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1.
Transfusion ; 63 Suppl 3: S67-S76, 2023 05.
Artículo en Inglés | MEDLINE | ID: mdl-36971031

RESUMEN

BACKGROUND: Data demonstrate the benefit of blood product administration near point-of-injury (POI). Fresh whole blood transfusion from a pre-screened donor provides a source of blood at the POI when resources are constrained. We captured transfusion skills data for medics performing autologous blood transfusion training. METHODS: We conducted a prospective, observational study of medics with varying levels of experience. Inexperienced medics were those with minimal or no reported experience learning the autologous transfusion procedures, versus reported experience among special operations medics. When available, medics were debriefed after the procedure for qualitative feedback. We followed them for up to 7 days for adverse events. RESULTS: The median number of attempts for inexperienced and experienced medics was 1 versus 1 (interquartile range 1-1 for both, p = .260). The inexperienced medics had a slower median time to needle venipuncture access for the donation of 7.3 versus 1.5 min, needle removal after clamping time of 0.3 versus 0.2 min, time to bag preparation of 1.9 versus 1.0 min, time to IV access for reinfusion of 6.0 versus 3.0 min, time to transfusion completion of 17.3 versus 11.0 min, and time to IV removal of 0.9 versus 0.3 min (all p < .05). We noted one administrative safety event in which an allogeneic transfusion occurred. No major adverse events occurred. Qualitative data saturated around the need for quarterly training. CONCLUSIONS: Inexperienced medics have longer procedure times when training autologous whole blood transfusion skills. This data will help establish training measures of performance for skills optimization when learning this procedure.


Asunto(s)
Transfusión de Sangre Autóloga , Personal Militar , Humanos , Estudios Prospectivos , Transfusión Sanguínea , Donantes de Tejidos
2.
mBio ; 9(5)2018 09 04.
Artículo en Inglés | MEDLINE | ID: mdl-30181247

RESUMEN

Nontyphoidal Salmonella (NTS), particularly Salmonella enterica serovar Typhimurium, is among the leading etiologic agents of bacterial enterocolitis globally and a well-characterized cause of invasive disease (iNTS) in sub-Saharan Africa. In contrast, S Typhimurium is poorly defined in Southeast Asia, a known hot spot for zoonotic disease with a recently described burden of iNTS disease. Here, we aimed to add insight into the epidemiology and potential impact of zoonotic transfer and antimicrobial resistance (AMR) in S Typhimurium associated with iNTS and enterocolitis in Vietnam. We performed whole-genome sequencing and phylogenetic reconstruction on 85 human (enterocolitis, carriage, and iNTS) and 113 animal S Typhimurium isolates isolated in Vietnam. We found limited evidence for the zoonotic transmission of S Typhimurium. However, we describe a chain of events where a pandemic monophasic variant of S Typhimurium (serovar I:4,[5],12:i:- sequence type 34 [ST34]) has been introduced into Vietnam, reacquired a phase 2 flagellum, and acquired an IncHI2 multidrug-resistant plasmid. Notably, these novel biphasic ST34 S Typhimurium variants were significantly associated with iNTS in Vietnamese HIV-infected patients. Our study represents the first characterization of novel iNTS organisms isolated outside sub-Saharan Africa and outlines a new pathway for the emergence of alternative Salmonella variants into susceptible human populations.IMPORTANCESalmonella Typhimurium is a major diarrheal pathogen and associated with invasive nontyphoid Salmonella (iNTS) disease in vulnerable populations. We present the first characterization of iNTS organisms in Southeast Asia and describe a different evolutionary trajectory from that of organisms causing iNTS in sub-Saharan Africa. In Vietnam, the globally distributed monophasic variant of Salmonella Typhimurium, the serovar I:4,[5],12:i:- ST34 clone, has reacquired a phase 2 flagellum and gained a multidrug-resistant plasmid to become associated with iNTS disease in HIV-infected patients. We document distinct communities of S Typhimurium and I:4,[5],12:i:- in animals and humans in Vietnam, despite the greater mixing of these host populations here. These data highlight the importance of whole-genome sequencing surveillance in a One Health context in understanding the evolution and spread of resistant bacterial infections.


