros , Agua Subterránea , Bromuros/análisis , Agua Subterránea/análisis , Agua/análisis , Agua de Mar/análisis , Iones/análisis , Potasio/análisis , Monitoreo del Ambiente
5.
Plants (Basel) ; 12(10)2023 May 16.
Artículo en Inglés | MEDLINE | ID: mdl-37653921

RESUMEN

Light is an important environmental signal that governs plant growth, development, and metabolism. Constitutive photomorphogenic 1 (COP1) is a light signaling component that plays a vital role in plant light responses. We isolated the COP1 gene (LoCOP1) from the petals of Lilium 'Siberia' and investigated its function. The LoCOP1 protein was found to be the most similar to Apostasia shenzhenica COP1. LoCOP1 was found to be an important factor located in the nucleus and played a negative regulatory role in floral scent production and emission using the virus-induced gene silencing (VIGS) approach. The yeast two-hybrid, ß-galactosidase, and bimolecular fluorescence complementation (BiFC) assays revealed that LoCOP1 interacts with LoMYB1 and LoMYB3. Furthermore, light modified both the subcellular distribution of LoCOP1 and its interactions with LoMYB1 and MYB3 in onion cells. The findings highlighted an important regulatory mechanism in the light signaling system that governs scent emission in Lilium 'Siberia' by the ubiquitination and degradation of transcription factors via the proteasome pathway.

7.
Sci Rep ; 13(1): 10198, 2023 06 23.
Artículo en Inglés | MEDLINE | ID: mdl-37353530

RESUMEN

An operator of a wild blueberry harvester faces the fatigue of manually adjusting the height of the harvester's head, considering spatial variations in plant height, fruit zone, and field topography affecting fruit yield. For stress-free harvesting of wild blueberries, a deep learning-supported machine vision control system has been developed to detect the fruit height and precisely auto-adjust the header picking teeth rake position. The OpenCV AI Kit (OAK-D) was used with YOLOv4-tiny deep learning model with code developed in Python to solve the challenge of matching fruit heights with the harvester's head position. The system accuracy was statistically evaluated with R2 (coefficient of determination) and σ (standard deviation) measured on the difference in distances between the berries picking teeth and average fruit heights, which were 72, 43% and 2.1, 2.3 cm for the auto and manual head adjustment systems, respectively. This innovative system performed well in weed-free areas but requires further work to operate in weedy sections of the fields. Benefits of using this system include automated control of the harvester's head to match the header picking rake height to the level of the fruit height while reducing the operator's stress by creating safer working environments.


Asunto(s)
Arándanos Azules (Planta) , Aprendizaje Profundo , Abuso de Marihuana , Fatiga , Frutas
8.
Plants (Basel) ; 12(9)2023 Apr 24.
Artículo en Inglés | MEDLINE | ID: mdl-37176806

RESUMEN

Plants produce an incredible variety of volatile organic compounds (VOCs) that assist the interactions with their environment, such as attracting pollinating insects and seed dispersers and defense against herbivores, pathogens, and parasites. Furthermore, VOCs have a significant economic impact on crop quality, as well as the beverage, food, perfume, cosmetics and pharmaceuticals industries. These VOCs are mainly classified as terpenoids, benzenoids/phenylpropanes, and fatty acid derivates. Fruits and vegetables are rich in minerals, vitamins, antioxidants, and dietary fiber, while aroma compounds play a major role in flavor and quality management of these horticultural commodities. Subtle shifts in aroma compounds can dramatically alter the flavor and texture of fruits and vegetables, altering their consumer appeal. Rapid innovations in -omics techniques have led to the isolation of genes encoding enzymes involved in the biosynthesis of several volatiles, which has aided to our comprehension of the regulatory molecular pathways involved in VOC production. The present review focuses on the significance of aroma volatiles to the flavor and aroma profile of horticultural crops and addresses the industrial applications of plant-derived volatile terpenoids, particularly in food and beverages, pharmaceuticals, cosmetics, and biofuel industries. Additionally, the methodological constraints and complexities that limit the transition from gene selection to host organisms and from laboratories to practical implementation are discussed, along with metabolic engineering's potential for enhancing terpenoids volatile production at the industrial level.

