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1.
Curr Res Toxicol ; 5: 100121, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37701072

RESUMEN

The rise of artificial intelligence (AI) based algorithms has gained a lot of interest in the pharmaceutical development field. Our study demonstrates utilization of traditional machine learning techniques such as random forest (RF), support-vector machine (SVM), extreme gradient boosting (XGBoost), deep neural network (DNN) as well as advanced deep learning techniques like gated recurrent unit-based DNN (GRU-DNN) and graph neural network (GNN), towards predicting human ether-á-go-go related gene (hERG) derived toxicity. Using the largest hERG dataset derived to date, we have utilized 203,853 and 87,366 compounds for training and testing the models, respectively. The results show that GNN, SVM, XGBoost, DNN, RF, and GRU-DNN all performed well, with validation set AUC ROC scores equals 0.96, 0.95, 0.95, 0.94, 0.94 and 0.94, respectively. The GNN was found to be the top performing model based on predictive power and generalizability. The GNN technique is free of any feature engineering steps while having a minimal human intervention. The GNN approach may serve as a basis for comprehensive automation in predictive toxicology. We believe that the models presented here may serve as a promising tool, both for academic institutes as well as pharmaceutical industries, in predicting hERG-liability in new molecular structures.

2.
J Med Chem ; 66(6): 3968-3994, 2023 03 23.
Artículo en Inglés | MEDLINE | ID: mdl-36877255

RESUMEN

A new series of dual low nanomolar benzothiazole inhibitors of bacterial DNA gyrase and topoisomerase IV were developed. The resulting compounds show excellent broad-spectrum antibacterial activities against Gram-positive Enterococcus faecalis, Enterococcus faecium and multidrug resistant (MDR) Staphylococcus aureus strains [best compound minimal inhibitory concentrations (MICs): range, <0.03125-0.25 µg/mL] and against the Gram-negatives Acinetobacter baumannii and Klebsiella pneumoniae (best compound MICs: range, 1-4 µg/mL). Lead compound 7a was identified with favorable solubility and plasma protein binding, good metabolic stability, selectivity for bacterial topoisomerases, and no toxicity issues. The crystal structure of 7a in complex with Pseudomonas aeruginosa GyrB24 revealed its binding mode at the ATP-binding site. Expanded profiling of 7a and 7h showed potent antibacterial activity against over 100 MDR and non-MDR strains of A. baumannii and several other Gram-positive and Gram-negative strains. Ultimately, in vivo efficacy of 7a in a mouse model of vancomycin-intermediate S. aureus thigh infection was also demonstrated.


Asunto(s)
Staphylococcus aureus , Staphylococcus aureus Resistente a Vancomicina , Animales , Ratones , Staphylococcus aureus/metabolismo , Antibacterianos/farmacología , Antibacterianos/uso terapéutico , Antibacterianos/química , Girasa de ADN/metabolismo , Topoisomerasa de ADN IV , Pruebas de Sensibilidad Microbiana
3.
J Med Chem ; 66(2): 1380-1425, 2023 01 26.
Artículo en Inglés | MEDLINE | ID: mdl-36634346

RESUMEN

We have developed compounds with a promising activity against Acinetobacter baumannii and Pseudomonas aeruginosa, which are both on the WHO priority list of antibiotic-resistant bacteria. Starting from DNA gyrase inhibitor 1, we identified compound 27, featuring a 10-fold improved aqueous solubility, a 10-fold improved inhibition of topoisomerase IV from A. baumannii and P. aeruginosa, a 10-fold decreased inhibition of human topoisomerase IIα, and no cross-resistance to novobiocin. Cocrystal structures of 1 in complex with Escherichia coli GyrB24 and (S)-27 in complex with A. baumannii GyrB23 and P. aeruginosa GyrB24 revealed their binding to the ATP-binding pocket of the GyrB subunit. In further optimization steps, solubility, plasma free fraction, and other ADME properties of 27 were improved by fine-tuning of lipophilicity. In particular, analogs of 27 with retained anti-Gram-negative activity and improved plasma free fraction were identified. The series was found to be nongenotoxic, nonmutagenic, devoid of mitochondrial toxicity, and possessed no ion channel liabilities.