Asunto(s)
Farmacorresistencia Bacteriana Múltiple , Salmonelosis Animal/epidemiología , Salmonelosis Animal/microbiología , Infecciones por Salmonella/epidemiología , Infecciones por Salmonella/microbiología , Salmonella typhimurium/clasificación , Salmonella typhimurium/efectos de los fármacos , Animales , Bacteriemia/epidemiología , Bacteriemia/microbiología , Portador Sano/epidemiología , Portador Sano/microbiología , Pollos , Transmisión de Enfermedad Infecciosa , Patos , Gastroenteritis/epidemiología , Gastroenteritis/microbiología , Variación Genética , Genotipo , Infecciones por VIH/complicaciones , Humanos , Huésped Inmunocomprometido , Epidemiología Molecular , Infecciones por Salmonella/transmisión , Salmonelosis Animal/transmisión , Salmonella typhimurium/genética , Salmonella typhimurium/aislamiento & purificación , Porcinos , Vietnam/epidemiología , Secuenciación Completa del Genoma , Zoonosis/epidemiología , Zoonosis/microbiología , Zoonosis/transmisión
3.
J Emerg Med ; 55(4): 481-488, 2018 10.
Artículo en Inglés | MEDLINE | ID: mdl-30037519

RESUMEN

BACKGROUND: Simultaneous use of nasal cannula (NC) with noninvasive positive pressure ventilation (NIPPV) may help streamline the transition from preoxygenation to intubation with apneic oxygenation in patients with deteriorating respiratory status, but may also compromise preoxygenation by impairing NIPPV mask seal. OBJECTIVES: To demonstrate that end-tidal oxygen (EtO2) after NIPPV with NC is noninferior to that of NIPPV without NC. METHODS: We conducted a randomized cross-over noninferiority study using healthy volunteers. All subjects underwent a 3-min trial of NIPPV with or without high-flow NC at 15 L/min of oxygen, followed by a 5-min washout period, and then a second 3-min trial of the opposite intervention. We randomized subjects to order of interventions. The primary outcome was postintervention EtO2 as measured by immediate exhalation into an oxygen analyzer after the 3-min ventilation period. We compared this outcome between the two study arms using an absolute 5% noninferiority margin. RESULTS: We enrolled 37 subjects, each of whom underwent both interventions of NIPPV alone and NIPPV with 15 L/min NC. The paired mean difference in EtO2 between NIPPV with NC measurements vs. NC alone measurements was 0.5% (95% confidence interval -∞ to 2.7%). Analyses stratified by order of intervention yielded similar results. CONCLUSIONS: The mean difference confidence interval did not include the noninferiority margin. Hence, NIPPV with NC seems noninferior to NIPPV alone with regard to EtO2. These results indicate that concomitant use of NC with NIPPV may be an appropriate preoxygenation strategy in anticipation of the potential need for transition to intubation.


Asunto(s)
Cánula , Ventilación no Invasiva/normas , Volumen de Ventilación Pulmonar/fisiología , Adulto , Estudios Cruzados , Femenino , Voluntarios Sanos , Humanos , Masculino , Ventilación no Invasiva/métodos , Oximetría/métodos , Oximetría/estadística & datos numéricos , Terapia por Inhalación de Oxígeno/métodos , Terapia por Inhalación de Oxígeno/normas , Estudios Prospectivos
4.
J Trauma Acute Care Surg ; 85(1S Suppl 2): S154-S160, 2018 07.
Artículo en Inglés | MEDLINE | ID: mdl-29521802

RESUMEN

BACKGROUND: Airway management is of critical importance in combat trauma patients. Airway compromise is the second leading cause of potentially survivable death on the battlefield and accounts for approximately 1 in 10 preventable deaths. Reports from the Iraq and Afghanistan wars indicate 4% to 7% incidence of airway interventions on casualties transported to combat hospitals. The goal of this study was to describe airway management in the prehospital combat setting and document airway devices used on the battlefield. METHODS: This study is a retrospective review of casualties that required a prehospital lifesaving airway intervention during combat operations in Afghanistan. We obtained data from the Prehospital Trauma Registry that was linked to the Department of Defense Trauma Registry for outcome data for the time period between January 2013 and September 2014. RESULTS: Seven hundred five total trauma patients were included, 16.9% required a prehospital airway management procedure. There were 132 total airway procedures performed, including 83 (63.4%) endotracheal intubations and 26 (19.8%) nasopharyngeal airway placements. Combat medics were involved in 48 (36.4%) of airway cases and medical officers in 73 (55.3%). Most (94.2%) patients underwent airway procedures due to battle injuries caused by explosion or gunshot wounds. Casualties requiring airway management were more severely injured and less likely to survive as indicated by Injury Severity Score, responsiveness level, Glascow Coma Scale, and outcome. CONCLUSION: Percentages of airway interventions more than tripled from previous reports from the wars in Afghanistan and Iraq. These changes are significant, and further study is needed to determine the causes. Casualties requiring airway interventions sustained more severe injuries and experienced lower survival than patients who did not undergo an airway procedure, findings suggested in previous reports. LEVEL OF EVIDENCE: Prognostic and epidemiological study, level III.