9.
Physiol Plant ; 175(3): e13914, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37072650

RESUMEN

Hydrangea (Hydrangea arborescens var. "Annabelle") flowers are composed of sweet aroma sepals rather than true petals and can change color. Floral volatiles plays important roles in plants, such as attracting pollinators, defending against herbivores, and signaling. However, the biosynthesis and regulatory mechanisms underlying fragrance formation in H. arborescens during flower development remain unknown. In this study, a combination of metabolite profiling and RNA sequencing (RNA-seq) was employed to identify genes associated with floral scent biosynthesis mechanisms in "Annabelle" flowers at three developmental stages (F1, F2, and F3). The floral volatile data revealed that the "Annabelle" volatile profile includes a total of 33 volatile organic compounds (VOCs), and VOCs were abundant during the F2 stage of flower development, followed by the F1 and F3 stages, respectively. Terpenoids and benzenoids/phenylpropanoids were abundant during the F2 and F1 stages, with the latter being the most abundant, whereas fatty acid derivatives and other compounds were found in large amounts during the F3 stage. According to ultra-performance liquid chromatography-tandem mass spectrometer analysis, benzene and substituted derivatives, carboxylic acids and derivatives, and fatty acyls play a significant role in the floral metabolite profile. The transcriptome data revealed a total of 17,461 differentially expressed genes (DEGs), with 7585, 12,795, and 9044 DEGs discovered between the F2 and F1, F3 and F1, and F2 and F3 stages, respectively. Several terpenoids and benzenoids/phenylpropanoids biosynthesis-related DEGs were identified, and GRAS/bHLH/MYB/AP2/WRKY were more abundant among transcription factors. Finally, DEGs interlinked with VOCs compounds were determined using Cytoscape and k-means analysis. Our results pave the way for the discovery of new genes, critical data for future genetic studies, and a platform for the metabolic engineering of genes involved in the production of Hydrangea's signature floral fragrance.


Asunto(s)
Hydrangea , Hydrangea/genética , Hydrangea/metabolismo , Odorantes , Perfilación de la Expresión Génica/métodos , Terpenos/metabolismo , Transcriptoma , Metaboloma , Flores/metabolismo
10.
J Exp Bot ; 74(12): 3613-3629, 2023 06 27.
Artículo en Inglés | MEDLINE | ID: mdl-36928543

RESUMEN

In flowering plants, floral induction signals intersect at the shoot apex to modulate meristem determinacy and growth form. Here, we report a single-nucleus RNA sequence analysis of litchi apical buds at different developmental stages. A total of 41 641 nuclei expressing 21 402 genes were analyzed, revealing 35 cell clusters corresponding to 12 broad populations. We identify genes associated with floral transition and propose a model that profiles the key events associated with litchi floral meristem identity by analyzing 567 identified floral meristem cells at single cell resolution. Interestingly, single-nucleus RNA-sequencing data indicated that all putative FT and TFL1 genes were not expressed in bud nuclei, but significant expression was detected in bud samples by RT-PCR. Based on the expression patterns and gene silencing results, we highlight the critical role of LcTFL1-2 in inhibiting flowering and propose that the LcFT1/LcTFL1-2 expression ratio may determine the success of floral transition. In addition, the transport of LcFT1 and LcTFL1-2 mRNA from the leaf to the shoot apical meristem is proposed based on in situ and dot-blot hybridization results. These findings allow a more comprehensive understanding of the molecular events during the litchi floral transition, as well as the identification of new regulators.


Asunto(s)
Flores , Litchi , ARN Mensajero/genética , ARN Mensajero/metabolismo , Hojas de la Planta/metabolismo , Análisis de Secuencia de ARN/métodos , Meristema , Regulación de la Expresión Génica de las Plantas
11.
Heliyon ; 9(2): e13417, 2023 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-36825187

