Dynamic solid phase DNA extraction and PCR amplification in polyester-toner based microchip.

A variety of substrates have been used for fabrication of microchips for DNA extraction, PCR amplification, and DNA fragment separation, including the more conventional glass and silicon as well as alternative polymer-based materials. Polyester represents one such polymer, and the laser-printing of toner onto polyester films has been shown to be effective for generating polyester-toner (PeT) microfluidic devices with channel depths on the order of tens of micrometers. Here, we describe a novel and simple process that allows for the production of multilayer, high aspect-ratio PeT microdevices with substantially larger channel depths. This innovative process utilizes a CO(2) laser to create the microchannel in polyester sheets containing a uniform layer of printed toner, and multilayer devices can easily be constructed by sandwiching the channel layer between uncoated cover sheets of polyester containing precut access holes. The process allows the fabrication of deep channels, with ~270 µm, and we demonstrate the effectiveness of multilayer PeT microchips for dynamic solid phase extraction (dSPE) and PCR amplification. With the former, we found that (i) more than 65% of DNA from 0.6 µL of blood was recovered, (ii) the resultant DNA was concentrated to greater than 3 ng/µL (which was better than other chip-based extraction methods), and (iii) the DNA recovered was compatible with downstream microchip-based PCR amplification. Illustrative of the compatibility of PeT microchips with the PCR process, the successful amplification of a 520 bp fragment of λ-phage DNA in a conventional thermocycler is shown. The ability to handle the diverse chemistries associated with DNA purification and extraction is a testimony to the potential utility of PeT microchips beyond separations and presents a promising new disposable platform for genetic analysis that is low cost and easy to fabricate.

Plasma surface modification and characterization of POSS-based nanocomposite polymeric thin films.

The effect of a remote oxygen plasma on nanocomposite hybrid polymer thin films of poly[(propylmethacryl-heptaisobutyl-polyhedral oligomeric silsequioxane)-co-(methylmethacrylate)] (POSS-MA) has been examined by advancing contact angle, X-ray photoelectron spectroscopy (XPS), and variable-angle spectroscopic ellipsometry (VASE). Exposure to a 25 W remote oxygen-containing plasma was found to convert the surface of POSS-MA films from hydrophobic to hydrophilic within 20 s. The exposure time needed for this conversion to occur decreased as the O2/N2 ratio in the plasma environment increased, indicating a positive correlation between the hydrophilicity and the presence of oxygen in the plasma. Local bonding information inferred from high-resolution XPS data showed that the isobutyl bonding to the POSS moiety is replaced with oxygen as a result of plasma exposure. Finally, VASE data demonstrates that increasing the weight percent of POSS in the copolymer significantly impedes the oxygen plasma degradation of POSS-MA films. On the basis of these results, a model is presented in which the oxygen plasma removes isobutyl groups from the POSS cages and leaves a SiO2-like surface that is correspondingly more hydrophilic than the surface of the untreated samples and is more resistant to oxidation by the plasma. The ability to modify surfaces in this manner may impact the utility of this material for biomedical applications such as microfluidic devices in which the ability to control surface chemistry is critical.