Asunto(s)
Manejo de la Vía Aérea/estadística & datos numéricos , Servicios Médicos de Urgencia/estadística & datos numéricos , Heridas Relacionadas con la Guerra/terapia , Campaña Afgana 2001- , Manejo de la Vía Aérea/métodos , Servicios Médicos de Urgencia/métodos , Femenino , Escala de Coma de Glasgow , Humanos , Puntaje de Gravedad del Traumatismo , Masculino , Medicina Militar/métodos , Medicina Militar/estadística & datos numéricos , Estudios Retrospectivos , Resultado del Tratamiento , Estados Unidos
5.
Wilderness Environ Med ; 29(2): 211-214, 2018 06.
Artículo en Inglés | MEDLINE | ID: mdl-29576403

RESUMEN

INTRODUCTION: In 2014, the Wilderness Medical Society (WMS) published guidelines for the treatment of acute pain in remote settings. We surveyed wilderness medicine providers on self-reported analgesia prescribing practices. METHODS: We conducted a prospective, anonymous survey. Respondents were recruited from the WMS annual symposium in 2016. All willing attendees were included. RESULTS: During the symposium, we collected a total of 124 surveys (68% response rate). Respondent age was 42±12 (24-79) years (mean±SD with range), 58% were male, and 69% reported physician-level training. All respondents had medical training of varying levels. Of the physicians reporting a specialty, emergency medicine (59%, n=51), family medicine (13%, n=11), and internal medicine (8%, n=7) were reported most frequently. Eighty-one (65%) respondents indicated they prefer a standardized pain assessment tool, with the 10-point numerical rating scale being the most common (54%, n=67). Most participants reported preferring oral acetaminophen (81%, n=101) or nonsteroidal anti-inflammatory drugs (NSAID) (91%, n=113). Of those preferring NSAID, most reported administering acetaminophen as an adjunct (82%, n=101). Ibuprofen was the most frequently cited NSAID (71%, n=88). Of respondents who preferred opioids, the most frequently preferred opioid was oxycodone (26%, n=32); a lower proportion of respondents reported preferring oral transmucosal fentanyl citrate (9%, n=11). Twenty-five (20%, n=25) respondents preferred ketamine. CONCLUSIONS: Wilderness medicine practitioners prefer analgesic agents recommended by the WMS for the treatment of acute pain. Respondents most frequently preferred acetaminophen and NSAIDs.


Asunto(s)
Analgesia/métodos , Manejo del Dolor/métodos , Medicina Silvestre/métodos , Adulto , Anciano , Analgesia/estadística & datos numéricos , Femenino , Humanos , Masculino , Persona de Mediana Edad , Manejo del Dolor/estadística & datos numéricos , Estudios Prospectivos , Autoinforme , Medicina Silvestre/estadística & datos numéricos
6.
Prehosp Disaster Med ; 33(2): 127-132, 2018 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-29455698

RESUMEN

BACKGROUND: The "Stop the Bleed" campaign advocates for non-medical personnel to be trained in basic hemorrhage control. However, it is not clear what type of education or the duration of instruction needed to meet that requirement. The objective of this study was to determine the impact of a brief hemorrhage control educational curriculum on the willingness of laypersons to respond during a traumatic emergency. METHODS: This "Stop the Bleed" education initiative was conducted by the University of Texas Health San Antonio Office of the Medical Director (San Antonio, Texas USA) between September 2016 and March 2017. Individuals with formal medical certification were excluded from this analysis. Trainers used a pre-event questionnaire to assess participants knowledge and attitudes about tourniquets and responding to traumatic emergencies. Each training course included an individual evaluation of tourniquet placement, 20 minutes of didactic instruction on hemorrhage control techniques, and hands-on instruction with tourniquet application on both adult and child mannequins. The primary outcome in this study was the willingness to use a tourniquet in response to a traumatic medical emergency. RESULTS: Of 236 participants, 218 met the eligibility criteria. When initially asked if they would use a tourniquet in real life, 64.2% (140/218) responded "Yes." Following training, 95.6% (194/203) of participants responded that they would use a tourniquet in real life. When participants were asked about their comfort level with using a tourniquet in real life, there was a statistically significant improvement between their initial response and their response post training (2.5 versus 4.0, based on 5-point Likert scale; P<.001). CONCLUSION: In this hemorrhage control education study, it was found that a short educational intervention can improve laypersons' self-efficacy and reported willingness to use a tourniquet in an emergency. Identified barriers to act should be addressed when designing future hemorrhage control public health education campaigns. Community education should continue to be a priority of the "Stop the Bleed" campaign. Ross EM , Redman TT , Mapp JG , Brown DJ , Tanaka K , Cooley CW , Kharod CU , Wampler DA . Stop the bleed: the effect of hemorrhage control education on laypersons' willingness to respond during a traumatic medical emergency. Prehosp Disaster Med. 2018;33(2):127-132.