RESUMEN

Species distribution modelling (SDM) is an important tool to examine the possible change in the population range and/or niche-shift under current environment and predicted climate change. Monotheca buxifolia is an economically and ecologically important tree species inhabiting Pakistan and Afghanistan in dense patches, and species range is contracting rapidly. This study hypothesize that predicted climate change might remarkably influence the existing distribution pattern of M. buxifolia in the study area. A total of 75 occurrence locations were identified comprising M. buxifolia as a dominant tree species. The Maximum Entropy (MaxEnt) algorithm was utilized to perform the SDM under current (the 1970s-2000s) and two future climate change scenarios (shared socioeconomic pathways: SSPs 245 and 585) of two time periods (the 2050s and 2070s). The optimal model settings were assessed, and simulation precision was assessed by examining the partial area under the receiver operating characteristic curve (pAUC-ROC). The results showed that out of 39 considered bio-climatic, topographic, edaphic, and remote sensing variables which were utilized in the preliminary model, 6 variables including precipitation of warmest quarter, topographic diversity, global human modification of terrestrial land, normalized difference vegetation index, isothermality, and elevation (in order) were the most influential drivers, and utilized in all reduced SDMs. A high predictive performance (pAUC-ROC; >0.9) of all the considered SDMs was recorded. A total of about 67,684 km2 of geographical area was predicted as suitable habitat (p > 0.8) for M. buxifolia, and Pakistan is the leading country (with about 54,975 km2 of suitable land area) under the current climate scenario. Overall, the existing distribution of the tree species in the study area might face considerable loss (i.e. rate of change %; -27 to -107) in future, and simultaneously a northward (high elevation) niche shift is predicted for all the considered future climate change scenarios. Hence, development and implementation of a coordinated conservation program is required on priority basis to save the tree species in its native geographic range.

12.
Environ Sci Pollut Res Int ; 30(44): 99261-99272, 2023 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-36773256

RESUMEN

Coronavirus disease (COVID)-19 is a viral and transferable disease caused by severe respiratory syndrome-coronavirus-2. It can spread through breathing droplets in human beings. It caused 5.32 million deaths around the world at the end of 2021. COVID-19 has caused several positive impacts as well, such as a reduction in air, water, and noise pollution. However, its negative impacts are by far critical such as increased death rate, increased release of microcontaminants (pesticides, biocides, pharmaceuticals, surfactants, polycyclic aromatic hydrocarbons (PAHs), flame retardants, and heavy metals), increased biomedical waste generation due to excessive use of safety equipment and its disposal, and municipal solid waste generation. Environmental pollution was significantly reduced due to lockdown during the COVID-19 period. Therefore, the quality of air and water improved. COVID-19 affected all sections of the population, particularly the most vulnerable members of society, and thus pushed more people into poverty. At the world level, it increased risks to food safety by increasing prices and lowering revenues, forcing households to reduce their food consumption in terms of quantity and quality. COVID-19 also upset various exercises e.g., horticulture, fisheries, domesticated animals, and agribusiness hence prohibiting the development of merchandise for poor-country ranchers. Most of the patients can self-recover from COVID-19 if they do not have any other diseases like high blood pressure, diabetes, and heart problems. Predictably, the appropriate execution of the proposed approaches (vaccination, wearing face masks, social distancing, sustainable industrialization) is helpful for worldwide environmental sustainability.


Asunto(s)
COVID-19 , Humanos , COVID-19/epidemiología , Pandemias , SARS-CoV-2 , Control de Enfermedades Transmisibles , Seguridad Alimentaria , Agua
13.
Front Plant Sci ; 14: 1065208, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-36743484

RESUMEN

Winterberry (Ilex verticillata (L.) A. Gray) is a recently introduced ornamental tree species in China that has not been closely investigated for its drought resistance. In this study, we used two-year-old cuttings from I. verticillata (L.) A. Gray and two representative varieties derived from it, I. verticillata 'Oosterwijk' and I. verticillata 'Jim Dandy', as materials to investigate how this plant responds to drought stress and whether exogenous spermidine (SPD) can alleviate the negative effects caused by drought stress. The results showed that as the degree of drought stress increased, the leaves of winterberry seedlings became chlorotic, and their edges became dry. Similarly, the relative water content, specific leaf weight, chlorophyll content, leaf nitrogen content, net photosynthetic rate, stomatal conductance and transpiration rate were significantly reduced, whereas the content of malondialdehyde continuously increased with the degree of drought stress. The activities of superoxide dismutase, peroxidase, and catalase increased under moderate drought stress and then decreased under severe drought stress. The levels of soluble sugar and abscisic acid continued to increase, while those of auxin and gibberellic acid decreased. When compared with individual drought stress, an increase in the amount of external SPD clearly alleviated the effect of drought stress on winterberry seedlings. The combined phenotypes and physiological indices of the winterberry leaves under drought stress conditions revealed that the drought resistance of the native species was significantly higher than its two varieties. This finding serves as an important theoretical foundation for the popularization and application of I. verticillata (L.) A. Gray and the two varieties.