Asunto(s)
Acinetobacter baumannii , Inhibidores de Topoisomerasa II , Humanos , Inhibidores de Topoisomerasa II/farmacología , Inhibidores de Topoisomerasa II/química , Pseudomonas aeruginosa/metabolismo , Acinetobacter baumannii/metabolismo , Antibacterianos/farmacología , Antibacterianos/química , Escherichia coli/metabolismo , Benzotiazoles , Pruebas de Sensibilidad Microbiana , Girasa de ADN/metabolismo
4.
Nat Cancer ; 3(2): 156-172, 2022 02.
Artículo en Inglés | MEDLINE | ID: mdl-35228749

RESUMEN

The folate metabolism enzyme MTHFD2 (methylenetetrahydrofolate dehydrogenase/cyclohydrolase) is consistently overexpressed in cancer but its roles are not fully characterized, and current candidate inhibitors have limited potency for clinical development. In the present study, we demonstrate a role for MTHFD2 in DNA replication and genomic stability in cancer cells, and perform a drug screen to identify potent and selective nanomolar MTHFD2 inhibitors; protein cocrystal structures demonstrated binding to the active site of MTHFD2 and target engagement. MTHFD2 inhibitors reduced replication fork speed and induced replication stress followed by S-phase arrest and apoptosis of acute myeloid leukemia cells in vitro and in vivo, with a therapeutic window spanning four orders of magnitude compared with nontumorigenic cells. Mechanistically, MTHFD2 inhibitors prevented thymidine production leading to misincorporation of uracil into DNA and replication stress. Overall, these results demonstrate a functional link between MTHFD2-dependent cancer metabolism and replication stress that can be exploited therapeutically with this new class of inhibitors.


Asunto(s)
Aminohidrolasas , Leucemia Mieloide Aguda , Aminohidrolasas/genética , Humanos , Hidrolasas , Leucemia Mieloide Aguda/tratamiento farmacológico , Metilenotetrahidrofolato Deshidrogenasa (NADP)/genética , Enzimas Multifuncionales/genética , Timidina
5.
FASEB Bioadv ; 2(8): 453-463, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32821877

RESUMEN

PGC1α-Related Coactivator (PRC) is a transcriptional coactivator promoting cytokine expression in vitro in response to mitochondrial injury and oxidative stress, however, its physiological role has remained elusive. Herein we investigate aspects of the immune response function of PRC, first in an in vivo thioacetamide (TAA)-induced mouse model of drug-induced liver injury (DILI), and subsequently in vitro in human monocytes, HepG2, and dendritic (DC) cells. TAA treatment resulted in the dose-dependent induction of PRC mRNA and protein, both of which were shown to correlate with liver injury markers. Conversely, an adenovirus-mediated knockdown of PRC attenuated this response, thereby reducing hepatic cytokine mRNA expression and monocyte infiltration. Subsequent in vitro studies with conditioned media from HepG2 cells overexpressing PRC, activated human monocytes and monocyte-derived DC, demonstrated up to 20% elevated expression of CD86, CD40, and HLA-DR. Similarly, siRNA-mediated knockdown of PRC abolished this response in oligomycin stressed HepG2 cells. A putative mechanism was suggested by the co-immunoprecipitation of Signal Transducer and Activator of Transcription 1 (STAT1) with PRC, and induction of a STAT-dependent reporter. Furthermore, PRC co-activated an NF-κB-dependent reporter, indicating interaction with known major inflammatory factors. In summary, our study indicates PRC as a novel factor modulating inflammation in DILI.

6.
Biomarkers ; 22(5): 461-469, 2017 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-27978773

RESUMEN

CONTEXT: There is an ongoing search for specific and translational biomarkers of drug-induced liver injury (DILI). MicroRNA-122 (miR-122) has previously shown potential as a sensitive, specific, and translational biomarker of DILI in both rodent, and human studies. OBJECTIVE: To build on previous work within the field, we examined biomarker kinetics in a rat model of acetaminophen (APAP)-induced liver injury to confirm the sensitivity, and specificity of miR-122 and glutamate dehydrogenase (GLDH). MATERIALS AND METHODS: qRT-PCR and a standard enzymatic assay were used for biomarker analysis. RESULTS: Both miR-122 and GLDH were demonstrated to be more readily-detectable biomarkers of APAP-DILI than alanine aminotransferase (ALT). Peak levels for all biomarkers were detected at 2 days after APAP. At day 3, miR-122 had returned to baseline; however, other biomarkers remained elevated between 3 and 4 days. We were also able to demonstrate that, although miR-122 is present in greater quantities in exosome-free form, both exosome-bound and non-vesicle bound miR-122 are released in a similar profile throughout the course of DILI. DISCUSSION AND CONCLUSIONS: Together, this study demonstrates that both GLDH and miR-122 could be used during preclinical drug-development as complementary biomarkers to ALT to increase the chance of early detection of hepatotoxicity.


