Your browser doesn't support javascript.
loading
: 20 | 50 | 100
1 - 20 de 112
1.
Oper Dent ; 41(3): E83-92, 2016.
Article En | MEDLINE | ID: mdl-26918929

The present study determined the mechanical properties and impact-sliding wear characteristics of self-adhesive resin cements. Five self-adhesive resin cements were used: G-CEM LinkAce, BeautiCem SA, Maxcem Elite, Clearfil SA Automix, and RelyX Unicem 2. Clearfil Esthetic Cement was employed as a control material. Six specimens for each resin cement were used to determine flexural strength, elastic modulus, and resilience according to ISO specification #4049. Ten specimens for each resin cement were used to determine the wear characteristics using an impact-sliding wear testing apparatus. Wear was generated using a stainless-steel ball bearing mounted inside a collet assembly. The maximum facet depth and volume loss were determined using a noncontact profilometer in combination with confocal laser scanning microscopy. Data were evaluated using analysis of variance followed by the Tukey honestly significantly different test (α=0.05). The flexural strength of the resin cements ranged from 68.4 to 144.2 MPa; the elastic modulus ranged from 4.4 to 10.6 GPa; and the resilience ranged from 4.5 to 12.0 MJ/m(3). The results for the maximum facet depth ranged from 25.2 to 235.9 µm, and volume loss ranged from 0.0107 to 0.5258 mm(3). The flexural properties and wear resistance were found to vary depending upon the self-adhesive resin cement tested. The self-adhesive cements tended to have lower mechanical properties than the conventional resin cement. All self-adhesive resin cements, apart from G-CEM LinkAce, demonstrated significantly poorer wear resistance than did the conventional resin cement.


Composite Resins , Dental Cements , Resin Cements , Humans , Materials Testing , Stress, Mechanical
2.
Oper Dent ; 40(1): 87-95, 2015.
Article En | MEDLINE | ID: mdl-24809538

OBJECTIVE: We examined the influence of light intensity on surface free energy characteristics and dentin bond strength of dual-cure direct core build-up resin systems. METHODS: Two commercially available dual-cure direct core build-up resin systems, Clearfil DC Core Automix with Clearfil Bond SE One and UniFil Core EM with Self-Etching Bond, were studied. Bovine mandibular incisors were mounted in acrylic resin and the facial dentin surfaces were wet ground on 600-grit silicon carbide paper. Adhesives were applied to dentin surfaces and cured with light intensities of 0 (no irradiation), 200, 400, and 600 mW/cm(2). The surface free energy of the adhesives (five samples per group) was determined by measuring the contact angles of three test liquids placed on the cured adhesives. To determine the strength of the dentin bond, the core build-up resin pastes were condensed into the mold on the adhesive-treated dentin surfaces according to the methods described for the surface free energy measurement. The resin pastes were cured with the same light intensities as those used for the adhesives. Ten specimens per group were stored in water maintained at 37°C for 24 hours, after which they were shear tested at a crosshead speed of 1.0 mm/minute in a universal testing machine. Two-way analysis of variance (ANOVA) and a Tukey-Kramer test were performed, with the significance level set at 0.05. RESULTS: The surface free energies of the adhesive-treated dentin surfaces decreased with an increase in the light intensity of the curing unit. Two-way ANOVA revealed that the type of core build-up system and the light intensity significantly influence the bond strength, although there was no significant interaction between the two factors. The highest bond strengths were achieved when the resin pastes were cured with the strongest light intensity for all the core build-up systems. When polymerized with a light intensity of 200 mW/cm(2) or less, significantly lower bond strengths were observed. CONClUSIONS: The data suggest that the dentin bond strength of core build-up systems are still affected by the light intensity of the curing unit, which is based on the surface free energy of the adhesives. On the basis of the results and limitations of the test conditions used in this study, it appears that a light intensity of >400 mW/cm(2) may be required for achieving the optimal dentin bond strength.