14.
Plant Physiol ; 192(3): 1913-1927, 2023 07 03.
Artículo en Inglés | MEDLINE | ID: mdl-36843134

RESUMEN

Chlorophyll degradation and anthocyanin biosynthesis, which often occur almost synchronously during fruit ripening, are crucial for vibrant coloration of fruits. However, the interlink point between their regulatory pathways remains largely unknown. Here, 2 litchi (Litchi chinensis Sonn.) cultivars with distinctively different coloration patterns during ripening, i.e. slow-reddening/stay-green "Feizixiao" (FZX) vs rapid-reddening/degreening "Nuomici" (NMC), were selected as the materials to study the key factors determining coloration. Litchi chinensis STAY-GREEN (LcSGR) was confirmed as the critical gene in pericarp chlorophyll loss and chloroplast breakdown during fruit ripening, as LcSGR directly interacted with pheophorbide a oxygenase (PAO), a key enzyme in chlorophyll degradation via the PAO pathway. Litchi chinensis no apical meristem (NAM), Arabidopsis transcription activation factor 1/2, and cup-shaped cotyledon 2 (LcNAC002) was identified as a positive regulator in the coloration of litchi pericarp. The expression of LcNAC002 was significantly higher in NMC than in FZX. Virus-induced gene silencing of LcNAC002 significantly decreased the expression of LcSGR as well as L. chinensis MYELOBLASTOSIS1 (LcMYB1), and inhibited chlorophyll loss and anthocyanin accumulation. A dual-luciferase reporter assay revealed that LcNAC002 significantly activates the expression of both LcSGR and LcMYB1. Furthermore, yeast-one-hybrid and electrophoretic mobility shift assay results showed that LcNAC002 directly binds to the promoters of LcSGR and LcMYB1. These findings suggest that LcNAC002 is an important ripening-related transcription factor that interlinks chlorophyll degradation and anthocyanin biosynthesis by coactivating the expression of both LcSGR and LcMYB1.


Asunto(s)
Antocianinas , Litchi , Antocianinas/metabolismo , Factores de Transcripción/genética , Factores de Transcripción/metabolismo , Litchi/genética , Frutas/genética , Regulación de la Expresión Génica de las Plantas , Clorofila/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo
15.
Physiol Plant ; 175(1): e13860, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36683140

RESUMEN

Anthocyanins are health-promoting compounds with strong antioxidant properties that play important roles in disease prevention. Litchi chinensis Sonn. is a well-known and economically significant fruit due to its appealing appearance and nutritional value. The mature pericarp of litchi is rich in anthocyanins, whereas the aril (flesh) has an extremely low anthocyanin content. However, the mechanism of anthocyanin differential accumulation in litchi pericarp and aril remained unknown. Here, metabolome and transcriptome analysis were performed to unveil the cause of the deficiency of anthocyanin biosynthesis in litchi aril. Numerous anthocyanin biosynthesis-related metabolites and their derivatives were found in the aril, and the levels of rutin and (-)-epicatechin in the aril were comparable to those found in the pericarp, while anthocyanin levels were negligible. This suggests that the biosynthetic pathway from phenylalanine to cyanidin was present but that a block in cyanidin glycosylation could result in extremely low anthocyanin accumulation in the aril. Furthermore, 54 candidate genes were screened using weighted gene co-expression network analysis (WGCNA), and 9 genes (LcUFGT1, LcGST1, LcMYB1, LcSGR, LcCYP75B1, LcMATE, LcTPP, LcSWEET10, and LcERF61) might play a significant role in regulating anthocyanin biosynthesis. The dual-luciferase reporter (DLR) assay revealed that LcMYB1 strongly activated the promoters of LcUFGT1, LcGST4, and LcSWEET10. The results imply that LcMYB1 is the primary qualitative gene responsible for the deficiency of anthocyanin biosynthesis in litchi aril, which was confirmed by a transient transformation assay. Our findings shed light on the molecular mechanisms underlying tissue-specific anthocyanin accumulation and will help developing new red-fleshed litchi germplasm.