Asunto(s)
Hemorragia/terapia , Torniquetes , Voluntarios , Adulto , Evaluación Educacional , Tratamiento de Urgencia , Femenino , Humanos , Masculino , Encuestas y Cuestionarios , Texas
8.
Am J Emerg Med ; 36(6): 942-948, 2018 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-29208322

RESUMEN

BACKGROUND: Nasal cannula can achieve apneic oxygenation during emergency intubation. However, pre-procedure nasal cannula placement may be difficult in patients undergoing non-invasive positive pressure ventilation (NPPV) prior to intubation. Our objective was to compare mask leak during NPPV with versus without simultaneous application of nasal cannula. We hypothesized mask leak would be no worse with concomitant use of nasal cannula (non-inferiority design). METHODS: We performed a randomized crossover non-inferiority study of healthy volunteers. We randomized subjects undergoing 60s trials of NPPV (10cmH2O continuous positive airway pressure) to either NPPV alone (NPPV-a) or NPPV with nasal cannula at 15L/min (NPPV-nc). After a brief rest period, all subjects underwent the alternative intervention. The primary outcome was time averaged mask leak over 60s (L/min). We defined a non-inferiority margin of 5L/min. RESULTS: We enrolled 64 subjects. Mean time-averaged mask leak was 2.2L/min for NPPV-a versus 4.0L/min for NPPV-nc for a difference of 1.7L/min (one-sided 95% CI -∞ to 3.2L/min). NPPV-a resulted in higher mean minute volume received (13.5 versus 12.2L) and higher mean respiratory rates (14.8 versus 13.5 breaths per minute). CONCLUSION: The addition of nasal cannula during NPPV does not significantly increase mask leak. The simultaneous application of nasal cannula with NPPV may be a useful strategy to streamline airway management among patients undergoing NPPV prior to intubation.


Asunto(s)
Cánula/efectos adversos , Ventilación no Invasiva/instrumentación , Respiración con Presión Positiva/instrumentación , Insuficiencia Respiratoria/terapia , Adulto , Estudios Cruzados , Falla de Equipo , Femenino , Voluntarios Sanos , Humanos , Masculino , Nariz , Resultado del Tratamiento
9.
J Emerg Med ; 54(3): 307-314, 2018 03.
Artículo en Inglés | MEDLINE | ID: mdl-29239763

RESUMEN

BACKGROUND: The "Stop the Bleed" campaign in the United States advocates for nonmedical personnel to be trained in basic hemorrhage control and that "bleeding control kits" be available in high-risk areas. However, it is not clear which tourniquets are most effective in the hands of laypersons. OBJECTIVES: The objective of this pilot study was to determine which tourniquet type was the most intuitive for a layperson to apply correctly. METHODS: This project is a randomized study derived from a "Stop the Bleed" education initiative conducted between September 2016 and March 2017. Novice tourniquet users were randomized to apply one of three commercially available tourniquets (Combat Action Tourniquet [CAT; North American Rescue, LLC, Greer, SC], Ratcheting Medical Tourniquet [RMT; m2 Inc., Winooski, VT], or Stretch Wrap and Tuck Tourniquet [SWAT-T; TEMS Solutions, LLC, Salida, CO]) in a controlled setting. Individuals with formal medical certification, prior military service, or prior training with tourniquets were excluded. The primary outcome of this study was successful tourniquet placement. RESULTS: Of 236 possible participants, 198 met the eligibility criteria. Demographics were similar across groups. The rates of successful tourniquet application for the CAT, RMT, and SWAT-T were 16.9%, 23.4%, and 10.6%, respectively (p = 0.149). The most common causes of application failure were: inadequate tightness (74.1%), improper placement technique (44.4%), and incorrect positioning (16.7%). CONCLUSION: Our pilot study on the intuitive nature of applying commercially available tourniquets found unacceptably high rates of failure. Large-scale community education efforts and manufacturer improvements of tourniquet usability by the lay public must be made before the widespread dissemination of tourniquets will have a significant public health effect.


Asunto(s)
Hemorragia/terapia , Torniquetes/normas , Adulto , Femenino , Hemorragia/complicaciones , Hemorragia/prevención & control , Humanos , Masculino , Maniquíes , Proyectos Piloto , Estudios Prospectivos , Salud Pública/instrumentación , Salud Pública/métodos , Estadísticas no Paramétricas , Texas , Factores de Tiempo
10.
Euro Surveill ; 22(9)2017 Mar 02.
Artículo en Inglés | MEDLINE | ID: mdl-28277220