Dentin-Bonding Agents/radiation effects , Light , Resins, Synthetic/radiation effects , Animals , Cattle , Composite Resins/radiation effects , Composite Resins/therapeutic use , Curing Lights, Dental , Dental Bonding/methods , Dental Stress Analysis , Dentin/ultrastructure , Dentin-Bonding Agents/therapeutic use , Microscopy, Electron, Scanning , Resin Cements/radiation effects , Resin Cements/therapeutic use , Resins, Synthetic/therapeutic use , Surface Properties
3.
Plant Biol (Stuttg) ; 16 Suppl 1: 18-22, 2014 Jan.
Article En | MEDLINE | ID: mdl-24016318

Mechanosensitive (MS) channels are expressed in a variety of cells. The molecular and biophysical mechanism involved in the regulation of MS channel activities is a central interest in basic biology. MS channels are thought to play crucial roles in gravity sensing in plant cells. To date, two mechanisms have been proposed for MS channel activation. One is that tension development in the lipid bilayer directly activates MS channels. The second mechanism proposes that the cytoskeleton is involved in the channel activation, because MS channel activities are modulated by pharmacological treatments that affect the cytoskeleton. We tested whether tension in the cytoskeleton activates MS channels. Mammalian endothelial cells were microinjected with phalloidin-conjugated beads, which bound to stress fibres, and a traction force to the actin cytoskeleton was applied by dragging the beads with optical tweezers. MS channels were activated when the force was applied, demonstrating that a sub-pN force to the actin filaments activates a single MS channel. Plants may use a similar molecular mechanism in gravity sensing, since the cytoplasmic Ca(2+) concentration increase induced by changes in the gravity vector was attenuated by potential MS channel inhibitors, and by actin-disrupting drugs. These results support the idea that the tension increase in actin filaments by gravity-dependent sedimentation of amyloplasts activates MS Ca(2+) -permeable channels, which can be the molecular mechanism of a Ca(2+) concentration increase through gravistimulation. We review recent progress in the study of tension sensing by actin filaments and MS channels using advanced biophysical methods, and discuss their possible roles in gravisensing.


Actins/metabolism , Gravity Sensing , Ion Channels/metabolism , Mechanotransduction, Cellular , Plants/metabolism , Stress Fibers/metabolism , Stress, Physiological
4.
Plant Biol (Stuttg) ; 16 Suppl 1: 39-42, 2014 Jan.
Article En | MEDLINE | ID: mdl-23731064

The mechano-sensitive channels of plants may sense increases in tension induced by mechanical stimuli, such as touch, wind and turgor pressure, and a gravitational stimulus. Recent studies have identified plant homologues of the bacterial mechano-sensitive channel MscS, which is gated by membrane tension and reduces intracellular osmolality by releasing small osmolytes from bacterial cells. However, the physiological roles of these homologues have not yet been clearly elucidated, and only two of them have been shown to be involved in the protection of osmotically stressed plastids in Arabidopsis thaliana. We identified another group of candidates for mechano-sensitive channels in Arabidopsis, named MCA1 and MCA2, whose homologues are exclusively found in plant genomes. MCA1 and MCA2 are composed of 421 and 416 amino acid residues, respectively, share 73% homology in their amino acid sequences, and are not homologous to any known ion channels or transporters. Our structural study revealed that the N-terminal region (one to 173 amino acids) of both proteins was necessary and sufficient for Ca(2+) influx activity. Interestingly, this region had one putative transmembrane segment containing an Asp residue whose substitution mutation abolished this activity. Our physiological study suggested that MCA1 expressed at the root tip was required for sensing the hardness of the agar medium or soil. In addition, MCA1 and MCA2 were shown to be responsible for hypo-osmotic shock-induced increases in [Ca(2+) ]cyt . Thus, both proteins appear to be involved in the process of sensing mechanical stresses. We discussed the possible role of both proteins in sensing mechanical and gravitational stimuli.


Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Gravity Sensing , Ion Channels/metabolism , Mechanotransduction, Cellular , Arabidopsis Proteins/chemistry , Ion Channels/chemistry , Multigene Family
5.
J Exp Bot ; 62(1): 9-20, 2011 Jan.
Article En | MEDLINE | ID: mdl-20847099

Acid soils restrict plant production around the world. One of the major limitations to plant growth on acid soils is the prevalence of soluble aluminium (Al(3+)) ions which can inhibit root growth at micromolar concentrations. Species that show a natural resistance to Al(3+) toxicity perform better on acid soils. Our understanding of the physiology of Al(3+) resistance in important crop plants has increased greatly over the past 20 years, largely due to the application of genetics and molecular biology. Fourteen genes from seven different species are known to contribute to Al(3+) tolerance and resistance and several additional candidates have been identified. Some of these genes account for genotypic variation within species and others do not. One mechanism of resistance which has now been identified in a range of species relies on the efflux of organic anions such as malate and citrate from roots. The genes controlling this trait are members of the ALMT and MATE families which encode membrane proteins that facilitate organic anion efflux across the plasma membrane. Identification of these and other resistance genes provides opportunities for enhancing the Al(3+) resistance of plants by marker-assisted breeding and through biotechnology. Most attempts to enhance Al(3+) resistance in plants with genetic engineering have targeted genes that are induced by Al(3+) stress or that are likely to increase organic anion efflux. In the latter case, studies have either enhanced organic anion synthesis or increased organic anion transport across the plasma membrane. Recent developments in this area are summarized and the structure-function of the TaALMT1 protein from wheat is discussed.