Asunto(s)
Enfermedad Hepática Inducida por Sustancias y Drogas/diagnóstico , Acetaminofén , Alanina Transaminasa , Animales , Biomarcadores/sangre , Diagnóstico Precoz , Glutamato Deshidrogenasa/sangre , MicroARNs/sangre , Farmacocinética , Ratas , Sensibilidad y Especificidad
7.
Int J Mol Med ; 38(3): 961-8, 2016 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-27430334

RESUMEN

Alanine aminotransferase (ALT) in serum is the standard biomarker for liver injury. We have previously described a clinical trial with a novel selective peroxisome proliferator-activated receptor α (PPARα) agonist (AZD4619), which unexpectedly caused increased serum levels of ALT in treated individuals without any other evidence of liver injury. We pinpointed a plausible mechanism through which AZD4619 could increase serum ALT levels; namely through the PPARα-specific activation of the human ALT1 gene at the transcriptional level. In the present study, we present data from the preceding rat toxicity study, demonstrating that AZD4619 had no effect on rat serum ALT activity levels, and further experiments were performed to elucidate the mechanisms responsible for this species-related difference. Our results revealed that AZD4619 increased ALT1 protein expression in a dose-dependent manner in human, but not in rat primary hepatocytes. Cloning of the human and rat ALT1 promoters into luciferase vectors confirmed that AZD4619 induced only the human, but not the rat ALT1 gene promoter in a dose-dependent manner. In PPARα-GAL4 reporter gene assays, AZD4619 was >100-fold more potent on the human vs. rat PPARα levels, explaining the differences in induction of the ALT1 gene between the species at the concentration range tested. These data demonstrate the usefulness of the human and rat ALT1 reporter gene assays for testing future drug candidates at the preclinical stage. In drug discovery projects, these assays elucidate whether elevations in ALT levels observed in vivo or in the clinic are due to metabolic effects rather than a toxic event in the liver.


Asunto(s)
Alanina Transaminasa/metabolismo , Hepatocitos/efectos de los fármacos , PPAR alfa/agonistas , Propionatos/farmacología , Sulfonas/farmacología , Xenobióticos/farmacología , Alanina Transaminasa/sangre , Alanina Transaminasa/genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Western Blotting , Línea Celular Tumoral , Células Cultivadas , Femenino , Expresión Génica/efectos de los fármacos , Hepatocitos/metabolismo , Humanos , Luciferasas/genética , Luciferasas/metabolismo , Masculino , Regiones Promotoras Genéticas/genética , Ratas Wistar , Homología de Secuencia de Aminoácido , Homología de Secuencia de Ácido Nucleico , Especificidad de la Especie
8.
Arch Toxicol ; 88(7): 1427-37, 2014 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-24912781

RESUMEN

Human-induced pluripotent stem cell-derived hepatocytes (hiPSC-Hep) hold great potential as an unlimited cell source for toxicity testing in drug discovery research. However, little is known about mechanisms of compound toxicity in hiPSC-Hep. In this study, modified mRNA was used to reprogram foreskin fibroblasts into hiPSC that were differentiated into hiPSC-Hep. The hiPSC-Hep expressed characteristic hepatic proteins and exhibited cytochrome P450 (CYP) enzyme activities. Next, the hiPSC-Hep, primary cryopreserved human hepatocytes (cryo-hHep) and the hepatic cell lines HepaRG and Huh7 were treated with staurosporine and acetaminophen, and the toxic responses were compared. In addition, the expression of genes regulating and executing apoptosis was analyzed in the different cell types. Staurosporine, an inducer of apoptosis, decreased ATP levels and activated caspases 3 and 7 in all cell types, but to less extent in Huh7. Furthermore, a hierarchical clustering and a principal component analysis (PCA) of the expression of apoptosis-associated genes separated cryo-hHep from the other cell types, while an enrichment analysis of apoptotic pathways identified hiPSC-Hep as more similar to cryo-hHep than the hepatic cell lines. Finally, acetaminophen induced apoptosis in hiPSC-Hep, HepaRG and Huh7, while the compound initiated a direct necrotic response in cryo-hHep. Our results indicate that for studying compounds initiating apoptosis directly hiPSC-Hep may be a good alternative to cryo-hHep. Furthermore, for compounds with more complex mechanisms of toxicity involving metabolic activation, such as acetaminophen, our data suggest that the cause of cell death depends on a balance between factors controlling death signals and the drug-metabolizing capacity.


Asunto(s)
Acetaminofén/toxicidad , Hepatocitos/efectos de los fármacos , Estaurosporina/toxicidad , Pruebas de Toxicidad/métodos , Acetaminofén/metabolismo , Apoptosis/efectos de los fármacos , Diferenciación Celular , Línea Celular , Células Cultivadas , Enfermedad Hepática Inducida por Sustancias y Drogas/diagnóstico , Enfermedad Hepática Inducida por Sustancias y Drogas/etiología , Criopreservación/métodos , Fibroblastos/citología , Prepucio , Hepatocitos/citología , Humanos , Células Madre Pluripotentes Inducidas/citología , Masculino , Análisis de Componente Principal
9.
Liver Int ; 34(3): 367-78, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24118944