RESUMEN

Multilocus variable-number tandem repeat analysis (MLVA) is a rapid and reproducible typing method that is an important tool for investigation, as well as detection, of national and multinational outbreaks of a range of food-borne pathogens. Salmonella enterica serovar Enteritidis is the most common Salmonella serovar associated with human salmonellosis in the European Union/European Economic Area and North America. Fourteen laboratories from 13 countries in Europe and North America participated in a validation study for MLVA of S. Enteritidis targeting five loci. Following normalisation of fragment sizes using a set of reference strains, a blinded set of 24 strains with known allele sizes was analysed by each participant. The S. Enteritidis 5-loci MLVA protocol was shown to produce internationally comparable results as more than 90% of the participants reported less than 5% discrepant MLVA profiles. All 14 participating laboratories performed well, even those where experience with this typing method was limited. The raw fragment length data were consistent throughout, and the inter-laboratory validation helped to standardise the conversion of raw data to repeat numbers with at least two countries updating their internal procedures. However, differences in assigned MLVA profiles remain between well-established protocols and should be taken into account when exchanging data.


Asunto(s)
Laboratorios/estadística & datos numéricos , Tipificación Molecular/métodos , Tipificación de Secuencias Multilocus/métodos , Infecciones por Salmonella/microbiología , Salmonella enteritidis/genética , Salmonella enteritidis/aislamiento & purificación , Secuencias Repetidas en Tándem/genética , China/epidemiología , Brotes de Enfermedades , Estudios Epidemiológicos , Europa (Continente)/epidemiología , Humanos , Repeticiones de Minisatélite , Tipificación de Secuencias Multilocus/instrumentación , Tipificación de Secuencias Multilocus/normas , Filogenia , Valor Predictivo de las Pruebas , Vigilancia en Salud Pública/métodos , Reproducibilidad de los Resultados , Intoxicación Alimentaria por Salmonella/epidemiología , Infecciones por Salmonella/epidemiología , Salmonella enteritidis/clasificación
11.
Anaerobe ; 37: 49-53, 2016 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-26708405

RESUMEN

Surveillance of Clostridium difficile infection (CDI) in Scotland does not currently distinguish between CDI cases from hospitals and the community. Therefore, the incidence of CDI in the community is unknown, and the burden of disease and the relationship with the hospital/healthcare setting is not well understood. A one-year sentinel community surveillance programme was initiated in collaboration with five Scottish health boards in 2013 (representing 36% of all CDI cases reported in Scotland). Inclusion criteria were all cases aged ≥15 years with a CDI diagnosis in the community or within 48 h following admission to hospital. CDI cases were categorised according to definitions used by the European Centre for Disease Prevention and Control. 256 CDI cases met the inclusion criteria, of which 158 (62%) were community-associated cases (CA-CDI). This represented 26% of all cases reported during the surveillance period by the participating health boards (n = 614). The overall CA-CDI incidence rate was 9.9 per 100 000 population per year. CA-CDI cases were more likely to be female and younger, compared to hospital acquired cases (HA-CDI). The total proportion of cases that had onset in the community was 27%. Ribotypes 015, 002, 078 and 005 were the most common types isolated from both CA-CDI and HA-CDI cases. There were no statistically significant differences between the proportion of types that were either CA-CDI or HA-CDI. Of the CA-CDI cases, 37% had not received antibiotics in the 12 weeks preceding CDI diagnosis, 4% were resident in care homes, and the case-fatality rate for CA-CDI cases was 5.6% (with a 30-day mortality rate for CA-CDI of 0.44 per 100 000 population per year). This study has shown that a substantial proportion of CDI cases reported in Scotland are community associated and that there are close links between the community and healthcare settings. It is therefore essential to monitor the trends in CDI in the community at a national level. The study also provides evidence for the need to examine the feasibility for development of interventions to reduce the burden in the community in addition to hospitals.


Asunto(s)
Clostridioides difficile , Infecciones por Clostridium/epidemiología , Adulto , Anciano , Anciano de 80 o más Años , Servicios de Salud Comunitaria , Femenino , Humanos , Masculino , Persona de Mediana Edad , Escocia/epidemiología , Vigilancia de Guardia
12.
Zookeys ; (330): 1-26, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24146553

RESUMEN

A description is provided of Longidorus cholevae sp. n., a bisexual species associated with wild cherry (Prunus avium L.) from the Rila Mountains, Bulgaria. The position of L. cholevae sp. n. among other species of the genus was elucidated by using morphological and molecular data. Phylogenetic analyses were performed of D2-D3 expansion domains of the 28S rRNA and the partial ITS1 containing regions by Neighbor-Joining, Maximum Likelihood and Bayesian Inference methods. The species is characterised by a female body length of 6.1-8.1 mm; long odontostyle (106-129 µm); lip region wide (21.5-24 µm) rounded and continuous with the body profile; amphidial pouches short and wide, funnel-shaped; a posteriorly situated guide ring (30-37 µm); normal arrangement of pharyngeal glands, and short bluntly rounded to hemispherical tail. Four juvenile stages indentified, first stage with elongate conoid tail. Males with 2-4 adanal pairs and a row of 11-13 single ventromedian supplements, spicules 96-120 µm long. Based both on morphological and molecular data the new species appearred to be the most similar witha group of species distributed in Europe sharing common charcters such as amphidial fovea, lip region and tail shapes, and having similar odontostyle and body length: L. poessneckensis, L. caespiticola, L. macrososma, L. helveticus, L. carniolensis and L. pius. An updated list of Longidorus species and a partial polytomous keys to the Longidorus species with long odontostyle (code A45) and short tail (code H1) are provided.