Aluminum/metabolism , Organic Anion Transporters/genetics , Plant Proteins/genetics , Soil/analysis , Triticum/growth & development , Triticum/metabolism , Gene Expression Regulation, Plant , Organic Anion Transporters/chemistry , Organic Anion Transporters/metabolism , Plant Proteins/chemistry , Plant Proteins/metabolism , Triticum/chemistry , Triticum/genetics
6.
J Med Genet ; 47(10): 704-9, 2010 Oct.
Article En | MEDLINE | ID: mdl-20577006

BACKGROUND: Mutations in TRPV4, a gene that encodes a Ca(2+) permeable non-selective cation channel, have recently been found in a spectrum of skeletal dysplasias that includes brachyolmia, spondylometaphyseal dysplasia, Kozlowski type (SMDK) and metatropic dysplasia (MD). Only a total of seven missense mutations were detected, however. The full spectrum of TRPV4 mutations and their phenotypes remained unclear. OBJECTIVES AND METHODS: To examine TRPV4 mutation spectrum and phenotype-genotype association, we searched for TRPV4 mutations by PCR-direct sequencing from genomic DNA in 22 MD and 20 SMDK probands. RESULTS: TRPV4 mutations were found in all but one MD subject. In total, 19 different heterozygous mutations were identified in 41 subjects; two were recurrent and 17 were novel. In MD, a recurrent P799L mutation was identified in nine subjects, as well as 10 novel mutations including F471del, the first deletion mutation of TRPV4. In SMDK, a recurrent R594H mutation was identified in 12 subjects and seven novel mutations. An association between the position of mutations and the disease phenotype was also observed. Thus, P799 in exon 15 is a hot codon for MD mutations, as four different amino acid substitutions have been observed at this codon; while R594 in exon 11 is a hotspot for SMDK mutations. CONCLUSION: The TRPV4 mutation spectrum in MD and SMDK, which showed genotype-phenotype correlation and potential functional significance of mutations that are non-randomly distributed over the gene, was presented in this study. The results would help diagnostic laboratories establish efficient screening strategies for genetic diagnosis of the TRPV4 dysplasia family diseases.


Mutation , Osteochondrodysplasias/genetics , Osteochondrodysplasias/pathology , TRPV Cation Channels/genetics , DNA Mutational Analysis , Dwarfism/diagnostic imaging , Dwarfism/genetics , Dwarfism/pathology , Genotype , Humans , Mutation, Missense , Osteochondrodysplasias/diagnostic imaging , Phenotype , Polymerase Chain Reaction , Radiography , Sequence Analysis, DNA
7.
J Med Genet ; 46(8): 562-8, 2009 Aug.
Article En | MEDLINE | ID: mdl-19508970

BACKGROUND: Schneckenbecken dysplasia (SBD) is an autosomal recessive lethal skeletal dysplasia that is classified into the severe spondylodysplastic dysplasias (SSDD) group in the international nosology for skeletal dysplasias. The radiological hallmark of SBD is the snail-like configuration of the hypoplastic iliac bone. SLC35D1 (solute carrier-35D1) is a nucleotide-sugar transporter involved in proteoglycan synthesis. Recently, based on human and mouse genetic studies, we showed that loss-of-function mutations of the SLC35D1 gene (SLC35D1) cause SBD. OBJECT: To explore further the range of SLC35D1 mutations in SBD and elucidate whether SLC35D1 mutations cause other skeletal dysplasias that belong to the SSDD group. METHODS AND RESULTS: We searched for SLC35D1 mutations in five families with SBD and 15 patients with other SSDD group diseases, including achodrogenesis type 1A, spondylometaphyseal dysplasia Sedaghatian type and fibrochondrogenesis. We identified four novel mutations, c.319C>T (p.R107X), IVS4+3A>G, a 4959-bp deletion causing the removal of exon 7 (p.R178fsX15), and c.193A>C (p. T65P), in three SBD families. Exon trapping assay showed IVS4+3A>G caused skipping of exon 4 and a frameshift (p.L109fsX18). Yeast complementation assay showed the T65P mutant protein lost the transporter activity of nucleotide sugars. Therefore, all these mutations result in loss of function. No SLC35D1 mutations were identified in all patients with other SSDD group diseases. CONCLUSION: Our findings suggest that SLC35D1 loss-of-function mutations result consistently in SBD and are exclusive to SBD.