RESUMEN

BACKGROUND & AIMS: There is a demand for more sensitive, specific and predictive biomarkers for drug-induced liver injury (DILI) than the gold standard used today, alanine aminotransferase (ALT). The aim of this study was to qualify novel DILI biomarkers (keratin-18 markers M65/M30, microRNA-122, glutamate dehydrogenase and alpha-foetoprotein) in human DILI. METHODS: Levels of the novel biomarkers were measured by enzyme-linked immunosorbent assay or real-time quantitative reverse-transcription PCR (qRT-PCR) in two human DILI cohorts: a human volunteer study with acetaminophen and a human immunodeficiency virus (HIV)/tuberculosis (TB) study. RESULTS: In the acetaminophen study, serum M65 and microRNA-122 levels were significantly increased at an earlier time point than ALT. Furthermore, the maximal elevation of M65 and microRNA-122 exceeded the increase in ALT. In the HIV/TB study, all the analysed novel biomarkers increased after 1 week of treatment. In contrast to ALT, the novel biomarkers remained stable in a human cohort with exercise-induced muscular injury. CONCLUSIONS: M65 and microRNA-122 are potential biomarkers of DILI superior to ALT with respect to sensitivity and specificity.


Asunto(s)
Alanina Transaminasa/sangre , Biomarcadores/sangre , Enfermedad Hepática Inducida por Sustancias y Drogas/diagnóstico , Queratina-18/sangre , MicroARNs/sangre , Fragmentos de Péptidos/sangre , Enfermedad Hepática Inducida por Sustancias y Drogas/sangre , Estudios de Cohortes , Ensayo de Inmunoadsorción Enzimática , Humanos , Sensibilidad y Especificidad
10.
Int J Mol Med ; 30(5): 1241-9, 2012 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-22922605

RESUMEN

Serum alanine aminotransferase (ALT) is used as a clinical marker to detect hepatic damage and hepatoxicity. Two isoforms of ALT have been identified, ALT1 and ALT2, which have identical enzymatic capacities and are detected simultaneously in human serum/plasma using classical clinical chemical assays. Differences exist in the expression patterns of the ALT1 and ALT2 proteins in different organs which suggest that changes in the proportion of ALT1 and ALT2 in plasma may arise and reflect damage to different human organs. However, this has not been previously studied due to the lack of a selective methodology that can quantify both ALT1 and ALT2 isoforms in the total ALT activity normally measured in clinical samples. To the best of our knowledge, our current study reveals for the first time, that under 3 different conditions of liver damage (non-alcoholic fatty liver disease, hepatitis C and during liver surgery) the leakage of ALT1 activity into plasma greatly exceeds that of ALT2, and that the measurement of ALT1 during liver damage is equal to the measurement of total ALT activity. By contrast, during skeletal muscle injury, induced in volunteers by physical exertion, the leakage of ALT2 exceeds that of ALT1 and the proportion of circulating ALT isoforms changes accordingly. The ALT isoform changes occurring in plasma reflect previously demonstrated relative contents of ALT1 and ALT2 activities in human liver and skeletal muscle. These data suggest that assessing the percentage contribution of ALT1 and ALT2 activities to total ALT activity in plasma may distinguish hepatic from extrahepatic injury using the same standard analytical platform.


Asunto(s)
Alanina Transaminasa/sangre , Hígado Graso/sangre , Hepatitis C Crónica/sangre , Adulto , Anciano , Biomarcadores/sangre , Estudios de Casos y Controles , Diagnóstico Diferencial , Hígado Graso/patología , Femenino , Hepatitis C Crónica/patología , Humanos , Hígado/enzimología , Hígado/patología , Hígado/cirugía , Neoplasias Hepáticas/sangre , Neoplasias Hepáticas/cirugía , Masculino , Persona de Mediana Edad , Músculo Esquelético/patología , Enfermedad del Hígado Graso no Alcohólico , Esfuerzo Físico , Isoformas de Proteínas/sangre , Adulto Joven
11.
Toxicol Pathol ; 39(2): 325-36, 2011 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-21270424

RESUMEN

The dual peroxisome-proliferator-activated receptor (PPAR) α/γ agonist tesaglitazar has been shown to produce fibrosarcomas in rats. Here, the authors studied morphology, proliferation, differentiation, and inflammation markers in adipose tissue from rats exposed to 1, 3, or 10 µmol/kg tesaglitazar for 2 or 12 weeks, including recovery groups (12 weeks treatment followed by 12 weeks recovery), and 3 or 10 µmol/kg tesaglitazar for 24 weeks. Subcutaneous white and brown fat revealed reversible dose-related histopathological alterations and after 12 and 24 weeks developed areas of thickened skin (fatty lumps). There was a dose-dependent increase in proliferation of interstitial cells in white and brown fat as shown by increased mitotic index in all dose groups after 2 weeks. This was limited to the high dose after 12 and 24 weeks in white fat. Gene expression analyses showed that while tesaglitazar induced differentiation of adipose tissue characterized with a switch in cyclin D1 and D3 mRNA by 12 weeks, longer exposure at high doses reversed this differentiation concurrent with a reappearance of early adipocyte and inflammatory markers. These data suggest that sustained increased turnover of mesenchymal cells in adipose tissues, concomitant with onset of inflammation and fibrosis, drives development of fibrosarcomas in rats treated with tesaglitazar.