13.
J Clin Microbiol ; 51(1): 303-5, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23115259

RESUMEN

The current Shigella sonnei pandemic involves geographically associated, multidrug-resistant clones. This study has demonstrated that S. sonnei phylogeny can be accurately defined with limited single nucleotide polymorphisms (SNPs). By typing 6 informative SNPs using a high-resolution melting (HRM) assay, major S. sonnei lineages/sublineages can be identified as defined by whole-genome variation.


Asunto(s)
Técnicas de Tipificación Bacteriana/métodos , Tipificación Molecular/métodos , Filogenia , Polimorfismo de Nucleótido Simple , Shigella sonnei/clasificación , Shigella sonnei/genética , Disentería Bacilar/epidemiología , Disentería Bacilar/microbiología , Salud Global , Humanos , Epidemiología Molecular/métodos , Pandemias , Shigella sonnei/aislamiento & purificación , Temperatura de Transición
14.
Appl Environ Microbiol ; 78(24): 8829-33, 2012 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-23042176

RESUMEN

According to pulsed-field gel electrophoresis (PFGE) typing, 4,12:a:- Salmonella enterica isolates from harbor porpoises are highly diverse. However, porpoise isolates belong to only two multilocus sequence types within the eBurst group 18 (eBG18) genetic cluster, which also includes S. enterica serovars Bispebjerg and Abortusequi. Isolates of other, serologically similar serovars belong to unrelated eBGs. These assignments to eBGs were supported by eBG-specific sequences of the flagellar gene fliC.


Asunto(s)
Biota , Phocoena/microbiología , Salmonelosis Animal/microbiología , Salmonella enterica/clasificación , Salmonella enterica/genética , Animales , Electroforesis en Gel de Campo Pulsado , Flagelina/genética , Genotipo , Tipificación de Secuencias Multilocus , Salmonella enterica/aislamiento & purificación , Serotipificación
15.
Nat Genet ; 44(9): 1056-9, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22863732

RESUMEN

Shigella are human-adapted Escherichia coli that have gained the ability to invade the human gut mucosa and cause dysentery(1,2), spreading efficiently via low-dose fecal-oral transmission(3,4). Historically, S. sonnei has been predominantly responsible for dysentery in developed countries but is now emerging as a problem in the developing world, seeming to replace the more diverse Shigella flexneri in areas undergoing economic development and improvements in water quality(4-6). Classical approaches have shown that S. sonnei is genetically conserved and clonal(7). We report here whole-genome sequencing of 132 globally distributed isolates. Our phylogenetic analysis shows that the current S. sonnei population descends from a common ancestor that existed less than 500 years ago and that diversified into several distinct lineages with unique characteristics. Our analysis suggests that the majority of this diversification occurred in Europe and was followed by more recent establishment of local pathogen populations on other continents, predominantly due to the pandemic spread of a single, rapidly evolving, multidrug-resistant lineage.


Asunto(s)
Transmisión de Enfermedad Infecciosa/estadística & datos numéricos , Disentería Bacilar/microbiología , Disentería Bacilar/transmisión , Genoma Bacteriano , Shigella sonnei/genética , Análisis por Conglomerados , Disentería Bacilar/epidemiología , Disentería Bacilar/genética , Europa (Continente)/epidemiología , Genes Bacterianos/genética , Genoma Bacteriano/genética , Humanos , Datos de Secuencia Molecular , Filogenia , Análisis de Secuencia de ADN , Shigella sonnei/clasificación , Microbiología del Agua , Calidad del Agua
16.
Proc Biol Sci ; 279(1733): 1630-9, 2012 Apr 22.
Artículo en Inglés | MEDLINE | ID: mdl-22090389

RESUMEN

We examined long-term surveillance data on antimicrobial resistance (AMR) in Salmonella Typhimurium DT104 (DT104) isolates from concurrently sampled and sympatric human and animal populations in Scotland. Using novel ecological and epidemiological approaches to examine diversity, and phenotypic and temporal relatedness of the resistance profiles, we assessed the more probable source of resistance of these two populations. The ecological diversity of AMR phenotypes was significantly greater in human isolates than in animal isolates, at the resolution of both sample and population. Of 5200 isolates, there were 65 resistance phenotypes, 13 unique to animals, 30 unique to humans and 22 were common to both. Of these 22, 11 were identified first in the human isolates, whereas only five were identified first in the animal isolates. We conclude that, while ecologically connected, animals and humans have distinguishable DT104 communities, differing in prevalence, linkage and diversity. Furthermore, we infer that the sympatric animal population is unlikely to be the major source of resistance diversity for humans. This suggests that current policy emphasis on restricting antimicrobial use in domestic animals may be overly simplistic. While these conclusions pertain to DT104 in Scotland, this approach could be applied to AMR in other bacteria-host ecosystems.