Bone Diseases, Developmental/genetics , Fetal Diseases/genetics , Gene Deletion , Monosaccharide Transport Proteins/genetics , Mutation , Base Sequence , Cloning, Molecular , Female , Humans , Male , Molecular Sequence Data , Nucleotides/metabolism , Polymerase Chain Reaction , Pregnancy , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Sequence Alignment
8.
J Environ Manage ; 88(3): 479-95, 2008 Aug.
Article En | MEDLINE | ID: mdl-17467879

The Analytic Network Process (ANP) has been proposed to incorporate interdependence and feedback effect in the prioritization of remedial countermeasures using a hierarchical network decision model, but this approach seems to be incapable of capturing the vagueness and fuzziness during value judgment elicitation. The aim of this paper is to present an evaluation method using a fuzzy ANP (FANP) approach to address this shortcoming. Triangular fuzzy numbers (TFN) and their degree of fuzziness are used in the semantic scale as human judgment expressed in natural language is most often vague and fuzzy. The method employs the alpha-cuts, interval arithmetic and optimism index to transform the fuzzy comparative judgment matrix into set of crisp matrices, and then calculates the desired priorities using the eigenvector method. A numerical example, which was drawn from a real-life case study of an uncontrolled landfill in Japan, is presented to demonstrate the process. Results from the sensitivity analysis describe how the fuzziness in judgment could affect the solution robustness of the prioritization method. The proposed FANP approach therefore could effectively deal with the uncertain judgment inherent in the decision making process and derive the meaningful priorities explicitly from a complex decision structure in the evaluation of contaminated site remedial countermeasures.


Algorithms , Environmental Restoration and Remediation , Fuzzy Logic
9.
Neuroscience ; 148(2): 510-21, 2007 Aug 24.
Article En | MEDLINE | ID: mdl-17651901

Apoptosis-associated tyrosine kinase (AATYK) is a protein kinase that is predominantly expressed in the nervous system and is involved in apoptosis and neurite growth of cerebellar granule cells. In this study, we cloned three new members of the mouse AATYK family, AATYK1B, AATYK2 and AATYK3. AATYK1B is a splicing variant of the previously reported AATYK1 (referred to as AATYK1A hereafter). In comparison with AATYK1A, these three AATYK members were characterized by having an extra N-terminal region that consists of a signal peptide-like sequence and a predicted transmembrane (TM) region, which is followed by a kinase domain and a long C-terminal domain. Both TM-containing AATYK isoforms (AATYK(+)TM: AATYK1B, 2, and 3) and TM-lacking isoform (AATYK(-)TM: AATYK1A) were recovered in membrane fractions, suggesting that AATYK(+)TM and AATYK(-)TM are transmembrane- and peripheral-membrane protein kinases, respectively. AATYK1A was recovered in the soluble fraction when the cells were treated with 2-bromo palmitate, suggesting that AATYK1A associates with membrane via palmitoylation. The kinase domain was highly conserved among all AATYK members and was shown to be catalytically active. Three AATYK family members were predominantly expressed in adult mouse brains with almost similar expression profiles: widespread distribution over the various brain regions, especially in the cerebellum and hippocampus, and up-regulated expression during development of the cerebellum. In cultured cerebellar granule cells, AATYK1 was abundantly localized in both soma and axons, AATYK2 distribution was restricted to soma, and AATYK3 was punctately present over the cells. AATYK1 was concentrated in the central domain of growth cones of dorsal root ganglion neurons. Our results indicate that AATYK family members are brain-dominant and membrane-associated kinases with slightly different distribution patterns in the developing and adult mouse brain, which may be involved in fine regulation of neuronal functions including neurite extension and apoptosis.