Asunto(s)
Tejido Adiposo/efectos de los fármacos , Fibrosarcoma/inducido químicamente , PPAR alfa/agonistas , PPAR gamma/agonistas , Adipocitos , Tejido Adiposo/metabolismo , Tejido Adiposo/patología , Alcanosulfonatos/sangre , Alcanosulfonatos/metabolismo , Análisis de Varianza , Animales , Biomarcadores , Proliferación Celular , Fibrosarcoma/patología , Expresión Génica , Inflamación/inducido químicamente , Masculino , Fenilpropionatos/sangre , Fenilpropionatos/metabolismo , ARN Mensajero/metabolismo , Ratas , Ratas Wistar
12.
Biomarkers ; 14(8): 572-86, 2009 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-19780643

RESUMEN

Ximelagatran was developed for the prevention and treatment of thromboembolic conditions. However, in long-term clinical trials with ximelagatran, the liver injury marker, alanine aminotransferase (ALT) increased in some patients. Analysis of plasma samples from 134 patients was carried out using proteomic and metabolomic platforms, with the aim of finding predictive biomarkers to explain the ALT elevation. Analytes that were changed after ximelagatran treatment included 3-hydroxybutyrate, pyruvic acid, CSF1R, Gc-globulin, L-glutamine, protein S and alanine, etc. Two of these analytes (pyruvic acid and CSF1R) were studied further in human cell cultures in vitro with ximelagatran. A systems biology approach applied in this study proved to be successful in generating new hypotheses for an unknown mechanism of toxicity.


Asunto(s)
Alanina Transaminasa/sangre , Azetidinas/efectos adversos , Bencilaminas/efectos adversos , Biomarcadores/análisis , Enfermedad Hepática Inducida por Sustancias y Drogas/etiología , Adenosina Trifosfato/metabolismo , Proteínas Sanguíneas/metabolismo , Células Cultivadas , Ensayos Clínicos como Asunto , Proteína de Unión al Complemento C4b , Femenino , Hepatocitos/efectos de los fármacos , Hepatocitos/metabolismo , Antígenos de Histocompatibilidad/sangre , Humanos , Macrófagos/fisiología , Masculino , Metabolómica/métodos , Proteína S , Proteómica/métodos , Ácido Pirúvico/metabolismo , Receptor de Factor Estimulante de Colonias de Macrófagos/sangre , Biología de Sistemas , Células Tumorales Cultivadas , Proteína de Unión a Vitamina D/sangre
13.
Int J Mol Med ; 23(5): 621-31, 2009 May.
Artículo en Inglés | MEDLINE | ID: mdl-19360321

RESUMEN

Serum alanine aminotransferase (ALT) is used as a clinical marker of hepatotoxicity. Three forms of human ALT have been identified, ALT1 and 2 and an alternative splice variant of ALT2 (herein called ALT2_2). The standard ALT activity assay does not discriminate between ALT from different organs, or the isoforms measured in the plasma. Here, we show that ALT1 and 2 possess similar enzymatic activity for alanine and pyruvate but with different Km and kcat values, while recombinant ALT2_2 protein does not possess any enzymatic activity. Isolation of organelles from cultured human skeletal muscle cells, showed localisation of ALT2 to the mitochondrial fraction and endoplasmatic reticulum (ER), but not to the cytosol. In human hepatocytes, on the other hand, ALT1 was only localised to the cytosol and ER, with no detection in mitochondria. ALT2 was not detected in cultured human hepatocytes, liver extract or tissue using Western blotting or immunohistochemistry. The islet of Langerhans and cardiomyocytes were other examples of cells with high expression of catalytic ALT2. A clinical method for selective measurement of ALT1 and 2 in human plasma is described, and both ALT1 and 2 were immunoprecipitated from human plasma and structurally detected using Western blotting techniques.