Asunto(s)
Antiinfecciosos/farmacología , Farmacorresistencia Bacteriana , Salmonella typhimurium/efectos de los fármacos , Animales , Humanos , Pruebas de Sensibilidad Microbiana , Fenotipo , Salmonella typhimurium/aislamiento & purificación , Escocia/epidemiología
17.
PLoS One ; 6(11): e27220, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-22125606

RESUMEN

Throughout the 1990 s, there was an epidemic of multidrug resistant Salmonella Typhimurium DT104 in both animals and humans in Scotland. The use of antimicrobials in agriculture is often cited as a major source of antimicrobial resistance in pathogenic bacteria of humans, suggesting that DT104 in animals and humans should demonstrate similar prevalences of resistance determinants. Until very recently, only the application of molecular methods would allow such a comparison and our understanding has been hindered by the fact that surveillance data are primarily phenotypic in nature. Here, using large scale surveillance datasets and a novel Bayesian approach, we infer and compare the prevalence of Salmonella Genomic Island 1 (SGI1), SGI1 variants, and resistance determinants independent of SGI1 in animal and human DT104 isolates from such phenotypic data. We demonstrate differences in the prevalences of SGI1, SGI1-B, SGI1-C, absence of SGI1, and tetracycline resistance determinants independent of SGI1 between these human and animal populations, a finding that challenges established tenets that DT104 in domestic animals and humans are from the same well-mixed microbial population.


Asunto(s)
Teorema de Bayes , Farmacorresistencia Bacteriana Múltiple/genética , Islas Genómicas/genética , Salmonella typhimurium/genética , Animales , Antibacterianos/farmacología , Frecuencia de los Genes , Variación Genética , Humanos , Cadenas de Markov , Método de Montecarlo , Infecciones por Salmonella/microbiología , Salmonelosis Animal/microbiología , Salmonella typhimurium/clasificación , Salmonella typhimurium/efectos de los fármacos , Especificidad de la Especie
18.
Int J Food Microbiol ; 151(2): 201-9, 2011 Dec 02.
Artículo en Inglés | MEDLINE | ID: mdl-21940060

RESUMEN

In order to improve the knowledge about the presence of Salmonella in pork meat in Sardinia (Italy), the prevalence and the sources of Salmonella at 5 pig slaughterhouses (slaughtered pigs and environment) were investigated and the isolates were characterised. A total of 462 samples were collected, 425 from pigs at slaughter and 41 from the slaughterhouse environment. Salmonella was isolated from 26/85 (30.5%) mesenteric lymph nodes, 14/85 (16.4%) colon contents, and from 12/85 (14.1%) carcasses and livers. Salmonella prevalence was 38% (8/21) in samples from surfaces not in contact with meat, and 35% (7/20) in those from surfaces in contact with meat. Thirty-one pigs were identified as carriers of Salmonella in lymph nodes and/or colon content, but of these, only 8 carcasses were positive. A total of 103 Salmonella isolates were serotyped and genotyped. Eight different serotypes were detected; the most common were S. Derby (44/103, 42.7%) and S. Typhimurium (24/103, 23.3%). The most prevalent S. Typhimurium phage type was DT193. Thirty-two isolates were found to be resistant to more than one antimicrobial (MDR). Pulse-field gel electrophoresis (PFGE) permitted the resolution of XbaI macrorestriction fragments of the Salmonella strains into 20 distinct pulsotypes. Combined application of a plasmid profiling assay (PPA) and PFGE gave useful additional information to assist in tracing the routes of Salmonella contamination in abattoirs. To reduce Salmonella prevalence some preventive measures should be encouraged: the origin of infected slaughter animals should be identified and direct and cross-contamination of carcasses should be avoided by adhering to HACCP principles in association with good hygiene procedures (GHP).