Apoptosis Regulatory Proteins/classification , Apoptosis Regulatory Proteins/physiology , Apoptosis/physiology , Neurons/metabolism , Animals , Animals, Newborn , Brain/cytology , Brain/metabolism , Cells, Cultured , Chick Embryo , Cloning, Molecular/methods , Gene Expression Regulation, Enzymologic/genetics , Mice , Phosphotransferases/metabolism , Sequence Alignment/methods , Transfection/methods
10.
Waste Manag ; 26(12): 1410-21, 2006.
Article En | MEDLINE | ID: mdl-16412627

The aim of this paper is to present an evaluation method to aid decision makers in the prioritization and selection of appropriate countermeasures at the planning stage of site remediation. We introduced a hierarchical network (hiernet) decision structure and applied the Analytic Network Process (ANP) supermatrix approach to measure the relative desirability of the remedial alternatives using the decision maker's value judgment as input. A simplified illustrative example is presented to elucidate the process, as it is being applied to evaluate the feasible remedial countermeasures of a contaminated site caused by uncontrolled landfill. Four decision models derived from the generalized hiernet were examined to describe the effect of hierarchic functional dependence, inner dependence and feedback cycle on the derivation of the priority weights. The ANP could provide a more flexible analytical framework to break down one's judgment through a more elaborate structure in a systematic way to understand the complexity of the decision problem. The proposed method therefore may not only aid in selecting the best alternative but also may help to facilitate communication to understand why an alternative is preferred over the other alternatives through the analysis of the derived weights and its underlying decision structure.


Conservation of Natural Resources/methods , Environmental Pollution/prevention & control , Conservation of Natural Resources/economics , Cost-Benefit Analysis/methods , Decision Making , Decision Support Techniques , Environmental Pollution/economics , Hazardous Waste/economics , Hazardous Waste/prevention & control , Humans , Models, Theoretical
11.
Genes Brain Behav ; 5(1): 96-106, 2006 Feb.
Article En | MEDLINE | ID: mdl-16436193

Methods to temporally and spatially regulate gene mutations will provide a powerful strategy to investigate gene function in the brain. To develop these methods, we have established a tightly regulated system for transgene expression in the forebrain using both a tetracycline (Tc)-dependent transcription activator (rtTA) and a repressor (TetR-Kruppel-associated box). In this system, the repressor binds to the Tc-responsive element (TRE) in the absence of doxycycline (Dox), leading to the repression of leaky activation of TRE-mediated transcription caused by weak binding of rtTA to TRE. Upon Dox administration, only the activator binds to TRE and activates transcription. We tested this system in cultured cells by bicistronically expressing both the regulators using an internal ribosome entry site (IRES). In COS-1, HeLa and SHSY5Y cells, leaky transcription activation led by rtTA in the absence of Dox was repressed without decreasing the level of activated transcription in the presence of Dox. Using this system, transgenic mice were produced that express both the regulators using IRES in the forebrain under the control of the alphaCaMKII promoter and were bred with transgenic mice carrying the TRE-dependent reporter transgene. In reverse transcription-polymerase chain reaction and in situ hybridization analyses of the forebrain in adult double transgenic mice, the treatment of Dox induces reporter mRNA expression, which was not detected before the treatment and after the withdraw of Dox following the treatment. These results indicate that this system allows the tight regulation of transgene expression in a Dox-dependent fashion in the forebrain and will be useful in investigating gene function in the brain.


Doxycycline/pharmacology , Gene Expression Regulation/drug effects , Gene Transfer Techniques , Repressor Proteins/drug effects , Response Elements/drug effects , Trans-Activators/drug effects , Animals , COS Cells , Cell Line , Cells, Cultured , Chlorocebus aethiops , Cloning, Molecular/methods , Genes, Reporter/drug effects , Genes, Reporter/genetics , HeLa Cells , Humans , Mice , Mice, Transgenic , Prosencephalon/drug effects , Prosencephalon/metabolism , RNA/analysis , RNA, Messenger/analysis , Repressor Proteins/genetics , Response Elements/genetics , Trans-Activators/genetics
12.
J Cell Biol ; 155(1): 157-66, 2001 Oct 01.
Article En | MEDLINE | ID: mdl-11581292

Targeted disruption of core binding factor alpha1 (Cbfa1) showed that Cbfa1 is an essential transcription factor in osteoblast differentiation and bone formation. Furthermore, both in vitro and in vivo studies showed that Cbfa1 plays important roles in matrix production and mineralization. However, it remains to be clarified how Cbfa1 controls osteoblast differentiation, bone formation, and bone remodelling. To understand fully the physiological functions of Cbfa1, we generated transgenic mice that overexpressed Cbfa1 in osteoblasts using type I collagen promoter. Unexpectedly, Cbfa1 transgenic mice showed osteopenia with multiple fractures. Cortical bone, which was thin, porous, and enriched with osteopontin, was invaded by osteoclasts, despite the absence of acceleration of osteoclastogenesis. Although the number of neonatal osteoblasts was increased, their function was impaired in matrix production and mineralization. Furthermore, terminally differentiated osteoblasts, which strongly express osteocalcin, and osteocytes were diminished greatly, whereas less mature osteoblasts expressing osteopontin accumulated in adult bone. These data indicate that immature organization of cortical bone, which was caused by the maturational blockage of osteoblasts, led to osteopenia and fragility in transgenic mice, demonstrating that Cbfa1 inhibits osteoblast differentiation at a late stage.