Asunto(s)
Alanina Transaminasa/análisis , Alanina Transaminasa/sangre , Hígado/metabolismo , Mitocondrias/metabolismo , Músculo Esquelético/metabolismo , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Alanina Transaminasa/metabolismo , Células Cultivadas , Femenino , Hepatocitos/metabolismo , Humanos , Masculino , Persona de Mediana Edad , Plasma/química , Plasma/metabolismo , Proteínas Recombinantes/metabolismo , Suero/metabolismo , Especificidad por Sustrato , Adulto Joven
14.
Int J Mol Med ; 21(6): 819-24, 2008 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-18506377

RESUMEN

The peroxisome proliferator-activated receptor delta (PPARdelta) is a transcription factor that regulates genes of importance in lipid and glucose metabolism. ApoA-II is one of the major proteins of the HDL-particle. The aim of this study was to investigate the regulation of apoA-II gene expression by PPARdelta. Treatment of HepG2 cells with the PPARdelta specific agonist GW501516 increased apoA-II mRNA expression. Likewise, reporter gene assays using a construct containing 2.7 kb of the proximal apoA-II promoter showed increased activity after treatment with GW501516, both in HepG2 and in HuH-7 cells. Mutation of two putative PPAR response elements (PPREs) in this region showed that the PPRE at position -737/-717 is the functional site. Binding of PPARdelta to this site was confirmed by chromatin immunoprecipitation and gel retardation analyses. In conclusion, PPARdelta increases the expression of the human apoA-II gene in liver cells via a PPRE in the proximal promoter.


Asunto(s)
Apolipoproteína A-II/genética , Expresión Génica/efectos de los fármacos , PPAR delta/agonistas , Tiazoles/farmacología , Apolipoproteína A-II/metabolismo , Secuencia de Bases , Sitios de Unión/genética , Metabolismo de los Hidratos de Carbono/efectos de los fármacos , Carcinoma Hepatocelular/genética , Carcinoma Hepatocelular/metabolismo , Carcinoma Hepatocelular/patología , Línea Celular Tumoral , Inmunoprecipitación de Cromatina/métodos , Ensayo de Cambio de Movilidad Electroforética/métodos , Humanos , Metabolismo de los Lípidos/efectos de los fármacos , Mutación , PPAR delta/genética , PPAR delta/metabolismo , Regiones Promotoras Genéticas/genética , Unión Proteica/efectos de los fármacos , Elementos de Respuesta/genética , Homología de Secuencia de Ácido Nucleico
15.
Toxicol Appl Pharmacol ; 231(1): 1-9, 2008 Aug 15.
Artículo en Inglés | MEDLINE | ID: mdl-18455211

RESUMEN

In this work, we investigated a potential mechanism behind the observation of increased aminotransferase levels in a phase I clinical trial using a lipid-lowering drug, the peroxisome proliferator-activated receptor (PPAR) alpha agonist, AZD4619. In healthy volunteers treated with AZD4619, serum alanine aminotransferase (ALT) and aspartate aminotransferase (AST) activities were elevated without an increase in other markers for liver injury. These increases in serum aminotransferases have previously been reported in some patients receiving another PPARalpha agonist, fenofibrate. In subsequent in vitro studies, we observed increased expression of ALT1 protein and mRNA in human hepatocytes after treatment with fenofibric acid. The PPAR effect on ALT1 expression was shown to act through a direct transcriptional mechanism involving at least one PPAR response element (PPRE) in the proximal ALT1 promoter, while no effect of fenofibrate and AZD4619 was observed on the ALT2 promoter. Binding of PPARs to the PPRE located at -574 bp from the transcriptional start site was confirmed on both synthetic oligonucleotides and DNA in hepatocytes. These data show that intracellular ALT expression is regulated by PPAR agonists and that this mechanism might contribute to increased ALT activity in serum.


Asunto(s)
Alanina Transaminasa/biosíntesis , Enfermedad Hepática Inducida por Sustancias y Drogas/enzimología , Regulación Enzimológica de la Expresión Génica/fisiología , Hepatocitos/enzimología , PPAR alfa/agonistas , PPAR alfa/fisiología , Adulto , Alanina Transaminasa/genética , Biomarcadores , Cromatina/genética , Ensayo de Cambio de Movilidad Electroforética , Fenofibrato/análogos & derivados , Fenofibrato/farmacología , Regulación Enzimológica de la Expresión Génica/genética , Humanos , Hipolipemiantes/efectos adversos , Hipolipemiantes/farmacología , Inmunoprecipitación , Luciferasas/genética , Masculino , Mutagénesis/efectos de los fármacos , Plásmidos/genética , Regiones Promotoras Genéticas/genética , Regiones Promotoras Genéticas/fisiología , ARN/biosíntesis , ARN/aislamiento & purificación , Elementos de Respuesta/genética , Elementos de Respuesta/fisiología , Transfección
16.
Toxicol In Vitro ; 22(3): 730-46, 2008 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-18191936