Asunto(s)
Antocianinas , Litchi , Antocianinas/metabolismo , Litchi/genética , Litchi/metabolismo , Frutas/genética , Perfilación de la Expresión Génica , Metaboloma , Transcriptoma , Regulación de la Expresión Génica de las Plantas
16.
Tree Physiol ; 43(1): 130-141, 2023 01 05.
Artículo en Inglés | MEDLINE | ID: mdl-35951668

RESUMEN

Fruit abscission is a severe hindrance to commercial crop production, and a lack of carbohydrates causes fruit abscission to intensify in a variety of plant species. However, the precise mechanism by which carbohydrates affect fruit setting potential has yet to be determined. In the current study, we noticed negative correlation between hexose level and fruit setting by comparing different cultivars, bearing shoots of varying diameters, and girdling and defoliation treatments. The cumulative fruit-dropping rate was significantly reduced in response to exogenous glucose dipping. These results suggested that hexose, especially glucose, is the key player in lowering litchi fruit abscission. Moreover, five putative litchi hexokinase genes (LcHXKs) were isolated and the subcellular localization as well as activity of their expressed proteins in catalyzing hexose phosphorylation were investigated. LcHXK2 was only found in mitochondria and expressed catalytic protein, whereas the other four HXKs were found in both mitochondria and nuclei and had no activity in catalyzing hexose phosphorylation. LcHXK1 and LcHXK4 were found in the same cluster as previously reported hexose sensors AtHXK1 and MdHXK1. Furthermore, VIGS-mediated silencing assay confirms that LcHXK1 suppression increases fruit abscission. These findings revealed that LcHXK1 functions as hexose sensor, negatively regulating litchi fruit abscission.


Asunto(s)
Frutas , Litchi , Frutas/genética , Frutas/metabolismo , Hexoquinasa/genética , Hexoquinasa/metabolismo , Litchi/genética , Litchi/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Glucosa
17.
Cells ; 11(23)2022 Dec 03.
Artículo en Inglés | MEDLINE | ID: mdl-36497177

RESUMEN

Recent advances in developmental biology have been made possible by using multi-omic studies at single cell resolution. However, progress in plants has been slowed, owing to the tremendous difficulty in protoplast isolation from most plant tissues and/or oversize protoplasts during flow cytometry purification. Surprisingly, rapid innovations in nucleus research have shed light on plant studies in single cell resolution, which necessitates high quality and efficient nucleus isolation. Herein, we present efficient nuclei isolation protocols from the leaves of ten important plants including Arabidopsis, rice, maize, tomato, soybean, banana, grape, citrus, apple, and litchi. We provide a detailed procedure for nucleus isolation, flow cytometry purification, and absolute nucleus number quantification. The nucleus isolation buffer formula of the ten plants tested was optimized, and the results indicated a high nuclei yield. Microscope observations revealed high purity after flow cytometry sorting, and the DNA and RNA quality extract from isolated nuclei were monitored by using the nuclei in cell division cycle and single nucleus RNA sequencing (snRNA-seq) studies, with detailed procedures provided. The findings indicated that nucleus yield and quality meet the requirements of snRNA-seq, cell division cycle, and likely other omic studies. The protocol outlined here makes it feasible to perform plant omic studies at single cell resolution.


Asunto(s)
Arabidopsis , Núcleo Celular , Núcleo Celular/metabolismo , Protoplastos , Arabidopsis/genética , Plantas/genética , Análisis de Secuencia de ARN
18.
Physiol Plant ; 174(6): e13840, 2022 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-36512339

RESUMEN

Plant volatile organic compounds are the most abundant and structurally diverse plant secondary metabolites. They play a key role in plant lifespan via direct and indirect plant defenses, attracting pollinators, and mediating various interactions between plants and their environment. The ecological diversity and context-dependence of plant-plant communication driven by volatiles are crucial elements that influence plant performance in different habitats. Plant volatiles are also valued for their multiple applications in food, flavor, pharmaceutical, and cosmetics industries. In the current review, we summarize recent advances that have elucidated the functions of plant volatile organic compounds as mediators of plant interaction at community and individual levels, highlighting the complexities of plant receiver feedback to various signals and cues. This review emphasizes volatile terpenoids, the most abundant class of plant volatile organic compounds, highlighting their role in plant adaptability to global climate change and stress-response pathways that are integral to plant growth and survival. Finally, we identify research gaps and suggest future research directions.