Bone Diseases, Metabolic/physiopathology , Bone and Bones/physiology , Neoplasm Proteins , Osteoblasts/physiology , Transcription Factors/metabolism , Animals , Bone Diseases, Metabolic/genetics , Bone and Bones/cytology , Bone and Bones/diagnostic imaging , Collagen/genetics , Collagen/metabolism , Core Binding Factor Alpha 1 Subunit , Core Binding Factors , Female , Fractures, Bone/genetics , Fractures, Bone/physiopathology , Mice , Mice, Transgenic , Osteogenesis , Promoter Regions, Genetic/genetics , Radiography , Transcription Factors/genetics
13.
Plant Cell Physiol ; 42(10): 1149-55, 2001 Oct.
Article En | MEDLINE | ID: mdl-11673631

Using Ca(2+)-dependent photoprotein aequorin-transformed Arabidopsis thaliana, sugar-induced increase in cytosolic free Ca(2+ )concentration ([Ca(2+)](cyt))( )was investigated by luminescence imaging technique. When 0.1 M sucrose was fed to roots of autotrophically grown intact whole plants whose roots had been incubated overnight with coelenterazine to reconstitute aequorin systemically, strong and transient (within 20 s) luminescence was observed in the roots; that luminescence was followed by weak luminescence moving from the lower leaves to the upper leaves. The moving rate of luminescence was roughly comparable to that of [(14)C]sucrose. Application of 0.1 M glucose or fructose induced transient luminescence in excised leaves. No such luminescence was observed in heterotrophically grown (with sucrose) whole plants or in excised tissues. mRNA levels of sucrose-H(+) symporter genes AtSUC1 and AtSUC2 were higher in autotrophic plants than in heterotrophic plants. These results indicate that influx of transported sucrose together with H(+) into the mesophyll cells of autotrophic plants may depolarize the membrane potential, and subsequently activate a voltage-gated Ca(2+) channel on the plasma membrane, resulting in a [Ca(2+)](cyt) increase. The [Ca(2+)](cyt) increase might initiate Ca(2+ )signaling leading to the expression of genes related to biosynthesis of storage carbohydrates. Hexoses, when applied, might also be involved in the [Ca(2+)](cyt) increase mediated by monosaccharide-H(+) co-transporters.


Arabidopsis/metabolism , Calcium/metabolism , Cytosol/drug effects , Sucrose/pharmacology , Biological Transport , Cytosol/metabolism , Gene Expression Regulation, Plant/drug effects , Plant Leaves/metabolism , Plant Roots/metabolism
14.
Plant Cell Physiol ; 42(9): 900-5, 2001 Sep.
Article En | MEDLINE | ID: mdl-11577183

The gene encoding voltage-gated channel with high affinity for Ca(2+) permeation has not been cloned from plants. In the present study, we isolated a full-length cDNA encoding a putative Ca(2+ )channel (AtTPC1) from Arabidopsis. AtTPC1 has two conserved homologous domains, both of which contain six transmembrane segments (S1-S6) and a pore loop (P) between S5 and S6 in each domain, and has the highest homology with the two pore channel TPC1 recently cloned from rat. The overall structure is similar to the half of the general structure of alpha-subunits of voltage-activated Ca(2+) channels from animals. AtTPC1 rescued the Ca(2+) uptake activity of a yeast mutant cch1. Sucrose-induced luminescence, which reflects a cytosolic free Ca(2+) increase in aequorin-expressing Arabidopsis leaves, was enhanced by overexpression of AtTPC1 and suppressed by antisense expression of it. Sucrose-H(+) symporters AtSUC1 and 2, which depolarize membrane potential of cells receiving sucrose, also depressed a Ca(2+) increase by their antisense expression. These results suggest that AtTPC1 mediates a voltage-activated Ca(2+ )influx in Arabidopsis leaf cells.


Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Calcium Channels/metabolism , Calcium/metabolism , Aequorin/metabolism , Amino Acid Sequence , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Base Sequence , Calcium Channels/genetics , DNA, Plant , Gene Expression Regulation, Plant , Membrane Transport Proteins/metabolism , Molecular Sequence Data , Plant Leaves/cytology , Plant Leaves/genetics , Plant Proteins/metabolism
15.
Brain Res Gene Expr Patterns ; 1(1): 39-59, 2001 Aug.
Article En | MEDLINE | ID: mdl-15018818

Before the discovery of DNA microarray and DNA chip technology, the expression of only a small number of genes could be analyzed at a time. Currently, such technology allows us the simultaneous analysis of a large number of genes to systematically monitor their expression patterns that may be associated with various biological phenomena. We utilized the Affymetrix GeneChip Mu11K to analyze the gene expression profile in developing mouse cerebellum to assist in the understanding of the genetic basis of cerebellar development in mice. Our analysis showed 81.6% (10,321/12,654) of the genes represented on the GeneChip were expressed in the postnatal cerebellum, and among those, 8.7% (897/10,321) were differentially expressed with more than a two-fold change in their maximum and minimum expression levels during the developmental time course. Further analysis of the differentially expressed genes that were clustered in terms of their expression patterns and the function of their encoded products revealed an aspect of the genetic foundation that lies beneath the cellular events and neural network formation that takes place during the development of the mouse cerebellum.

18.
J Mol Biol ; 294(2): 467-76, 1999 Nov 26.
Article En | MEDLINE | ID: mdl-10610772

Inositol 1,4,5-trisphosphate (InsP3) activates receptors (InsP3Rs) that mediate intracellular Ca(2+ )release, thereby modulating intracellular calcium signals and regulating important aspects of cellular physiology and gene expression. To further our understanding of InsP3Rs we have characterised InsP3Rs and the InsP3R gene, itr-1, from the model organism Caenorhabditis elegans. cDNAs encoding InsP3Rs were cloned enabling us to: (a) identify three putative transcription start sites that result in alternative mRNA 5' ends: (b) detect alternative splicing at three sites and: (c) determine the full genomic organisation of the itr-1 gene. The InsP3R protein (ITR-1) is approximately 42 % identical with known InsP3Rs and possesses conserved structural features. When the putative InsP3 binding domain was expressed in Escherichia coli, specific binding of InsP3 was detected. Using antibodies against ITR-1 we detected a protein of 220 kDa in C. elegans membranes. These antibodies and itr-1::GFP (green fluorescent protein) reporter constructs were used to determine the expression pattern of itr-1 in C. elegans. Strong expression was observed in the intestine, pharynx, nerve ring, excretory cell and gonad. These results demonstrate the high degree of structural and functional conservation of InsP3Rs from nematodes to mammals and the utility of C. elegans as a system for studies on InsP3R mediated signalling.


Caenorhabditis elegans/genetics , Calcium Channels/genetics , Calcium Channels/metabolism , Helminth Proteins/genetics , Helminth Proteins/metabolism , Receptors, Cytoplasmic and Nuclear/genetics , Receptors, Cytoplasmic and Nuclear/metabolism , Amino Acid Sequence , Animals , Animals, Genetically Modified , Binding Sites , Cell Membrane/genetics , Cell Membrane/metabolism , Conserved Sequence , Gene Expression Profiling , Gonads/metabolism , Inositol 1,4,5-Trisphosphate Receptors , Intestinal Mucosa/metabolism , Molecular Sequence Data , Nervous System/metabolism , Pharynx/metabolism , RNA, Messenger , Rectum/cytology , Rectum/metabolism
19.
J Biol Chem ; 274(48): 34433-7, 1999 Nov 26.
Article En | MEDLINE | ID: mdl-10567423