RESUMEN

OBJECTIVE: To investigate the possible mechanisms underlying the liver enzyme elevations seen during clinical studies of long-term treatment (>35 days) with ximelagatran, and investigate the usefulness of pre-clinical in vitro systems to predict drug-induced liver effects. METHODS: Ximelagatran and its metabolites were tested for effects on cell viability, mitochondrial function, formation of reactive metabolites and reactive oxygen species, protein binding, and induction of alanine aminotransferase (ALT) and aspartate aminotransferase (AST) gene expression or nuclear orphan receptors. Experimental systems included fresh and cryopreserved hepatocytes, human hepatoma cell lines (HepG2 and HuH-7) and subcellular human liver fractions. RESULTS: Loss of cell viability was only seen in HepG2 cells at ximelagatran concentrations 100 microM and in cryopreserved human hepatocytes at 300 microM, while HuH-7 cells were not affected by 24 h exposure at up to 300 microM ximelagatran. Calcium homeostasis was not affected in HepG2 cells exposed to ximelagatran up to 300 microM for 15 min. There was no evidence for the formation of reactive metabolites when cell systems were exposed to ximelagatran. ALT and AST expression in human hepatoma cell lines were also unchanged by ximelagatran. Mitochondrial functions such as respiration, opening of the transition pore, mitochondrial membrane depolarization and beta-oxidation were not affected by ximelagatran or its metabolites. CONCLUSION: Ximelagatran at concentrations considerably higher than that found in plasma following therapeutic dosing had little or no effect on cellular functions studied in vitro. The in vitro studies therefore did not elucidate the mechanism by which ximelagatran induces liver effects in humans, possibly because of limitations in the experimental systems not reflecting characteristics of the human hepatocyte, restricted exposure time, or because the primary mechanism for the observed clinical liver effects is not on the parenchymal liver cell.


Asunto(s)
Azetidinas/toxicidad , Bencilaminas/toxicidad , Enfermedad Hepática Inducida por Sustancias y Drogas/patología , Fibrinolíticos/toxicidad , Trombina/antagonistas & inhibidores , Adenosina Trifosfato/metabolismo , Animales , Antioxidantes/metabolismo , Apoptosis/efectos de los fármacos , Azetidinas/metabolismo , Bencilaminas/metabolismo , Calcio/metabolismo , Carcinoma Hepatocelular/patología , Línea Celular , Cromatografía Liquida , Criopreservación , Fibrinolíticos/metabolismo , Citometría de Flujo , Hepatocitos/efectos de los fármacos , Humanos , Técnicas In Vitro , Espectrometría de Masas , Mitocondrias Hepáticas/efectos de los fármacos , Mitocondrias Hepáticas/metabolismo , Necrosis , Permeabilidad , Valor Predictivo de las Pruebas , Ratas , Especies Reactivas de Oxígeno/metabolismo , Fracciones Subcelulares/efectos de los fármacos , Fracciones Subcelulares/metabolismo
17.
Arch Biochem Biophys ; 466(1): 66-77, 2007 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-17826732

RESUMEN

Serum alanine aminotransferase (ALT) is used as a clinical marker of hepatotoxicity. Two forms of ALT have been identified, ALT1 and ALT2, encoded by separate genes. The cellular and tissue distribution of the different ALT proteins has not been characterized in humans, and their relative contribution to serum is unknown. Here, we describe the development of novel isoenzyme specific ALT1 and ALT2 antibodies and the expression of the enzymes in human cells and organs. In normal human tissue, high expression of ALT1 was found in liver, skeletal muscle and kidney and low levels in heart muscle and not detectable in pancreas. High ALT2 reactivity was detected in heart and skeletal muscle, while no ALT2 expression was found in liver or kidney. Using immunohistochemistry, strong ALT1 reactivity was found in hepatocytes, renaltubular epithelial cells and in salivary gland epithelial cells, while ALT2 was expressed in adrenal gland cortex, neuronal cell bodies, cardiac myocytes, skeletal muscle fibers and endocrine pancreas. Immunoprecipitation using ALT antibodies on normal human serums showed ALT1 to be mainly responsible for basal ALT activity. Together, the results points to a differential expression of ALT1 and ALT2 in human organs and substantiate a need for investigations regarding the possible impacts on ALT measurements.