Asunto(s)
Compuestos Orgánicos Volátiles , Compuestos Orgánicos Volátiles/metabolismo , Cambio Climático , Plantas/metabolismo , Aclimatación
19.
J Coll Physicians Surg Pak ; 32(11): 1483-1485, 2022 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-36377020

RESUMEN

Pheochromocytoma classically presents with headache, diaphoresis, palpitations and, raised blood pressure. Rarely, it manifests as cardiomyopathy. Herein, we present a case of a 42-year woman who presented with heart failure and on work-up was found to have pheochromocytoma leading to Takotsubo-like cardiomyopathy. The biochemical profile revealed raised serum metanephrines and normetanephrines. CT abdomen showed a left adrenal mass. Within two weeks of presentation and before surgical excision of the mass, she recovered from cardiomyopathy. After medical optimisation, the patient underwent elective adrenalectomy, which on histological evaluation revealed pheochromocytoma. Key Words: Cardiomyopathy, Pheochromocytoma, Adrenal mass.


Asunto(s)
Neoplasias de las Glándulas Suprarrenales , Cardiomiopatías , Feocromocitoma , Cardiomiopatía de Takotsubo , Humanos , Femenino , Feocromocitoma/complicaciones , Feocromocitoma/diagnóstico , Feocromocitoma/cirugía , Cardiomiopatía de Takotsubo/etiología , Cardiomiopatía de Takotsubo/complicaciones , Neoplasias de las Glándulas Suprarrenales/complicaciones , Neoplasias de las Glándulas Suprarrenales/diagnóstico , Neoplasias de las Glándulas Suprarrenales/cirugía , Adrenalectomía , Cardiomiopatías/complicaciones
20.
Physiol Plant ; 174(6): e13796, 2022 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-36251666

RESUMEN

Volatile organic compounds (VOCs) are essential traits of flowers since they attract pollinators, aid in seed distribution, protect the plant from internal and external stimuli, and are involved in plant-plant and plant-environment interactions. Apart from their role in plants, VOCs are used in pharmaceuticals, fragrances, cosmetics, and flavorings. Litchi (Litchi chinensis Sonn.) is a popular fruit due to its enticing red appearance, exotic taste, and high nutritional qualities. Litchi flowers bloom as inflorescences primarily on the shoot terminals. There are three distinct flower types, two male and one female, all of which are produced on the same panicle and rely on insect pollination. Herein, we used a comprehensive metabolomic approach to examine the volatile profile of litchi fruit (green pericarp, yellow pericarp, and red pericarp) as well as male and female flowers (bud stage, half open and full bloom). From a quantitative examination of the volatiles in L. chinensis, a total of 19, 22, and 21 VOCs were discovered from female flowers, male flowers, and fruits, with the majority of them belonging to sesquiterpenes. Multivariate analysis revealed that the volatile profiles of fruits differ from those of male and female flowers. Three VOCs were unique to male flowers and ten to the fruit, while eight VOCs were shared by both male and female flowers and eleven by both male and female flowers and the fruit. Furthermore, for the first time, we identified and comprehensively studied the TERPENE SYNTHASE genes (TPS) using the litchi genome and transcriptome database, which revealed 38 TPS genes unevenly distributed across the 15 chromosomes. A phylogenetic study showed that LcTPS were grouped into TPS-b, TPS-c, TPS-e, TPS-f, and TPS-g subfamilies, with TPS-b having the most genes. The conserved motifs (RRX8 W, NSE/DTE, and DDXX D) were studied in LcTPSs, and significant variation between subfamilies was discovered. Furthermore, after integrating the metabolome and transcriptome datasets, several VOCs were shown to be development-specific and highly linked with distinct LcTPS genes, making them promising biomarkers. Interestingly, LcTPS17/20/23/24/31 were associated with monoterpene edges, while the rest were connected to sesquiterpene edges, indicating their probable participation in the aroma biosynthesis mechanism of certain compounds.


Asunto(s)
Litchi , Sesquiterpenos , Litchi/genética , Odorantes , Filogenia , Perfilación de la Expresión Génica , Transcriptoma/genética , Metaboloma/genética
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