The inositol 1,4,5-trisphosphate (IP(3)) receptor (IP(3)R), an IP(3)-gated Ca(2+) channel located on intracellular Ca(2+) stores, modulates intracellular Ca(2+) signaling. During apoptosis of the human T-cell line, Jurkat cells, as induced by staurosporine or Fas ligation, IP(3)R type 1 (IP(3)R1) was found to be cleaved. IP(3)R1 degradation during apoptosis was inhibited by pretreatment of Jurkat cells with the caspase-3 (-like protease) inhibitor, Ac-DEVD-CHO, and the caspases inhibitor, z-VAD-CH(2)DCB but not by the caspase-1 (-like protease) inhibitor, Ac-YVAD-CHO, suggesting that IP(3)R1 was cleaved by a caspase-3 (-like) protease. The recombinant caspase-3 cleaved IP(3)R1 in vitro to produce a fragmentation pattern consistent with that seen in Jurkat cells undergoing apoptosis. N-terminal amino acid sequencing revealed that the major cleavage site is (1888)DEVD*(1892)R (mouse IP(3)R1), which involves consensus sequence for caspase-3 cleavage (DEVD). To determine whether IP(3)R1 is cleaved by caspase-3 or is proteolyzed in its absence by other caspases, we examined the cleavage of IP(3)R1 during apoptosis in the MCF-7 breast carcinoma cell line, which has genetically lost caspase-3. Tumor necrosis factor-alpha- or staurosporine-induced apoptosis in caspase-3-deficient MCF-7 cells failed to demonstrate cleavage of IP(3)R1. In contrast, MCF-7/Casp-3 cells stably expressing caspase-3 showed IP(3)R1 degradation upon apoptotic stimuli. Therefore IP(3)R1 is a newly identified caspase-3 substrate, and caspase-3 is essential for the cleavage of IP(3)R1 during apoptosis. This cleavage resulted in a decrease in the channel activity as IP(3)R1 was digested, indicating that caspase-3 inactivates IP(3)R1 channel functions.


Apoptosis , Calcium Channels/metabolism , Caspases/metabolism , Receptors, Cytoplasmic and Nuclear/metabolism , Amino Acid Sequence , Animals , Binding Sites , Calcium/metabolism , Calcium Channels/chemistry , Caspase 3 , Caspases/genetics , Caspases/pharmacology , Humans , Hydrolysis , Inositol 1,4,5-Trisphosphate/pharmacology , Inositol 1,4,5-Trisphosphate Receptors , Jurkat Cells , Mice , Microsomes/drug effects , Microsomes/metabolism , Receptors, Cytoplasmic and Nuclear/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Recombinant Proteins/pharmacology , Substrate Specificity , Tumor Cells, Cultured
20.
J Neurosci ; 19(19): 8389-400, 1999 Oct 01.
Article En | MEDLINE | ID: mdl-10493740

A developmentally regulated Homer/Vesl isoform, Cupidin (Homer 2a/Vesl-2Delta11), was isolated from postnatal mouse cerebellum using a fluorescent differential display strategy. The strongest expression of Cupidin was detected in the cerebellar granule cells at approximately postnatal day 7. Cupidin was enriched in the postsynaptic density fraction, and its immunoreactivity was concentrated at glomeruli of the inner granular layer when active synaptogenesis occurred. Cupidin protein could be divided into two functional domains: the N-terminal portion, which was highly conserved among Homer/Vesl family proteins, and the C-terminal portion, which consisted of a putative coiled-coil structure, including several leucine zipper motifs. The N-terminal fragment of Cupidin, which was able to associate with metabotropic glutamate receptor 1 (mGluR1), also interacted with F-actin in vitro. In keeping with this, F-actin immunocytochemically colocalized with Cupidin in cultured cerebellar granule cells, and a Cupidin-mGluR1-actin complex was immunoprecipitated from crude cerebellar lysates using an anti-Cupidin antibody. On the other hand, the C-terminal portion of Cupidin bound to Cdc42, a member of Rho family small GTPases, in a GTP-dependent manner in vitro, and Cupidin functionally interacted with activated-Cdc42 in a heterologous expression system. Together, our findings indicate that Cupidin may serve as a postsynaptic scaffold protein that links mGluR signaling with actin cytoskeleton and Rho family proteins, perhaps during the dynamic phase of morphological changes that occur during synapse formation in cerebellar granule cells.


Actins/metabolism , Aging/metabolism , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cerebellar Cortex/metabolism , GTP Phosphohydrolases/metabolism , Gene Expression Regulation, Developmental , Neurons/metabolism , Neuropeptides/genetics , Neuropeptides/metabolism , Proteins/metabolism , Transcription, Genetic , Amino Acid Sequence , Animals , Binding Sites , Carrier Proteins/chemistry , Cerebellar Cortex/cytology , Cerebellar Cortex/growth & development , Cloning, Molecular , Conserved Sequence , Cytoskeleton/physiology , GTPase-Activating Proteins , Homer Scaffolding Proteins , Mice , Molecular Sequence Data , Neurons/cytology , Neuropeptides/chemistry , Receptors, Metabotropic Glutamate/metabolism , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/metabolism , Sequence Alignment , Sequence Homology, Amino Acid
...