Asunto(s)
Alanina Transaminasa/metabolismo , Perfilación de la Expresión Génica/métodos , Inmunoensayo/métodos , Alanina Transaminasa/inmunología , Anticuerpos/inmunología , Análisis Químico de la Sangre , Humanos , Isoenzimas/inmunología , Isoenzimas/metabolismo , Especificidad de Órganos , Distribución Tisular
18.
Int J Mol Med ; 17(1): 45-52, 2006 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-16328010

RESUMEN

Peroxisome proliferator-activated receptors (PPARs) alpha, delta and gamma are nuclear transcription factors that control key genes involved in fatty acid metabolism and energy homeostasis. Little is known about PPAR activation in vivo and the existence of overlapping functions between PPARalpha, -delta and -gamma. As skeletal muscle is an important site for insulin action and acts as a significant sensor for life-style-induced influences in whole-body energy metabolism, we investigated the expression of PPARalpha, -delta and -gamma in rat skeletal muscle in response to exercise after four- and twelve-weeks of high-fat feeding, respectively. PPARalpha mRNA expression in skeletal muscle increased in parallel with other signs of developing metabolic syndrome such as increased visceral fat pad volymes, plasma free fatty acids and muscle triglyceride concentrations. PPARalpha mRNA expression was up-regulated 3-fold after four weeks of high-fat feeding (p<0.01). Exercise reversed the high-fat induced increase in PPARalpha expression in young lean rats (p<0.05), but did not change the PPARalpha, -delta and -gamma expression in the skeletal muscle in the normal nutritional state. The increase in PPARalpha expression declined during a longer term of high-fat feeding. In contrast, exercise increased PPARdelta mRNA and protein expression 3- to 6-fold in skeletal muscle after longer-term high-fat feeding (p<0.05). This effect was accompanied by a reduction in skeletal muscle fat content. These findings suggest that parallel activation of PPARalpha and -delta expression in skeletal muscle may be an important adaptive mechanism in response to increased fatty acid loads in young, lean animals, protecting them from insulin resistance, whereas exercise might be needed to mediate the same positive effects in older animals.


Asunto(s)
Dieta , Músculo Esquelético/fisiología , PPAR alfa/metabolismo , PPAR delta/metabolismo , Condicionamiento Físico Animal , Isoformas de Proteínas/metabolismo , Tejido Adiposo/metabolismo , Envejecimiento/fisiología , Animales , Análisis Químico de la Sangre , Grasas de la Dieta , Femenino , Resistencia a la Insulina/fisiología , Síndrome Metabólico/metabolismo , Datos de Secuencia Molecular , Músculo Esquelético/citología , PPAR alfa/genética , PPAR delta/genética , Isoformas de Proteínas/genética , Proteínas Quinasas/genética , Proteínas Quinasas/metabolismo , ARN Mensajero/metabolismo , Ratas , Ratas Wistar
19.
Biochem Biophys Res Commun ; 308(2): 361-8, 2003 Aug 22.
Artículo en Inglés | MEDLINE | ID: mdl-12901877

RESUMEN

Cyclooxygenase-2 (COX-2) has been suggested to be associated with carcinogenesis. Recently, many studies have shown increased expression of COX-2 in a variety of human malignancies, including hepatocellular carcinoma (HCC). Therefore, it becomes important to know more about what determines COX-2 expression. In this work, we have studied the effect of PPARdelta activation on COX-2 expression using a selective agonist (GW501516) in human hepatocellular carcinoma (HepG2) cells. Activation of PPARdelta resulted in increased COX-2 mRNA and protein expression. The mechanism behind the induction seems to be increased activity of the proximal promoter of the COX-2 gene, spanning nucleotides -327 to +59. The increased COX-2 protein expression and promoter activity induced by the GW501516 was also confirmed in the monocytic cell line THP-1. Induced levels of COX-2 have previously been associated with resistance to apoptosis and increased cell proliferation in many cell types. In HepG2 cells, we observed a dose-dependent increase in cell number by GW501516 treatment for 72h. The levels of PCNA, used as an indicator of cell division were induced, and the cell survival promoting complex p65 (NF-kappaB) was phosphorylated under GW501516 treatment. We conclude that PPARdelta activation in HepG2 cells results in induced COX-2 expression and increased cellular proliferation. These results may suggest that PPARdelta plays an important role in the development of HCC by modulating expression of COX-2.


Asunto(s)
Carcinoma Hepatocelular/genética , Carcinoma Hepatocelular/metabolismo , Isoenzimas/genética , Neoplasias Hepáticas/genética , Neoplasias Hepáticas/metabolismo , Prostaglandina-Endoperóxido Sintasas/genética , Receptores Citoplasmáticos y Nucleares/metabolismo , Factores de Transcripción/metabolismo , Carcinoma Hepatocelular/patología , División Celular/efectos de los fármacos , Ciclooxigenasa 2 , Regulación Enzimológica de la Expresión Génica , Regulación Neoplásica de la Expresión Génica , Humanos , Isoenzimas/metabolismo , Neoplasias Hepáticas/patología , Proteínas de la Membrana , Regiones Promotoras Genéticas , Prostaglandina-Endoperóxido Sintasas/metabolismo , Receptores Citoplasmáticos y Nucleares/agonistas , Tiazoles/farmacología , Factores de Transcripción/agonistas , Células Tumorales Cultivadas
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