Asunto(s)
Mataderos , Contaminación de Alimentos/análisis , Carne/microbiología , Salmonella enterica/clasificación , Animales , Tipificación de Bacteriófagos , Farmacorresistencia Bacteriana Múltiple , Electroforesis en Gel de Campo Pulsado , Contaminación de Alimentos/prevención & control , Genotipo , Integrones , Italia/epidemiología , Pruebas de Sensibilidad Microbiana , Plásmidos , Prevalencia , Salmonelosis Animal/epidemiología , Salmonelosis Animal/microbiología , Salmonella enterica/efectos de los fármacos , Salmonella enterica/genética , Salmonella enterica/aislamiento & purificación , Serotipificación , Porcinos/microbiología , Enfermedades de los Porcinos/epidemiología , Enfermedades de los Porcinos/microbiología
19.
J Infect ; 62(4): 271-9, 2011 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-21300104

RESUMEN

The objective of this study was to characterise the epidemiology of Clostridium difficile in Scotland by determining the distribution of PCR ribotypes and antimicrobial susceptibility in 1613 isolates collected from all healthboard areas of Scotland in the period November 2007-December 2009. Three PCR ribotypes predominated amongst the Scottish isolates of C. difficile; ribotype 106 (29.4%), ribotype 001 (22%) and ribotype 027 (12.6%) followed by the less prevalent ribotypes including 002, 015, 014, 078, 005, 023 and 020. The distribution of ribotypes varied between healthboard areas. Ribotype 106 or 001 was the predominant ribotype in 10 healthboard areas, while ribotype 027 was the predominant type in two neighbouring areas. Antimicrobial susceptibility testing of C. difficile isolates showed high frequencies of resistance to moxifloxacin, levofloxacin, erythromycin and cefotaxime in the epidemic C. difficile ribotypes 001, 027 and 106 compared to other less common ribotypes. Furthermore, reduced susceptibility to metronidazole was found only in the epidemic strains. These findings are compatible with the hypothesis that fluoroquinolones, macrolides and cephalosporins may play a role in the spread of C. difficile in Scotland (while the role of metronidazole needs further investigations), and highlights the role of antimicrobial stewardship in preventing and controlling C. difficile infection (CDI).


Asunto(s)
Antibacterianos/farmacología , Clostridioides difficile/efectos de los fármacos , Clostridioides difficile/genética , Enterocolitis Seudomembranosa/epidemiología , Anciano , Técnicas de Tipificación Bacteriana , Clostridioides difficile/clasificación , Clostridioides difficile/aislamiento & purificación , Farmacorresistencia Bacteriana , Enterocolitis Seudomembranosa/microbiología , Epidemias , Humanos , Pruebas de Sensibilidad Microbiana , Reacción en Cadena de la Polimerasa , Ribotipificación , Escocia/epidemiología
20.
Environ Microbiol ; 13(5): 1299-308, 2011 May.
Artículo en Inglés | MEDLINE | ID: mdl-21349136

RESUMEN

The number of outbreaks and illness linked to the consumption of contaminated salad leaves have increased dramatically in the last decade. Escherichia coli and Salmonella enterica are the most common food-borne pathogens linked to consumption of fresh produce. Different serovars of S. enterica subspecies enterica have been shown to bind the surface of salad leaves, to exhibit tropism towards the stomata and to invade leaves and reach the underlying mesophyll. However the consequences of leaf invasion are not known. Here we show that following infiltration, serovars Typhimurium, Enteritidis, Heidelberg and Agona, as well as strains of S. enterica subspecies arizonae and diarizonae, survive in the mesophyll of Arabidopsis thaliana leaves but induce neither leaf chlorosis nor wilting. In contrast, S. Senftenberg induced strong leaf wilting 4 days post infiltration in A. thaliana accession Col-0 but not in accession Ws-0. Dead S. Senftenberg and bacterial lysates also induced leaf wilting. We found that mutations in the Arabidopsis pathogen associated molecular pattern (PAMP) recognition receptors (PRRs) FLS2, which recognizes flagellin, and EFR, which recognizes the bacterial elongation factor EF-Tu, had no effect on the wilting response of A. thaliana to S. Senftenberg. Infiltration of A. thaliana leaves with serovars Cannstatt, Krefeld and Liverpool, which like Senftenberg belong to Salmonella serogroup E(4) (O:1,3,19), also resulted in rapid leaf wilting, while all tested rough S. Senftenberg strains (lacking the O antigen) failed to elicit leaf wilting. These results suggest that the Salmonella O antigen 1,3,19 specifically triggers leaf chlorosis and wilting in A. thaliana.


Asunto(s)
Arabidopsis/microbiología , Hojas de la Planta/microbiología , Salmonella enterica/clasificación , Salmonella enterica/patogenicidad , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Flagelina/metabolismo , Variación Genética , Antígenos O/metabolismo , Factor Tu de Elongación Peptídica/metabolismo , Enfermedades de las Plantas/microbiología , Proteínas Quinasas/genética , Receptores de Reconocimiento de Patrones/genética , Salmonella enterica/genética
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